Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0935

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,077,733	+		Echvi_0934	0.73	+1.6
1,077,733	+		Echvi_0934	0.73	+0.2
1,077,733	+		Echvi_0934	0.73	+0.0
1,077,734	-		Echvi_0934	0.73	+0.3
1,077,977	+		Echvi_0934	0.87	+1.6
1,077,977	+		Echvi_0934	0.87	+0.7
1,077,979	+		Echvi_0934	0.87	+0.8
1,077,979	+		Echvi_0934	0.87	-1.6
1,077,980	-		Echvi_0934	0.87	+3.6
1,078,086	+				-0.7
1,078,185	+				+3.2
1,078,253	+				+0.3
1,078,297	+				-2.0
1,078,298	-				+0.6
1,078,308	+				-0.8
1,078,308	+				-0.8
1,078,308	+				-1.4
1,078,309	-				+0.3
1,078,309	-				+1.3
1,078,318	+				+0.4
1,078,318	+				-2.2
1,078,318	+				+0.1
1,078,318	+				+1.7
1,078,318	+				-0.7
1,078,318	+				+0.7
1,078,318	+				-0.5
1,078,321	+				+0.6
1,078,321	+				+0.0
1,078,383	+				-0.6
1,078,424	+				-1.8
1,078,424	+				+0.2
1,078,424	+				-0.9
1,078,489	+				+0.6
1,078,490	-				+0.2
1,078,561	-				+0.2
1,078,578	-				+1.0
1,078,654	-				-0.1
1,078,747	-				+1.6
1,078,892	+		Echvi_0935	0.51	-0.2
1,078,892	+		Echvi_0935	0.51	+0.0
1,078,892	+		Echvi_0935	0.51	+0.4
1,078,909	+		Echvi_0935	0.56	+1.9
1,078,909	+		Echvi_0935	0.56	+0.9
1,078,910	-		Echvi_0935	0.56	+1.0
1,078,913	+		Echvi_0935	0.57	-1.2
1,079,003	+		Echvi_0935	0.84	-0.2
1,079,004	-		Echvi_0935	0.84	+0.7
1,079,004	-		Echvi_0935	0.84	+1.3
1,079,004	-		Echvi_0935	0.84	+0.4
1,079,004	-		Echvi_0935	0.84	+0.1
1,079,030	+				+0.5
1,079,053	-				-0.6
1,079,054	+				-0.5
1,079,066	+				+0.0
1,079,066	+				-0.1
1,079,066	+				+0.2
1,079,066	+				-0.7
1,079,067	-				-0.5
1,079,067	-				-0.5
1,079,067	-				-0.7
1,079,067	-				-0.4
1,079,071	+				+1.9
1,079,135	-				+1.6
1,079,141	+				+0.6
1,079,141	+				-0.0
1,079,141	+				+0.2
1,079,142	-				-1.3
1,079,142	-				+0.6
1,079,142	-				-0.9
1,079,142	-				+1.5
1,079,145	-				+0.0
1,079,181	-				-0.8
1,079,248	+				-0.5
1,079,248	+				+0.4
1,079,248	+				-1.1
1,079,248	+				+1.4
1,079,248	+				+0.6
1,079,249	-				+0.4
1,079,250	+				+0.5
1,079,250	+				+0.1
1,079,251	-				+0.0
1,079,253	-				+0.3
1,079,253	-				+0.4
1,079,253	-				-0.4
1,079,266	-				-1.5
1,079,279	+				+0.7
1,079,280	-				+0.5
1,079,310	-				+0.6
1,079,320	-				+1.2
1,079,320	-				-0.7
1,079,320	-				+0.2
1,079,364	+				-0.4
1,079,364	+				-1.1
1,079,422	+				+0.1
1,079,422	+				-1.6
1,079,423	-				+0.6
