Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0785 and Echvi_0786 are separated by 317 nucleotides
Echvi_0785: Echvi_0785 - Fatty acid desaturase., at 888,719 to 889,720
_0785
Echvi_0786: Echvi_0786 - hypothetical protein, at 890,038 to 891,483
_0786
Position (kb) 888
889
890 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 887.853 kb on + strand at 887.854 kb on - strand at 887.926 kb on + strand at 887.926 kb on + strand at 887.926 kb on + strand at 887.926 kb on + strand at 887.927 kb on - strand at 887.927 kb on - strand at 887.928 kb on + strand at 887.928 kb on + strand at 887.928 kb on + strand at 887.928 kb on + strand at 887.928 kb on + strand at 887.929 kb on - strand at 887.929 kb on - strand at 887.963 kb on - strand at 887.981 kb on + strand at 887.981 kb on + strand at 887.981 kb on + strand at 887.982 kb on - strand at 887.983 kb on + strand at 887.983 kb on + strand at 887.983 kb on + strand at 887.983 kb on + strand at 887.983 kb on + strand at 887.983 kb on + strand at 887.983 kb on + strand at 887.984 kb on - strand at 887.984 kb on - strand at 887.984 kb on - strand at 887.984 kb on - strand at 887.993 kb on + strand at 887.993 kb on + strand at 887.993 kb on + strand at 887.994 kb on - strand at 887.994 kb on - strand at 888.036 kb on - strand at 888.112 kb on + strand at 888.154 kb on - strand at 888.178 kb on - strand at 888.201 kb on + strand at 888.220 kb on + strand at 888.221 kb on - strand at 888.221 kb on - strand at 888.237 kb on + strand at 888.258 kb on - strand at 888.289 kb on - strand at 888.363 kb on - strand at 888.363 kb on - strand at 888.363 kb on - strand at 888.366 kb on + strand at 888.370 kb on - strand at 888.370 kb on - strand at 888.370 kb on - strand at 888.413 kb on - strand at 888.417 kb on - strand at 888.477 kb on - strand at 888.484 kb on - strand at 888.484 kb on - strand at 888.484 kb on - strand at 888.490 kb on + strand at 888.490 kb on + strand at 888.491 kb on - strand at 888.520 kb on + strand at 888.520 kb on + strand at 888.579 kb on + strand at 888.579 kb on + strand at 888.580 kb on - strand at 888.580 kb on - strand at 888.580 kb on - strand at 888.580 kb on - strand at 888.583 kb on + strand at 888.595 kb on + strand at 888.595 kb on + strand at 888.711 kb on - strand at 888.711 kb on - strand at 888.780 kb on + strand at 888.780 kb on + strand at 888.780 kb on + strand at 888.805 kb on - strand at 888.860 kb on + strand, within Echvi_0785 at 888.904 kb on + strand, within Echvi_0785 at 888.906 kb on + strand, within Echvi_0785 at 888.906 kb on + strand, within Echvi_0785 at 888.907 kb on - strand, within Echvi_0785 at 888.907 kb on - strand, within Echvi_0785 at 888.907 kb on - strand, within Echvi_0785 at 888.907 kb on - strand, within Echvi_0785 at 888.907 kb on - strand, within Echvi_0785 at 888.952 kb on + strand, within Echvi_0785 at 888.959 kb on - strand, within