Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0811

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
928,668	+		Echvi_0810	0.47	-0.8
928,669	-		Echvi_0810	0.47	+0.6
928,677	+		Echvi_0810	0.47	-0.4
928,716	-		Echvi_0810	0.50	-0.5
928,788	+		Echvi_0810	0.54	-0.3
928,789	-		Echvi_0810	0.54	-1.7
928,801	-		Echvi_0810	0.55	-0.1
928,807	+		Echvi_0810	0.55	+0.3
928,808	-		Echvi_0810	0.55	-0.3
928,830	-		Echvi_0810	0.56	-1.4
928,857	+		Echvi_0810	0.58	-0.5
928,890	+		Echvi_0810	0.60	-1.6
928,890	+		Echvi_0810	0.60	+0.6
928,891	-		Echvi_0810	0.60	+0.8
928,895	+		Echvi_0810	0.60	+0.1
928,896	-		Echvi_0810	0.60	-0.6
928,979	+		Echvi_0810	0.65	+0.1
928,979	+		Echvi_0810	0.65	+0.1
928,982	+		Echvi_0810	0.65	-0.6
928,983	-		Echvi_0810	0.66	-0.9
928,983	-		Echvi_0810	0.66	+0.2
928,983	-		Echvi_0810	0.66	+0.3
928,989	-		Echvi_0810	0.66	-1.7
929,016	+		Echvi_0810	0.68	-0.2
929,080	-		Echvi_0810	0.71	+0.0
929,080	-		Echvi_0810	0.71	-3.3
929,084	+		Echvi_0810	0.72	-0.7
929,115	+		Echvi_0810	0.73	-0.8
929,168	-		Echvi_0810	0.77	-0.1
929,168	-		Echvi_0810	0.77	-0.7
929,169	+		Echvi_0810	0.77	+0.5
929,169	+		Echvi_0810	0.77	+1.1
929,196	-		Echvi_0810	0.78	-0.9
929,212	+		Echvi_0810	0.79	-0.1
929,212	+		Echvi_0810	0.79	+1.2
929,213	-		Echvi_0810	0.79	-0.8
929,216	-		Echvi_0810	0.79	+0.3
929,220	+		Echvi_0810	0.80	-0.2
929,221	-		Echvi_0810	0.80	+0.3
929,221	-		Echvi_0810	0.80	-1.3
929,221	-		Echvi_0810	0.80	-2.0
929,221	-		Echvi_0810	0.80	-0.5
929,222	+		Echvi_0810	0.80	+1.2
929,254	+		Echvi_0810	0.82	+1.8
929,254	+		Echvi_0810	0.82	-0.2
929,255	-		Echvi_0810	0.82	-2.2
929,255	-		Echvi_0810	0.82	-0.2
929,255	-		Echvi_0810	0.82	-0.7
929,256	+		Echvi_0810	0.82	-0.2
929,256	+		Echvi_0810	0.82	-0.2
929,257	-		Echvi_0810	0.82	-1.7
929,257	-		Echvi_0810	0.82	+0.7
929,257	-		Echvi_0810	0.82	-0.8
929,257	-		Echvi_0810	0.82	+0.3
929,259	+		Echvi_0810	0.82	-0.1
929,259	+		Echvi_0810	0.82	-0.1
929,260	-		Echvi_0810	0.82	-0.9
929,260	-		Echvi_0810	0.82	-1.9
929,260	-		Echvi_0810	0.82	+0.1
929,260	-		Echvi_0810	0.82	-1.1
929,405	-				+2.2
929,416	-				+1.2
929,427	+				-1.9
929,447	+				-0.2
929,662	+				-1.5
929,663	-				-0.6
929,665	+				+0.3
929,665	+				+0.2
929,696	+				-0.2
929,752	+				+0.3
929,752	+				+0.1
929,855	+				+0.7
929,855	+				+0.1
929,855	+				+4.5
929,855	+				+1.7
929,855	+				+1.0
929,856	-				-1.4
929,890	-		Echvi_0811	0.12	+0.7
929,895	-		Echvi_0811	0.12	+0.7
929,938	-		Echvi_0811	0.14	+0.2
929,945	+		Echvi_0811	0.14	+0.1
929,945	+		Echvi_0811	0.14	+0.5
929,946	-		Echvi_0811	0.14	+0.9
929,946	-		Echvi_0811	0.14	+1.3
930,044	+		Echvi_0811	0.20	+1.3
930,163	-		Echvi_0811	0.26	-0.0
930,196	-		Echvi_0811	0.27	-0.7
930,223	+		Echvi_0811	0.29	+1.2
930,223	+		Echvi_0811	0.29	-1.5
