Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0783 and Echvi_0784 are separated by 173 nucleotides
Echvi_0783: Echvi_0783 - hypothetical protein, at 883,814 to 885,331
_0783
Echvi_0784: Echvi_0784 - ATP-dependent DNA helicase RecQ, at 885,505 to 887,631
_0784
Position (kb) 885
886
887
888 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 884.558 kb on - strand, within Echvi_0783 at 884.558 kb on - strand, within Echvi_0783 at 884.567 kb on + strand, within Echvi_0783 at 884.567 kb on + strand, within Echvi_0783 at 884.568 kb on - strand, within Echvi_0783 at 884.568 kb on - strand, within Echvi_0783 at 884.568 kb on - strand, within Echvi_0783 at 884.568 kb on - strand, within Echvi_0783 at 884.570 kb on + strand, within Echvi_0783 at 884.576 kb on - strand, within Echvi_0783 at 884.623 kb on + strand, within Echvi_0783 at 884.624 kb on - strand, within Echvi_0783 at 884.675 kb on + strand, within Echvi_0783 at 884.675 kb on + strand, within Echvi_0783 at 884.675 kb on + strand, within Echvi_0783 at 884.675 kb on + strand, within Echvi_0783 at 884.675 kb on + strand, within Echvi_0783 at 884.676 kb on - strand, within Echvi_0783 at 884.676 kb on - strand, within Echvi_0783 at 884.677 kb on + strand, within Echvi_0783 at 884.677 kb on + strand, within Echvi_0783 at 884.684 kb on + strand, within Echvi_0783 at 884.685 kb on - strand, within Echvi_0783 at 884.707 kb on + strand, within Echvi_0783 at 884.807 kb on + strand, within Echvi_0783 at 884.807 kb on + strand, within Echvi_0783 at 884.807 kb on + strand, within Echvi_0783 at 884.965 kb on - strand, within Echvi_0783 at 884.965 kb on - strand, within Echvi_0783 at 884.988 kb on + strand, within Echvi_0783 at 884.988 kb on + strand, within Echvi_0783 at 884.989 kb on - strand, within Echvi_0783 at 884.990 kb on + strand, within Echvi_0783 at 884.990 kb on + strand, within Echvi_0783 at 884.994 kb on - strand, within Echvi_0783 at 885.058 kb on - strand, within Echvi_0783 at 885.174 kb on - strand, within Echvi_0783 at 885.185 kb on - strand at 885.185 kb on - strand at 885.207 kb on + strand at 885.207 kb on + strand at 885.207 kb on + strand at 885.237 kb on + strand at 885.241 kb on + strand at 885.241 kb on + strand at 885.241 kb on + strand at 885.242 kb on - strand at 885.242 kb on - strand at 885.242 kb on - strand at 885.242 kb on - strand at 885.242 kb on - strand at 885.242 kb on - strand at 885.242 kb on - strand at 885.242 kb on - strand at 885.247 kb on - strand at 885.350 kb on + strand at 885.351 kb on - strand at 885.392 kb on + strand at 885.471 kb on - strand at 885.471 kb on - strand at 885.477 kb on - strand at 885.525 kb on - strand at 885.529 kb on - strand at 885.529 kb on - strand at 885.539 kb on - strand at 885.545 kb on - strand at 885.549 kb on + strand at 885.550 kb on - strand at 885.590 kb on + strand at 885.641 kb on + strand at 885.687 kb on + strand at 885.687 kb on + strand at 885.757 kb on + strand, within Echvi_0784 at 885.835 kb on + strand, within Echvi_0784 at 885.835 kb on + strand, within Echvi_0784 at 885.836 kb on - strand, within Echvi_0784 at 885.917 kb on + strand, within Echvi_0784 at 885.917 kb on + strand, within Echvi_0784 at 885.917 kb on + strand, within Echvi_0784 at 885.918 kb on - strand, within Echvi_0784 at 885.968 kb on - strand, within Echvi_0784 at 885.968 kb on - strand, within Echvi_0784 at 885.968 kb on - strand, within Echvi_0784 at 886.007 kb on + strand, within Echvi_0784 at 886.007 kb on + strand, within Echvi_0784 at 886.017 kb on - strand, within Echvi_0784 at 886.123 kb on - strand, within Echvi_0784 at 886.123 kb on - strand, within Echvi_0784 at 