Echvi_0785 at 889.075 kb on + strand, within Echvi_0785 at 889.075 kb on + strand, within Echvi_0785 at 889.075 kb on + strand, within Echvi_0785 at 889.078 kb on - strand, within Echvi_0785 at 889.139 kb on - strand, within Echvi_0785 at 889.181 kb on + strand, within Echvi_0785 at 889.181 kb on + strand, within Echvi_0785 at 889.182 kb on - strand, within Echvi_0785 at 889.182 kb on - strand, within Echvi_0785 at 889.210 kb on + strand, within Echvi_0785 at 889.210 kb on + strand, within Echvi_0785 at 889.211 kb on - strand, within Echvi_0785 at 889.211 kb on - strand, within Echvi_0785 at 889.211 kb on - strand, within Echvi_0785 at 889.212 kb on + strand, within Echvi_0785 at 889.212 kb on + strand, within Echvi_0785 at 889.212 kb on + strand, within Echvi_0785 at 889.213 kb on - strand, within Echvi_0785 at 889.213 kb on - strand, within Echvi_0785 at 889.216 kb on + strand, within Echvi_0785 at 889.217 kb on - strand, within Echvi_0785 at 889.217 kb on - strand, within Echvi_0785 at 889.263 kb on + strand, within Echvi_0785 at 889.264 kb on - strand, within Echvi_0785 at 889.264 kb on - strand, within Echvi_0785 at 889.320 kb on + strand, within Echvi_0785 at 889.320 kb on + strand, within Echvi_0785 at 889.320 kb on + strand, within Echvi_0785 at 889.320 kb on + strand, within Echvi_0785 at 889.320 kb on + strand, within Echvi_0785 at 889.320 kb on + strand, within Echvi_0785 at 889.320 kb on + strand, within Echvi_0785 at 889.320 kb on + strand, within Echvi_0785 at 889.321 kb on - strand, within Echvi_0785 at 889.338 kb on - strand, within Echvi_0785 at 889.441 kb on + strand, within Echvi_0785 at 889.446 kb on + strand, within Echvi_0785 at 889.446 kb on + strand, within Echvi_0785 at 889.447 kb on - strand, within Echvi_0785 at 889.456 kb on - strand, within Echvi_0785 at 889.498 kb on + strand, within Echvi_0785 at 889.499 kb on - strand, within Echvi_0785 at 889.499 kb on - strand, within Echvi_0785 at 889.499 kb on - strand, within Echvi_0785 at 889.499 kb on - strand, within Echvi_0785 at 889.501 kb on + strand, within Echvi_0785 at 889.501 kb on + strand, within Echvi_0785 at 889.502 kb on - strand, within Echvi_0785 at 889.502 kb on - strand, within Echvi_0785 at 889.577 kb on - strand, within Echvi_0785 at 889.654 kb on + strand at 889.670 kb on + strand at 889.671 kb on - strand at 889.695 kb on + strand at 889.724 kb on - strand at 889.724 kb on - strand at 889.727 kb on + strand at 889.727 kb on + strand at 889.728 kb on - strand at 889.729 kb on + strand at 889.730 kb on - strand at 889.777 kb on + strand at 889.809 kb on + strand at 889.809 kb on + strand at 889.810 kb on - strand at 889.814 kb on - strand at 889.822 kb on + strand at 889.874 kb on + strand at 889.878 kb on + strand at 889.878 kb on + strand at 889.879 kb on - strand at 889.879 kb on - strand at 889.879 kb on - strand at 889.955 kb on - strand at 889.963 kb on + strand