930,223	+		Echvi_0811	0.29	+1.1
930,224	-		Echvi_0811	0.29	-1.1
930,280	-		Echvi_0811	0.32	-0.8
930,509	+		Echvi_0811	0.43	-1.1
930,509	+		Echvi_0811	0.43	+0.8
930,586	+		Echvi_0811	0.47	+1.1
930,671	-		Echvi_0811	0.52	-0.2
930,671	-		Echvi_0811	0.52	-0.3
930,786	+		Echvi_0811	0.58	+1.1
930,807	+		Echvi_0811	0.59	+0.9
930,807	+		Echvi_0811	0.59	-1.4
930,807	+		Echvi_0811	0.59	+0.4
930,807	+		Echvi_0811	0.59	-0.7
930,808	-		Echvi_0811	0.59	-0.3
930,808	-		Echvi_0811	0.59	+1.7
930,997	-		Echvi_0811	0.69	-0.2
930,997	-		Echvi_0811	0.69	+0.1
931,058	+		Echvi_0811	0.72	+0.5
931,058	+		Echvi_0811	0.72	+0.2
931,059	-		Echvi_0811	0.72	-0.6
931,125	-		Echvi_0811	0.75	+0.3
931,151	-		Echvi_0811	0.77	+0.8
931,151	-		Echvi_0811	0.77	-0.8
931,179	+		Echvi_0811	0.78	+0.5
931,179	+		Echvi_0811	0.78	+1.3
931,214	+		Echvi_0811	0.80	-0.9
931,214	+		Echvi_0811	0.80	+1.7
931,215	-		Echvi_0811	0.80	-0.5
931,220	+		Echvi_0811	0.80	+0.5
931,257	+		Echvi_0811	0.82	+1.1
931,257	+		Echvi_0811	0.82	-0.2
931,257	+		Echvi_0811	0.82	-0.2
931,258	-		Echvi_0811	0.82	+0.5
931,258	-		Echvi_0811	0.82	-1.5
931,258	-		Echvi_0811	0.82	+1.0
931,258	-		Echvi_0811	0.82	-0.6
931,258	-		Echvi_0811	0.82	+0.2
931,258	-		Echvi_0811	0.82	-1.7
931,258	-		Echvi_0811	0.82	+0.3
931,258	-		Echvi_0811	0.82	-1.1
931,258	-		Echvi_0811	0.82	-0.3
931,259	+		Echvi_0811	0.82	+0.1
931,259	+		Echvi_0811	0.82	+0.0
931,259	+		Echvi_0811	0.82	+1.2
931,260	-		Echvi_0811	0.82	-0.1
931,313	+		Echvi_0811	0.85	-0.4
931,344	+		Echvi_0811	0.87	-0.8
931,404	-		Echvi_0811	0.90	-1.7
931,455	+				-0.8
931,455	+				-0.8
931,571	-				+0.4
931,643	+				-2.1
931,644	-				-0.0
931,644	-				+1.4
931,644	-				-0.8
931,644	-				-1.1
931,764	+				+1.3
931,765	-				-0.5
931,769	+				-1.4
931,883	+		Echvi_0812	0.26	-0.2
931,883	+		Echvi_0812	0.26	+0.8
931,883	+		Echvi_0812	0.26	-0.7
931,895	-		Echvi_0812	0.28	+0.2
931,895	-		Echvi_0812	0.28	-0.6
931,916	+		Echvi_0812	0.31	+0.0
931,916	+		Echvi_0812	0.31	+0.1
931,917	-		Echvi_0812	0.31	-0.2
931,917	-		Echvi_0812	0.31	+0.7
932,008	-		Echvi_0812	0.45	-0.6
932,036	+		Echvi_0812	0.50	+0.5
932,036	+		Echvi_0812	0.50	+1.2
932,037	-		Echvi_0812	0.50	-1.5
932,085	+		Echvi_0812	0.57	-1.2
932,135	+		Echvi_0812	0.65	-0.6
932,135	+		Echvi_0812	0.65	+1.7
932,135	+		Echvi_0812	0.65	-1.4
932,136	-		Echvi_0812	0.65	-0.6
932,136	-		Echvi_0812	0.65	-0.2
932,136	-		Echvi_0812	0.65	+1.7
932,136	-		Echvi_0812	0.65	-0.7
932,136	-		Echvi_0812	0.65	+0.6
932,173	+		Echvi_0812	0.71	-0.9
932,174	-		Echvi_0812	0.71	-0.1
932,344	+				-0.1
932,345	-				-1.5
932,345	-				-1.1
932,345	-				-0.7
932,364	-				+0.1
932,364	-				+1.0
932,371	+				-0.2
932,428	+				-0.9
932,478	+		Echvi_0813	0.23	-2.0
932,478	+		Echvi_0813	0.23	+0.6
932,484	-		Echvi_0813	0.26	+0.0