Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0910

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,036,932	+				+1.1
1,036,959	-				+0.4
1,037,001	+				+3.9
1,037,002	-				+0.5
1,037,002	-				+0.0
1,037,008	+				-0.4
1,037,009	+				+0.8
1,037,009	+				+1.0
1,037,047	+				+0.6
1,037,089	+				-0.4
1,037,089	+				-0.5
1,037,089	+				-1.5
1,037,089	+				-0.7
1,037,089	+				-0.3
1,037,089	+				-2.4
1,037,090	-				-0.5
1,037,090	-				+0.9
1,037,090	-				+0.3
1,037,141	+				-1.3
1,037,142	-				-0.1
1,037,142	-				+0.3
1,037,163	-				+0.3
1,037,175	+				+0.0
1,037,175	+				+0.4
1,037,176	-				+1.6
1,037,176	-				-1.7
1,037,176	-				-1.1
1,037,179	+				-0.6
1,037,199	+				-1.6
1,037,217	+				-0.9
1,037,217	+				+0.6
1,037,218	-				-2.8
1,037,218	-				+1.4
1,037,222	+				+1.2
1,037,222	+				-0.6
1,037,222	+				-2.3
1,037,222	+				+0.1
1,037,223	-				-0.1
1,037,261	-				+0.8
1,037,261	-				+0.6
1,037,279	+				+0.9
1,037,312	+				+2.2
1,037,333	-				+0.2
1,037,352	+		Echvi_0909	0.13	+0.4
1,037,427	+		Echvi_0909	0.26	-0.9
1,037,432	+		Echvi_0909	0.27	+1.6
1,037,433	-		Echvi_0909	0.27	+0.4
1,037,433	-		Echvi_0909	0.27	+0.0
1,037,435	+		Echvi_0909	0.28	-1.7
1,037,435	+		Echvi_0909	0.28	-0.9
1,037,474	+		Echvi_0909	0.34	-0.5
1,037,474	+		Echvi_0909	0.34	-0.3
1,037,474	+		Echvi_0909	0.34	-1.0
1,037,474	+		Echvi_0909	0.34	+0.0
1,037,474	+		Echvi_0909	0.34	-0.4
1,037,474	+		Echvi_0909	0.34	-2.7
1,037,474	+		Echvi_0909	0.34	-3.4
1,037,475	-		Echvi_0909	0.35	+0.3
1,037,475	-		Echvi_0909	0.35	+1.6
1,037,475	-		Echvi_0909	0.35	-0.2
1,037,475	-		Echvi_0909	0.35	-0.6
1,037,475	-		Echvi_0909	0.35	-0.1
1,037,475	-		Echvi_0909	0.35	-1.6
1,037,475	-		Echvi_0909	0.35	-0.3
1,037,542	+		Echvi_0909	0.46	-1.0
1,037,542	+		Echvi_0909	0.46	+0.8
1,037,542	+		Echvi_0909	0.46	-0.6
1,037,542	+		Echvi_0909	0.46	-0.4
1,037,544	+		Echvi_0909	0.47	-0.1
1,037,544	+		Echvi_0909	0.47	-0.2
1,037,545	-		Echvi_0909	0.47	-0.1
1,037,629	+		Echvi_0909	0.62	+0.8
1,037,629	+		Echvi_0909	0.62	-0.2
1,037,630	-		Echvi_0909	0.62	-0.5
1,037,630	-		Echvi_0909	0.62	-0.7
1,037,630	-		Echvi_0909	0.62	+0.8
1,037,666	+		Echvi_0909	0.68	-0.2
1,037,668	+		Echvi_0909	0.68	-0.1
1,037,668	+		Echvi_0909	0.68	-1.0
1,037,669	-		Echvi_0909	0.69	+0.6
1,037,669	-		Echvi_0909	0.69	-0.7
1,037,669	-		Echvi_0909	0.69	+0.6
1,037,686	+		Echvi_0909	0.72	-1.3
1,037,686	+		Echvi_0909	0.72	-1.2
1,037,687	-		Echvi_0909	0.72	+1.2
1,037,687	-		Echvi_0909	0.72	-0.5
1,037,687	-		Echvi_0909	0.72	-0.0
1,037,687	-		Echvi_0909	0.72	+0.1
1,037,691	+		Echvi_0909	0.72	-2.1
1,037,691	+		Echvi_0909	0.72	+0.2
1,037,692	-		Echvi_0909	0.73	-1.2
1,037,692	-		Echvi_0909	0.73	-0.1
1,037,692	-		Echvi_0909	0.73	+0.1
1,037,692	-		Echvi_0909	0.73	-0.3
1,037,704	+		Echvi_0909	0.75	-0.0
1,037,719	+		Echvi_0909	0.77	+0.4
1,037,719	+		Echvi_0909	0.77	+0.8
1,037,720	-		Echvi_0909	0.78	-0.2
1,037,735	+		Echvi_0909	0.80	-0.8
1,037,796	-				-1.0
1,037,796	-				-0.1
1,037,806	-				+1.0
1,037,829	-				-0.8
1,037,829	-				-0.3
1,037,859	+				-0.0
1,037,862	+				-2.3
1,037,862	+				-0.7
1,037,862	+				+1.2
1,037,862	+				-0.6
1,037,863	-				-2.3
1,037,863	-				-0.7
1,037,863	-				-1.4
1,037,863	-				-0.8
1,037,863	-				-0.3
1,037,863	-				-0.2
1,037,865	+				+0.6
1,037,888	+				-0.2
1,037,889	-				-0.3
1,037,919	-				-0.8
1,037,919	-				-1.0
1,037,919	-				-0.9
1,037,930	+		Echvi_0910	0.15	+0.0
1,037,931	-		Echvi_0910	0.15	-1.2
1,037,994	+		Echvi_0910	0.47	+0.1
1,038,046	+		Echvi_0910	0.73	-1.8
1,038,046	+		Echvi_0910	0.73	-0.8
1,038,046	+		Echvi_0910	0.73	-0.1
1,038,091	+				-0.1
1,038,091	+				-0.1
1,038,135	+				-1.6