Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0864 and Echvi_0865 overlap by 26 nucleotides Echvi_0865 and Echvi_0866 are separated by 404 nucleotides
Echvi_0864: Echvi_0864 - hypothetical protein, at 986,920 to 987,156
_0864
Echvi_0865: Echvi_0865 - RNA polymerase sigma factor, sigma-70 family, at 987,131 to 987,733
_0865
Echvi_0866: Echvi_0866 - hypothetical protein, at 988,138 to 988,773
_0866
Position (kb) 986
987
988 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 985.924 kb on + strand at 985.932 kb on + strand at 985.974 kb on + strand at 985.981 kb on + strand at 985.981 kb on + strand at 986.093 kb on - strand at 986.217 kb on - strand at 986.217 kb on - strand at 986.285 kb on + strand at 986.334 kb on + strand at 986.367 kb on + strand at 986.367 kb on + strand at 986.444 kb on + strand at 986.445 kb on - strand at 986.445 kb on - strand at 986.487 kb on - strand at 986.487 kb on - strand at 986.487 kb on - strand at 986.492 kb on - strand at 986.500 kb on + strand at 986.546 kb on + strand at 986.546 kb on + strand at 986.546 kb on + strand at 986.549 kb on + strand at 986.551 kb on + strand at 986.551 kb on + strand at 986.551 kb on + strand at 986.551 kb on + strand at 986.551 kb on + strand at 986.553 kb on + strand at 986.553 kb on + strand at 986.583 kb on - strand at 986.603 kb on + strand at 986.603 kb on + strand at 986.604 kb on - strand at 986.604 kb on - strand at 986.624 kb on - strand at 986.624 kb on - strand at 986.624 kb on - strand at 986.624 kb on - strand at 986.630 kb on + strand at 986.630 kb on + strand at 986.630 kb on + strand at 986.631 kb on - strand at 986.634 kb on + strand at 986.635 kb on - strand at 986.696 kb on - strand at 986.704 kb on + strand at 986.704 kb on + strand at 986.755 kb on + strand at 986.755 kb on + strand at 986.755 kb on + strand at 986.755 kb on + strand at 986.763 kb on + strand at 986.764 kb on - strand at 986.814 kb on + strand at 986.814 kb on + strand at 986.815 kb on - strand at 986.819 kb on - strand at 986.819 kb on - strand at 986.819 kb on - strand at 986.830 kb on + strand at 986.831 kb on - strand at 986.898 kb on - strand at 986.904 kb on + strand at 986.997 kb on + strand, within Echvi_0864 at 987.035 kb on + strand, within Echvi_0864 at 987.036 kb on - strand, within Echvi_0864 at 987.111 kb on - strand, within Echvi_0864 at 987.112 kb on + strand, within Echvi_0864 at 987.112 kb on + strand, within Echvi_0864 at 987.112 kb on + strand, within Echvi_0864 at 987.112 kb on + strand, within Echvi_0864 at 987.112 kb on + strand, within Echvi_0864 at 987.112 kb on + strand, within Echvi_0864 at 987.113 kb on - strand, within Echvi_0864 at 987.113 kb on - strand, within Echvi_0864 at 987.113 kb on - strand, within Echvi_0864 at 987.113 kb on - strand, within Echvi_0864 at 987.113 kb on - strand, within Echvi_0864 at 987.113 kb on - strand, within Echvi_0864 at 987.113 kb on - strand, within Echvi_0864 at 987.113 kb on - strand, within