Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0894

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,022,157	+		Echvi_0893	0.12	-1.2
1,022,158	-		Echvi_0893	0.12	-0.3
1,022,158	-		Echvi_0893	0.12	-1.7
1,022,158	-		Echvi_0893	0.12	+0.1
1,022,162	+		Echvi_0893	0.12	-0.3
1,022,162	+		Echvi_0893	0.12	+0.5
1,022,163	-		Echvi_0893	0.13	-0.4
1,022,163	-		Echvi_0893	0.13	+0.0
1,022,302	+		Echvi_0893	0.34	-0.5
1,022,303	-		Echvi_0893	0.34	-1.6
1,022,432	+		Echvi_0893	0.54	-1.1
1,022,432	+		Echvi_0893	0.54	-0.8
1,022,432	+		Echvi_0893	0.54	+1.5
1,022,433	-		Echvi_0893	0.54	-2.3
1,022,433	-		Echvi_0893	0.54	-2.6
1,022,484	-		Echvi_0893	0.62	-0.7
1,022,484	-		Echvi_0893	0.62	-0.2
1,022,485	+		Echvi_0893	0.62	+0.0
1,022,486	-		Echvi_0893	0.62	-0.3
1,022,486	-		Echvi_0893	0.62	+0.9
1,022,529	+		Echvi_0893	0.69	+0.5
1,022,529	+		Echvi_0893	0.69	+0.1
1,022,613	+		Echvi_0893	0.82	+1.3
1,022,700	+				-0.5
1,022,700	+				-1.5
1,022,771	-				-2.2
1,022,774	+				+0.3
1,022,775	-				-1.0
1,022,778	+				-2.5
1,022,779	-				-1.4
1,022,830	+				-0.8
1,022,895	-				+0.3
1,022,911	+				-3.2
1,022,912	-				+0.8
1,022,912	-				+0.7
1,022,931	+				-2.8
1,022,931	+				-0.4
1,022,932	-				+0.0
1,022,932	-				-0.8
1,022,975	+				-0.4
1,023,014	+				-3.0
1,023,014	+				-0.7
1,023,015	-				+2.8
1,023,017	+				-2.0
1,023,080	+				-1.0
1,023,131	+				-0.3
1,023,153	-				-1.0
1,023,201	-		Echvi_0894	0.18	-1.0
1,023,364	-		Echvi_0894	0.64	-0.4
1,023,364	-		Echvi_0894	0.64	-2.4
1,023,365	+		Echvi_0894	0.64	-1.5
1,023,366	-		Echvi_0894	0.64	-1.9
1,023,373	+		Echvi_0894	0.66	-1.0
1,023,379	+		Echvi_0894	0.68	-2.0
1,023,445	+		Echvi_0894	0.87	+0.1
1,023,477	-				-2.0
1,023,489	+				-1.5
1,023,490	-				-1.0
1,023,516	+				+0.1
1,023,517	-				-1.8
1,023,522	+				-0.5
1,023,541	-				-1.4
1,023,557	+				+0.5
1,023,558	-				+1.3
1,023,563	+				+0.5
1,023,563	+				-0.7
1,023,587	-				-0.8
1,023,700	+		Echvi_0895	0.25	+0.1
1,023,759	-		Echvi_0895	0.38	+0.1
1,023,759	-		Echvi_0895	0.38	+0.0
1,023,769	+		Echvi_0895	0.40	+0.4
1,023,770	-		Echvi_0895	0.40	+1.3
1,023,830	+		Echvi_0895	0.53	-0.2
1,023,831	-		Echvi_0895	0.54	-0.4
1,023,831	-		Echvi_0895	0.54	+0.6
1,023,831	-		Echvi_0895	0.54	+0.8
1,023,831	-		Echvi_0895	0.54	-0.5
1,023,831	-		Echvi_0895	0.54	+0.1
1,023,831	-		Echvi_0895	0.54	+0.4
1,023,832	+		Echvi_0895	0.54	+0.3
1,023,833	-		Echvi_0895	0.54	-0.3
1,023,833	-		Echvi_0895	0.54	-0.1
1,023,839	-		Echvi_0895	0.55	+0.6
1,023,896	+		Echvi_0895	0.68	+2.0
1,023,896	+		Echvi_0895	0.68	-1.3
1,023,897	-		Echvi_0895	0.68	-0.1
1,023,937	-		Echvi_0895	0.77	-1.5
1,023,975	+		Echvi_0895	0.85	+0.0
1,024,016	+				-2.3
1,024,016	+				+0.1
1,024,017	-				-1.4
1,024,017	-				-0.3
1,024,017	-				+0.5
1,024,058	+				-1.7
1,024,058	+				-0.1
1,024,058	+				-0.2
1,024,058	+				-0.4
1,024,059	-				-0.9
1,024,064	-				+2.6
1,024,064	-				-0.7
1,024,069	+				-2.0
1,024,070	-				-0.3
1,024,070	-				-0.4
1,024,071	+				+1.6
1,024,071	+				-1.5
1,024,071	+				+2.2
1,024,071	+				-0.6
1,024,072	-				-2.5
1,024,072	-				-0.5
1,024,149	-		Echvi_0896	0.10	+0.6
1,024,232	+		Echvi_0896	0.24	-0.0
1,024,257	-		Echvi_0896	0.28	-0.7
1,024,408	+		Echvi_0896	0.52	+1.4
1,024,408	+		Echvi_0896	0.52	-1.0
1,024,408	+		Echvi_0896	0.52	-0.1
1,024,409	-		Echvi_0896	0.52	+0.3
1,024,409	-		Echvi_0896	0.52	-0.9
1,024,415	+		Echvi_0896	0.53	-0.4
1,024,415	+		Echvi_0896	0.53	-1.8
1,024,415	+		Echvi_0896	0.53	-0.1
1,024,416	-		Echvi_0896	0.53	-0.9