1,079,493	-		Echvi_0936	0.14	+0.6
1,079,493	-		Echvi_0936	0.14	-1.6
1,079,496	+		Echvi_0936	0.14	-0.2
1,079,496	+		Echvi_0936	0.14	-0.5
1,079,496	+		Echvi_0936	0.14	-0.0
1,079,496	+		Echvi_0936	0.14	+0.6
1,079,583	+		Echvi_0936	0.20	+1.3
1,079,584	-		Echvi_0936	0.20	+0.8
1,079,592	+		Echvi_0936	0.21	+0.8
1,079,592	+		Echvi_0936	0.21	-1.0
1,079,593	+		Echvi_0936	0.21	-0.1
1,079,622	+		Echvi_0936	0.23	+0.2
1,079,650	+		Echvi_0936	0.25	-1.2
1,079,650	+		Echvi_0936	0.25	+0.5
1,079,650	+		Echvi_0936	0.25	-1.7
1,079,650	+		Echvi_0936	0.25	-0.1
1,079,651	-		Echvi_0936	0.25	+0.2
1,079,651	-		Echvi_0936	0.25	+0.6
1,079,692	+		Echvi_0936	0.28	-1.0
1,079,692	+		Echvi_0936	0.28	+0.3
1,079,692	+		Echvi_0936	0.28	+0.3
1,079,693	-		Echvi_0936	0.28	+0.3
1,079,693	-		Echvi_0936	0.28	-0.2
1,079,696	+		Echvi_0936	0.28	-0.2
1,079,696	+		Echvi_0936	0.28	-1.3
1,079,696	+		Echvi_0936	0.28	-0.9
1,079,696	+		Echvi_0936	0.28	+1.1
1,079,696	+		Echvi_0936	0.28	+0.4
1,079,696	+		Echvi_0936	0.28	+0.2
1,079,696	+		Echvi_0936	0.28	-0.4
1,079,696	+		Echvi_0936	0.28	+0.2
1,079,696	+		Echvi_0936	0.28	+1.5
1,079,696	+		Echvi_0936	0.28	-0.8
1,079,696	+		Echvi_0936	0.28	+0.5
1,079,696	+		Echvi_0936	0.28	-0.3
1,079,696	+		Echvi_0936	0.28	-0.3
1,079,696	+		Echvi_0936	0.28	+0.1
1,079,697	-		Echvi_0936	0.28	+0.6
1,079,697	-		Echvi_0936	0.28	+0.9
1,079,697	-		Echvi_0936	0.28	-1.2
1,079,697	-		Echvi_0936	0.28	+1.6
1,079,697	-		Echvi_0936	0.28	-0.2
1,079,697	-		Echvi_0936	0.28	+1.4
1,079,697	-		Echvi_0936	0.28	-0.3
1,079,697	-		Echvi_0936	0.28	+2.6
1,079,697	-		Echvi_0936	0.28	+1.2
1,079,697	-		Echvi_0936	0.28	+0.4
1,079,697	-		Echvi_0936	0.28	+0.4
1,079,697	-		Echvi_0936	0.28	+0.1
1,079,697	-		Echvi_0936	0.28	+0.1
1,079,697	-		Echvi_0936	0.28	+1.8
1,079,697	-		Echvi_0936	0.28	-0.3
1,079,697	-		Echvi_0936	0.28	+0.5
1,079,697	-		Echvi_0936	0.28	+0.1
1,079,697	-		Echvi_0936	0.28	-0.5
1,079,697	-		Echvi_0936	0.28	+0.4
1,079,698	+		Echvi_0936	0.28	+1.1
1,079,698	+		Echvi_0936	0.28	-1.0
1,079,699	-		Echvi_0936	0.28	+0.2
1,079,772	+		Echvi_0936	0.33	-0.8
1,079,806	+		Echvi_0936	0.36	-0.2
1,079,854	+		Echvi_0936	0.39	-0.4
1,079,898	+		Echvi_0936	0.42	-0.2
1,079,977	-		Echvi_0936	0.47	-0.4
1,080,022	+		Echvi_0936	0.50	-0.2
1,080,023	-		Echvi_0936	0.50	-0.2
1,080,023	-		Echvi_0936	0.50	-2.2
1,080,032	+		Echvi_0936	0.51	+1.6
1,080,032	+		Echvi_0936	0.51	-0.4