Echvi_0864 at 987.113 kb on - strand, within Echvi_0864 at 987.113 kb on - strand, within Echvi_0864 at 987.113 kb on - strand, within Echvi_0864 at 987.113 kb on - strand, within Echvi_0864 at 987.116 kb on + strand, within Echvi_0864 at 987.116 kb on + strand, within Echvi_0864 at 987.116 kb on + strand, within Echvi_0864 at 987.116 kb on + strand, within Echvi_0864 at 987.116 kb on + strand, within Echvi_0864 at 987.116 kb on + strand, within Echvi_0864 at 987.117 kb on - strand, within Echvi_0864 at 987.117 kb on - strand, within Echvi_0864 at 987.117 kb on - strand, within Echvi_0864 at 987.117 kb on - strand, within Echvi_0864 at 987.117 kb on - strand, within Echvi_0864 at 987.117 kb on - strand, within Echvi_0864 at 987.117 kb on - strand, within Echvi_0864 at 987.117 kb on - strand, within Echvi_0864 at 987.121 kb on + strand, within Echvi_0864 at 987.121 kb on + strand, within Echvi_0864 at 987.121 kb on + strand, within Echvi_0864 at 987.122 kb on - strand, within Echvi_0864 at 987.122 kb on - strand, within Echvi_0864 at 987.156 kb on + strand at 987.156 kb on + strand at 987.157 kb on - strand at 987.168 kb on - strand at 987.168 kb on - strand at 987.236 kb on + strand, within Echvi_0865 at 987.236 kb on + strand, within Echvi_0865 at 987.237 kb on - strand, within Echvi_0865 at 987.237 kb on - strand, within Echvi_0865 at 987.237 kb on - strand, within Echvi_0865 at 987.237 kb on - strand, within Echvi_0865 at 987.237 kb on - strand, within Echvi_0865 at 987.237 kb on - strand, within Echvi_0865 at 987.277 kb on + strand, within Echvi_0865 at 987.277 kb on + strand, within Echvi_0865 at 987.277 kb on + strand, within Echvi_0865 at 987.279 kb on + strand, within Echvi_0865 at 987.279 kb on + strand, within Echvi_0865 at 987.279 kb on + strand, within Echvi_0865 at 987.279 kb on + strand, within Echvi_0865 at 987.280 kb on - strand, within Echvi_0865 at 987.280 kb on - strand, within Echvi_0865 at 987.280 kb on - strand, within Echvi_0865 at 987.280 kb on - strand, within Echvi_0865 at 987.328 kb on + strand, within Echvi_0865 at 987.339 kb on - strand, within Echvi_0865 at 987.403 kb on + strand, within Echvi_0865 at 987.403 kb on + strand, within Echvi_0865 at 987.404 kb on - strand, within Echvi_0865 at 987.433 kb on + strand, within Echvi_0865 at 987.465 kb on + strand, within Echvi_0865 at 987.471 kb on - strand, within Echvi_0865 at 987.471 kb on - strand, within Echvi_0865 at 987.527 kb on - strand, within Echvi_0865 at 987.527 kb on - strand, within Echvi_0865 at 987.528 kb on + strand, within Echvi_0865 at 987.554 kb on - strand, within Echvi_0865 at 987.566 kb on + strand, within Echvi_0865 at 987.567 kb on - strand, within Echvi_0865 at 987.605 kb on + strand, within Echvi_0865 at 987.606 kb on - strand, within Echvi_0865 at 987.608 kb on + strand, within Echvi_0865 at 987.608 kb on + strand, within Echvi_0865 at 987.608 kb on + strand, within Echvi_0865 at 987.608 kb on + strand, within Echvi_0865 