at 890.011 kb on - strand at 890.029 kb on - strand at 890.030 kb on + strand at 890.030 kb on + strand at 890.030 kb on + strand at 890.030 kb on + strand at 890.039 kb on + strand at 890.044 kb on + strand at 890.068 kb on + strand at 890.068 kb on + strand at 890.103 kb on + strand at 890.104 kb on - strand at 890.105 kb on + strand at 890.109 kb on + strand at 890.110 kb on - strand at 890.110 kb on - strand at 890.141 kb on + strand at 890.141 kb on + strand at 890.176 kb on - strand at 890.181 kb on - strand at 890.196 kb on + strand, within Echvi_0786 at 890.235 kb on - strand, within Echvi_0786 at 890.235 kb on - strand, within Echvi_0786 at 890.241 kb on + strand, within Echvi_0786 at 890.246 kb on + strand, within Echvi_0786 at 890.306 kb on + strand, within Echvi_0786 at 890.306 kb on + strand, within Echvi_0786 at 890.306 kb on + strand, within Echvi_0786 at 890.306 kb on + strand, within Echvi_0786 at 890.306 kb on + strand, within Echvi_0786 at 890.306 kb on + strand, within Echvi_0786 at 890.306 kb on + strand, within Echvi_0786 at 890.306 kb on + strand, within Echvi_0786 at 890.306 kb on + strand, within Echvi_0786 at 890.307 kb on - strand, within Echvi_0786 at 890.307 kb on - strand, within Echvi_0786 at 890.307 kb on - strand, within Echvi_0786 at 890.307 kb on - strand, within Echvi_0786 at 890.307 kb on - strand, within Echvi_0786 at 890.307 kb on - strand, within Echvi_0786 at 890.307 kb on - strand, within Echvi_0786 at 890.307 kb on - strand, within Echvi_0786 at 890.307 kb on - strand, within Echvi_0786 at 890.331 kb on - strand, within Echvi_0786 at 890.331 kb on - strand, within Echvi_0786 at 890.369 kb on - strand, within Echvi_0786 at 890.495 kb on + strand, within Echvi_0786 at 890.495 kb on + strand, within Echvi_0786 at 890.506 kb on - strand, within Echvi_0786 at 890.561 kb on + strand, within Echvi_0786 at 890.594 kb on + strand, within Echvi_0786 at 890.594 kb on + strand, within Echvi_0786 at 890.594 kb on + strand, within Echvi_0786 at 890.594 kb on + strand, within Echvi_0786 at 890.594 kb on + strand, within Echvi_0786 at 890.594 kb on + strand, within Echvi_0786 at 890.594 kb on + strand, within Echvi_0786 at 890.595 kb on - strand, within Echvi_0786 at 890.616 kb on - strand, within Echvi_0786 at 890.616 kb on - strand, within Echvi_0786 at 890.618 kb on + strand, within Echvi_0786 at 890.618 kb on + strand, within Echvi_0786 at 890.618 kb on + strand, within Echvi_0786 at 890.618 kb on + strand, within Echvi_0786 at 890.618 kb on + strand, within Echvi_0786 at 890.618 kb on + strand, within Echvi_0786 at 890.618 kb on + strand, within Echvi_0786 at 890.618 kb on + strand, within Echvi_0786 at 890.618 kb on + strand, within Echvi_0786 at 890.619 kb on - strand, within Echvi_0786 at 890.619 kb on - strand, within Echvi_0786 at 890.653 kb on - strand, within Echvi_0786 at 890.664 kb on + strand, within Echvi_0786 at 890.681 kb on + strand, within Echvi_0786 at 890.682 kb on - strand, within Echvi_0786 at 890.682 kb on - strand, within Echvi_0786 at 890.682 kb on - strand, within Echvi_0786