at 987.609 kb on - strand, within Echvi_0865 at 987.613 kb on + strand, within Echvi_0865 at 987.613 kb on + strand, within Echvi_0865 at 987.613 kb on + strand, within Echvi_0865 at 987.613 kb on + strand, within Echvi_0865 at 987.614 kb on - strand, within Echvi_0865 at 987.614 kb on - strand, within Echvi_0865 at 987.614 kb on - strand, within Echvi_0865 at 987.616 kb on - strand, within Echvi_0865 at 987.616 kb on - strand, within Echvi_0865 at 987.640 kb on + strand, within Echvi_0865 at 987.640 kb on + strand, within Echvi_0865 at 987.640 kb on + strand, within Echvi_0865 at 987.641 kb on - strand at 987.642 kb on + strand, within Echvi_0865 at 987.642 kb on + strand, within Echvi_0865 at 987.643 kb on - strand, within Echvi_0865 at 987.646 kb on + strand, within Echvi_0865 at 987.646 kb on + strand, within Echvi_0865 at 987.646 kb on + strand, within Echvi_0865 at 987.647 kb on - strand, within Echvi_0865 at 987.647 kb on - strand, within Echvi_0865 at 987.647 kb on - strand, within Echvi_0865 at 987.650 kb on + strand, within Echvi_0865 at 987.650 kb on + strand, within Echvi_0865 at 987.651 kb on - strand, within Echvi_0865 at 987.651 kb on - strand, within Echvi_0865 at 987.751 kb on + strand at 987.771 kb on + strand at 987.784 kb on - strand at 987.797 kb on + strand at 987.798 kb on - strand at 988.066 kb on + strand at 988.111 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 985,924 + -1.0 985,932 + +0.5 985,974 + -0.1 985,981 + -0.1 985,981 + -3.4 986,093 - -1.0 986,217 - -3.0 986,217 - -1.0 986,285 + +2.6 986,334 + -0.2 986,367 + +1.6 986,367 + -0.8 986,444 + -0.1 986,445 - -2.4 986,445 - +0.0 986,487 - -0.2 986,487 - -1.5 986,487 - +0.8 986,492 - +0.7 986,500 + +0.0 986,546 + +0.8 986,546 + -0.6 986,546 + +0.1 986,549 + -0.9 986,551 + -0.0 986,551 + +0.6 986,551 + -0.9 986,551 + -0.5 986,551 + -0.7 986,553 + +0.2 986,553 + -2.4 986,583 - -0.4 986,603 + -0.4 986,603 + +0.3 986,604 - +0.2 986,604 - -0.4 986,624 - +0.4 986,624 - -1.5 986,624 - -0.9 986,624 - +0.3 986,630 + +0.4 986,630 + +0.2 986,630 + -1.4 986,631 - -1.8 986,634 + +0.8 986,635 - -0.2 986,696 - -1.0 986,704 + +1.3 986,704 + -1.7 986,755 + -0.6 986,755 + -0.3 986,755 + -1.2 986,755 + +0.6 986,763 + +0.6 986,764 - +0.0 986,814 + -0.2 986,814 + -0.9 986,815 - -0.2 986,819 - -1.4 986,819 - -1.4 986,819 - +0.1 986,830 + +0.0 986,831 - +0.6 986,898 - +0.7 986,904 + -0.2 986,997 + Echvi_0864 0.32 +1.0 987,035 + Echvi_0864 0.49 -2.5 987,036 - Echvi_0864 0.49 +1.5 987,111 - Echvi_0864 0.81 -0.2 987,112 + Echvi_0864 0.81 -1.0 987,112 + Echvi_0864 0.81 -1.0 987,112 + Echvi_0864 0.81 -0.1 987,112 + Echvi_0864 0.81 +0.8 987,112 + Echvi_0864 0.81 -0.0 987,112 + Echvi_0864 0.81 +1.0 987,113 - Echvi_0864 0.81 +0.5 987,113 - Echvi_0864 0.81 -0.1 987,113 - Echvi_0864 0.81 +0.6 987,113 - Echvi_0864 0.81 -0.4 987,113 - Echvi_0864 0.81 +1.2 987,113 - Echvi_0864 0.81 +0.9 987,113 - Echvi_0864 0.81 +1.3 987,113 - Echvi_0864 0.81 +3.2 987,113 - Echvi_0864 