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 887,853 + -3.6 887,854 - +2.1 887,926 + +0.8 887,926 + -2.7 887,926 + -0.7 887,926 + +0.1 887,927 - +0.2 887,927 - -0.7 887,928 + +0.7 887,928 + -0.6 887,928 + -0.5 887,928 + +1.5 887,928 + -0.3 887,929 - +0.7 887,929 - -0.1 887,963 - -0.3 887,981 + +1.0 887,981 + +0.3 887,981 + -0.3 887,982 - +0.5 887,983 + +1.4 887,983 + -0.1 887,983 + +0.3 887,983 + -0.1 887,983 + +0.2 887,983 + +0.4 887,983 + +0.6 887,984 - -0.1 887,984 - +1.3 887,984 - -1.3 887,984 - -0.2 887,993 + +0.7 887,993 + +0.4 887,993 + -0.1 887,994 - -0.3 887,994 - -0.2 888,036 - -2.2 888,112 + +0.6 888,154 - -0.3 888,178 - -0.1 888,201 + +0.9 888,220 + -1.8 888,221 - -1.1 888,221 - -1.2 888,237 + -1.2 888,258 - -0.3 888,289 - +1.7 888,363 - -0.6 888,363 - -0.7 888,363 - +0.0 888,366 + -0.2 888,370 - +1.0 888,370 - +1.1 888,370 - -0.5 888,413 - -0.3 888,417 - +2.7 888,477 - +0.7 888,484 - -0.5 888,484 - -2.5 888,484 - -1.3 888,490 + -0.5 888,490 + -0.7 888,491 - -0.5 888,520 + -0.0 888,520 + +0.7 888,579 + -1.1 888,579 + +1.7 888,580 - -0.0 888,580 - -0.9 888,580 - -1.1 888,580 - -0.2 888,583 + +0.5 888,595 + +0.8 888,595 + +1.5 888,711 - -0.4 888,711 - -0.0 888,780 + +1.7 888,780 + +1.5 888,780 + +1.3 888,805 - +1.1 888,860 + Echvi_0785 0.14 +2.0 888,904 + Echvi_0785 0.18 +1.9 888,906 + Echvi_0785 0.19 +2.6 888,906 + Echvi_0785 0.19 +1.5 888,907 - Echvi_0785 0.19 +2.1 888,907 - Echvi_0785 0.19 +2.7 888,907 - Echvi_0785 0.19 +3.2 888,907 - Echvi_0785 0.19 +0.1 888,907 - Echvi_0785 0.19 +1.7 888,952 + Echvi_0785 0.23 +2.0 888,959 - Echvi_0785 0.24 +1.9 889,075 + Echvi_0785 0.36 +3.4 889,075 + Echvi_0785 0.36 +3.7 889,075 + Echvi_0785 0.36 +1.5 889,078 - Echvi_0785 0.36 +2.0 889,139 - Echvi_0785 0.42 +2.6 889,181 + Echvi_0785 0.46 +3.1 889,181 + Echvi_0785 0.46 +0.2 889,182 - Echvi_0785 0.46 +2.0 889,182 - Echvi_0785 0.46 +1.6 889,210 + Echvi_0785 0.49 +1.3 889,210 + Echvi_0785 0.49 +1.5 889,211 - Echvi_0785 0.49 +1.7 889,211 - Echvi_0785 0.49 +1.0 889,211 - Echvi_0785 0.49 +0.3 889,212 + Echvi_0785 0.49 +2.0 889,212 + Echvi_0785 0.49 +0.9 889,212 + Echvi_0785 0.49 +0.9 889,213 - Echvi_0785 0.49 +2.0 889,213 - Echvi_0785 0.49 +1.9 889,216 + Echvi_0785 0.50 +1.7 889,217 - Echvi_0785 0.50 +1.7 889,217 - Echvi_0785 0.50 +3.1 889,263 + Echvi_0785 0.54 +1.2 889,264 - Echvi_0785 0.54 +1.9 889,264 - Echvi_0785 0.54 +1.9 889,320 + Echvi_0785 0.60 -0.5 889,320 + Echvi_0785 0.60 +1.9 889,320 + Echvi_0785 0.60 +1.7 889,320 + Echvi_0785 0.60 +1.7 889,320 + Echvi_0785 0.60 +1.7 889,320 + Echvi_0785 0.60 +2.5 889,320 + Echvi_0785 0.60 +2.4 889,320 + Echvi_0785 0.60 +1.2 889,321 - Echvi_0785 0.60 +1.3 889,338 - Echvi_0785 0.62 +0.7 889,441 + Echvi_0785 0.72 +2.6 889,446 + Echvi_0785 0.73 +2.0 889,446 + Echvi_0785 0.73 +1.3 889,447 - Echvi_0785 0.73 +0.4 889,456 - Echvi_0785 0.74 +1.2 889,498 + Echvi_0785 0.78 +1.4 889,499 - Echvi_0785 0.78 +2.7 889,499 - Echvi_0785 0.78 +1.7 889,499 - Echvi_0785 0.78 +1.5 889,499 - Echvi_0785 0.78 +2.1 889,501 + Echvi_0785 0.78 +4.2 889,501 + Echvi_0785 0.78 +1.1 889,502 - Echvi_0785 0.78 +3.3 889,502 - Echvi_0785 0.78 +2.6 889,577 - Echvi_0785 0.86 +2.7 889,654 + +2.5 889,670 + +2.1 889,671 - +2.0 889,695 + +2.0 889,724 - +1.3 889,724 - -1.1 889,727 + +3.1 889,727 + +1.1 889,728 - +1.1 889,729 + +1.5 889,730 - +1.4 889,777 + +2.1 889,809 + +1.5 889,809 + -0.7 889,810 - +0.0 889,814 - -0.9 889,822 + +1.6 889,874 + +0.7 889,878 + +2.3 889,878 + +1.9 889,879 - -0.3 889,879 - +0.4 889,879 - -0.4 889,955 - -0.6 889,963 + -0.0 890,011 - +0.5 890,029 - +3.0 890,030 + -0.4 890,030 + -0.3 890,030 + +1.2 890,030 + -1.5 890,039 + +0.4 890,044 + +0.4 890,068 + -0.3 890,068 + -1.2 890,103 + +0.9 890,104 - -0.7 890,105 + -1.7 890,109 + +1.7 890,110 - +0.1 890,110 - +0.1 890,141 + -0.1 890,141 + -0.9 890,176 - +1.9 890,181 - +0.7 890,196 + Echvi_0786 0.11 +0.3 890,235 - Echvi_0786 0.14 +1.1 890,235 - Echvi_0786 0.14 +0.4 890,241 + Echvi_0786 0.14 -0.5 890,246 + Echvi_0786 0.14 -1.6 890,306 + Echvi_0786 0.19 +0.5 890,306 + Echvi_0786 0.19 -0.1 890,306 + Echvi_0786 0.19 -1.7 890,306 + Echvi_0786 0.19 -2.5 890,306 + Echvi_0786 0.19 -0.1 890,306 + Echvi_0786 0.19 +0.3 890,306 + Echvi_0786 0.19 -1.7 890,306 + Echvi_0786 0.19 -0.1 890,306 + Echvi_0786 0.19 +0.1 890,307 - Echvi_0786 0.19 -0.3 890,307 - Echvi_0786 0.19 -0.7 890,307 - Echvi_0786 0.19 -0.7 890,307 - Echvi_0786 0.19 -1.5 890,307 - Echvi_0786 0.19 -0.7 890,307 - Echvi_0786 0.19 -0.1 890,307 - Echvi_0786 0.19 +0.9 890,307 - Echvi_0786 0.19 +0.9 890,307 - Echvi_0786 0.19 +0.2 890,331 - Echvi_0786 0.20 -0.2 890,331 - Echvi_0786 0.20 -0.5 890,369 - Echvi_0786 0.23 +0.7 890,495 + Echvi_0786 0.32 +0.2 890,495 + Echvi_0786 0.32 -0.2 890,506 - Echvi_0786 0.32 +0.4 890,561 + Echvi_0786 0.36 +0.4 890,594 + Echvi_0786 0.38 -1.0 890,594 + Echvi_0786 0.38 -1.1 890,594 + Echvi_0786 0.38 -0.5 890,594 + Echvi_0786 0.38 +1.2 890,594 + Echvi_0786 0.38 -1.9 890,594 + Echvi_0786 0.38 -0.7 890,594 + Echvi_0786 0.38 +1.2 890,595 - Echvi_0786 0.39 +0.4 890,616 - Echvi_0786 0.40 +0.6 890,616 - Echvi_0786 0.40 +1.7 890,618 + Echvi_0786 0.40 +0.1 890,618 + Echvi_0786 0.40 -1.7 890,618 + Echvi_0786 0.40 -0.7 890,618 + Echvi_0786 0.40 +0.1 890,618 + Echvi_0786 0.40 +0.7 890,618 + Echvi_0786 0.40 -1.2 890,618 + Echvi_0786 0.40 -0.9 890,618 + Echvi_0786 0.40 +0.5 890,618 + Echvi_0786 0.40 +0.3 890,619 - Echvi_0786 0.40 +0.6 890,619 - Echvi_0786 0.40 -1.0 890,653 - Echvi_0786 0.43 -0.3 890,664 + Echvi_0786 0.43 +0.2 890,681 + Echvi_0786 0.44 -0.7 890,682 - Echvi_0786 0.45 +0.4 890,682 - Echvi_0786 0.45 -0.1 890,682 - Echvi_0786 0.45 +0.3
Or see this region's nucleotide sequence