0.81 +0.2 987,113 - Echvi_0864 0.81 +1.2 987,113 - Echvi_0864 0.81 -0.2 987,113 - Echvi_0864 0.81 -1.5 987,116 + Echvi_0864 0.83 -3.8 987,116 + Echvi_0864 0.83 -0.7 987,116 + Echvi_0864 0.83 -0.4 987,116 + Echvi_0864 0.83 +0.0 987,116 + Echvi_0864 0.83 -0.5 987,116 + Echvi_0864 0.83 +0.1 987,117 - Echvi_0864 0.83 +1.3 987,117 - Echvi_0864 0.83 +0.8 987,117 - Echvi_0864 0.83 +1.0 987,117 - Echvi_0864 0.83 -0.5 987,117 - Echvi_0864 0.83 +0.6 987,117 - Echvi_0864 0.83 +0.0 987,117 - Echvi_0864 0.83 +1.0 987,117 - Echvi_0864 0.83 -0.2 987,121 + Echvi_0864 0.85 +1.1 987,121 + Echvi_0864 0.85 +0.3 987,121 + Echvi_0864 0.85 -1.8 987,122 - Echvi_0864 0.85 -0.4 987,122 - Echvi_0864 0.85 +1.0 987,156 + -0.7 987,156 + +0.2 987,157 - -1.0 987,168 - -0.0 987,168 - +0.6 987,236 + Echvi_0865 0.17 -0.8 987,236 + Echvi_0865 0.17 -1.7 987,237 - Echvi_0865 0.18 +0.5 987,237 - Echvi_0865 0.18 -0.4 987,237 - Echvi_0865 0.18 +0.9 987,237 - Echvi_0865 0.18 +1.2 987,237 - Echvi_0865 0.18 -0.7 987,237 - Echvi_0865 0.18 +0.6 987,277 + Echvi_0865 0.24 +0.4 987,277 + Echvi_0865 0.24 -0.2 987,277 + Echvi_0865 0.24 +1.6 987,279 + Echvi_0865 0.25 +1.2 987,279 + Echvi_0865 0.25 -0.3 987,279 + Echvi_0865 0.25 -0.3 987,279 + Echvi_0865 0.25 -0.3 987,280 - Echvi_0865 0.25 +1.7 987,280 - Echvi_0865 0.25 -2.0 987,280 - Echvi_0865 0.25 +0.8 987,280 - Echvi_0865 0.25 +0.3 987,328 + Echvi_0865 0.33 -0.1 987,339 - Echvi_0865 0.34 -0.0 987,403 + Echvi_0865 0.45 -1.2 987,403 + Echvi_0865 0.45 +0.5 987,404 - Echvi_0865 0.45 +0.8 987,433 + Echvi_0865 0.50 -1.1 987,465 + Echvi_0865 0.55 +0.9 987,471 - Echvi_0865 0.56 -0.7 987,471 - Echvi_0865 0.56 +0.5 987,527 - Echvi_0865 0.66 -0.4 987,527 - Echvi_0865 0.66 +0.3 987,528 + Echvi_0865 0.66 +1.0 987,554 - Echvi_0865 0.70 +0.8 987,566 + Echvi_0865 0.72 -0.4 987,567 - Echvi_0865 0.72 +0.8 987,605 + Echvi_0865 0.79 -0.1 987,606 - Echvi_0865 0.79 +0.2 987,608 + Echvi_0865 0.79 -1.5 987,608 + Echvi_0865 0.79 -0.3 987,608 + Echvi_0865 0.79 +0.0 987,608 + Echvi_0865 0.79 +0.0 987,609 - Echvi_0865 0.79 +0.0 987,613 + Echvi_0865 0.80 +0.1 987,613 + Echvi_0865 0.80 +2.6 987,613 + Echvi_0865 0.80 -0.2 987,613 + Echvi_0865 0.80 +1.6 987,614 - Echvi_0865 0.80 +3.1 987,614 - Echvi_0865 0.80 +1.6 987,614 - Echvi_0865 0.80 -0.2 987,616 - Echvi_0865 0.80 +0.7 987,616 - Echvi_0865 0.80 +0.3 987,640 + Echvi_0865 0.84 -0.7 987,640 + Echvi_0865 0.84 -0.8 987,640 + Echvi_0865 0.84 +0.0 987,641 - +1.0 987,642 + Echvi_0865 0.85 -0.6 987,642 + Echvi_0865 0.85 +1.2 987,643 - Echvi_0865 0.85 +0.0 987,646 + Echvi_0865 0.85 +1.0 987,646 + Echvi_0865 0.85 -0.9 987,646 + Echvi_0865 0.85 +1.1 987,647 - Echvi_0865 0.86 +0.8 987,647 - Echvi_0865 0.86 +1.1 987,647 - Echvi_0865 0.86 -0.7 987,650 + Echvi_0865 0.86 +0.9 987,650 + Echvi_0865 0.86 +0.1 987,651 - Echvi_0865 0.86 +0.6 987,651 - Echvi_0865 0.86 +0.4 987,751 + -0.9 987,771 + +0.5 987,784 - +1.4 987,797 + +1.6 987,798 - -0.6 988,066 + -0.1 988,111 - -0.4
Or see this region's nucleotide sequence