886.123 kb on - strand, within Echvi_0784 at 886.126 kb on + strand, within Echvi_0784 at 886.126 kb on + strand, within Echvi_0784 at 886.181 kb on - strand, within Echvi_0784 at 886.230 kb on - strand, within Echvi_0784 at 886.441 kb on + strand, within Echvi_0784 at 886.441 kb on + strand, within Echvi_0784 at 886.441 kb on + strand, within Echvi_0784 at 886.444 kb on + strand, within Echvi_0784 at 886.444 kb on + strand, within Echvi_0784 at 886.501 kb on + strand, within Echvi_0784 at 886.501 kb on + strand, within Echvi_0784 at 886.501 kb on + strand, within Echvi_0784 at 886.502 kb on - strand, within Echvi_0784 at 886.502 kb on - strand, within Echvi_0784 at 886.504 kb on - strand, within Echvi_0784 at 886.504 kb on - strand, within Echvi_0784 at 886.504 kb on - strand, within Echvi_0784 at 886.504 kb on - strand, within Echvi_0784 at 886.507 kb on + strand, within Echvi_0784 at 886.507 kb on + strand, within Echvi_0784 at 886.507 kb on + strand, within Echvi_0784 at 886.508 kb on - strand, within Echvi_0784 at 886.508 kb on - strand, within Echvi_0784 at 886.508 kb on - strand, within Echvi_0784 at 886.646 kb on - strand, within Echvi_0784 at 886.824 kb on - strand, within Echvi_0784 at 886.824 kb on - strand, within Echvi_0784 at 887.047 kb on - strand, within Echvi_0784 at 887.082 kb on + strand, within Echvi_0784 at 887.128 kb on + strand, within Echvi_0784 at 887.128 kb on + strand, within Echvi_0784 at 887.135 kb on + strand, within Echvi_0784 at 887.148 kb on + strand, within Echvi_0784 at 887.148 kb on + strand, within Echvi_0784 at 887.148 kb on + strand, within Echvi_0784 at 887.148 kb on + strand, within Echvi_0784 at 887.148 kb on + strand, within Echvi_0784 at 887.148 kb on + strand, within Echvi_0784 at 887.148 kb on + strand, within Echvi_0784 at 887.149 kb on - strand, within Echvi_0784 at 887.149 kb on - strand, within Echvi_0784 at 887.149 kb on - strand, within Echvi_0784 at 887.149 kb on - strand, within Echvi_0784 at 887.149 kb on - strand, within Echvi_0784 at 887.149 kb on - strand, within Echvi_0784 at 887.149 kb on - strand, within Echvi_0784 at 887.149 kb on - strand, within Echvi_0784 at 887.149 kb on - strand, within Echvi_0784 at 887.149 kb on - strand, within Echvi_0784 at 887.171 kb on - strand, within Echvi_0784 at 887.174 kb on + strand, within Echvi_0784 at 887.237 kb on - strand, within Echvi_0784 at 887.449 kb on - strand at 887.449 kb on - strand at 887.629 kb on + strand at 887.629 kb on + strand at 887.640 kb on + strand at 887.666 kb on - strand at 887.717 kb on + strand at 887.717 kb on + strand at 887.718 kb on - strand at 887.853 kb on + strand at 887.854 kb on - strand at 887.926 kb on + strand at 887.926 kb on + strand at 887.926 kb on + strand at 887.926 kb on + strand at 887.927 kb on - strand at 887.927 kb on - strand at 887.928 kb on + strand at 887.928 kb on + strand at 887.928 kb on + strand at 887.928 kb on + strand at 887.928 kb on + strand at 887.929 kb on - strand at 887.929 kb on - strand at 887.963 kb on - strand at 887.981 kb on + strand at 887.981 kb on + strand at 887.981 kb on + strand at 887.982 kb on - strand at 887.983 kb on + strand at 887.983 kb on + strand at 887.983 kb on + strand at 887.983 kb on + strand at 887.983 kb on + strand at 887.983 kb on + strand at 887.983 kb on + strand at 887.984 kb on - strand at 887.984 kb on - strand at 887.984 kb on - strand at 887.984 kb on - strand at 887.993 kb on + strand at 887.993 kb on + strand at 887.993 kb on + strand at 887.994 kb on - strand at 887.994 kb on - strand at 888.036 kb on - strand at 888.112 kb on + strand at 888.154 kb on - strand at 888.178 kb on - strand at 888.201 kb on + strand at 888.220 kb on + strand at 888.221 kb on - strand at 888.221 kb on - strand at 888.237 kb on + strand at 888.258 kb on - strand at 888.289 kb on - strand at 888.363 kb on - strand at 888.363 kb on - strand at 888.363 kb on - strand at 888.366 kb on + strand at 888.370 kb on - strand at 888.370 kb on - strand at 888.370 kb on - strand at 888.413 kb on - strand at 888.417 kb on - strand at 888.477 kb on - strand at 888.484 kb on - strand at 888.484 kb on - strand at 888.484 kb on - strand at 888.490 kb on + strand at 888.490 kb on + strand at 888.491 kb on - strand at 888.520 kb on + strand at 888.520 kb on + strand at 888.579 kb on + strand at 888.579 kb on + strand at 888.580 kb on - strand at 888.580 kb on - strand at 888.580 kb on - strand at 888.580 kb on - strand at 888.583 kb on + strand at 888.595 kb on + strand at 888.595 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 884,558 - Echvi_0783 0.49 -2.5 884,558 - Echvi_0783 0.49 -0.6 884,567 + Echvi_0783 0.50 -0.6 884,567 + Echvi_0783 0.50 -0.5 884,568 - Echvi_0783 0.50 -0.9 884,568 - Echvi_0783 0.50 -2.2 884,568 - Echvi_0783 0.50 -0.8 884,568 - Echvi_0783 0.50 -0.3 884,570 + Echvi_0783 0.50 -0.7 884,576 - Echvi_0783 0.50 -0.2 884,623 + Echvi_0783 0.53 +0.4 884,624 - Echvi_0783 0.53 -0.4 884,675 + Echvi_0783 0.57 -1.1 884,675 + Echvi_0783 0.57 +0.3 884,675 + Echvi_0783 0.57 +0.3 884,675 + Echvi_0783 0.57 -0.2 884,675 + Echvi_0783 0.57 +0.0 884,676 - Echvi_0783 0.57 +0.1 884,676 - Echvi_0783 0.57 +0.1 884,677 + Echvi_0783 0.57 -0.6 884,677 + Echvi_0783 0.57 +0.1 884,684 + Echvi_0783 0.57 -0.2 884,685 - Echvi_0783 0.57 +0.1 884,707 + Echvi_0783 0.59 -0.1 884,807 + Echvi_0783 0.65 -0.4 884,807 + Echvi_0783 0.65 +0.3 884,807 + Echvi_0783 0.65 -1.4 884,965 - Echvi_0783 0.76 +0.1 884,965 - Echvi_0783 0.76 +0.5 884,988 + Echvi_0783 0.77 +0.8 884,988 + Echvi_0783 0.77 -0.7 884,989 - Echvi_0783 0.77 -0.9 884,990 + Echvi_0783 0.77 -0.3 884,990 + Echvi_0783 0.77 -2.3 884,994 - Echvi_0783 0.78 +1.1 885,058 - Echvi_0783 0.82 -0.3 885,174 - Echvi_0783 0.90 -0.9 885,185 - -1.5 885,185 - -0.7 885,207 + -0.7 885,207 + -2.8 885,207 + -2.1 885,237 + +2.0 885,241 + -2.9 885,241 + -1.3 885,241 + +0.7 885,242 - +0.2 885,242 - -0.7 885,242 - +0.7 885,242 - +0.2 885,242 - +0.4 885,242 - +1.3 885,242 - -2.5 885,242 - -0.1 885,247 - -3.2 885,350 + -2.3 885,351 - -0.2 885,392 + -0.8 885,471 - -0.2 885,471 - +0.2 885,477 - -0.1 885,525 - +1.2 885,529 - -2.2 885,529 - -0.3 885,539 - +1.7 885,545 - +0.3 885,549 + +1.1 885,550 - -0.7 885,590 + -0.1 885,641 + -0.1 885,687 + +0.7 885,687 + -0.0 885,757 + Echvi_0784 0.12 +0.7 885,835 + Echvi_0784 0.16 -0.7 885,835 + Echvi_0784 0.16 +1.5 885,836 - Echvi_0784 0.16 +1.2 885,917 + Echvi_0784 0.19 +0.1 885,917 + Echvi_0784 0.19 +1.2 885,917 + Echvi_0784 0.19 +1.4 885,918 - Echvi_0784 0.19 -1.0 885,968 - Echvi_0784 0.22 -0.5 885,968 - Echvi_0784 0.22 -0.2 885,968 - Echvi_0784 0.22 -0.1 886,007 + Echvi_0784 0.24 +1.2 886,007 + Echvi_0784 0.24 +1.1 886,017 - Echvi_0784 0.24 -0.2 886,123 - Echvi_0784 0.29 +0.7 886,123 - Echvi_0784 0.29 -0.2 886,123 - Echvi_0784 0.29 -1.0 886,126 + Echvi_0784 0.29 -0.7 886,126 + Echvi_0784 0.29 -0.7 886,181 - Echvi_0784 0.32 -0.6 886,230 - Echvi_0784 0.34 +1.8 886,441 + Echvi_0784 0.44 -1.4 886,441 + Echvi_0784 0.44 +1.7 886,441 + Echvi_0784 0.44 -0.9 886,444 + Echvi_0784 0.44 -1.3 886,444 + Echvi_0784 0.44 -0.8 886,501 + Echvi_0784 0.47 -0.8 886,501 + Echvi_0784 0.47 -0.8 886,501 + Echvi_0784 0.47 +0.2 886,502 - Echvi_0784 0.47 -0.6 886,502 - Echvi_0784 0.47 +1.1 886,504 - Echvi_0784 0.47 -0.3 886,504 - Echvi_0784 0.47 -3.6 886,504 - Echvi_0784 0.47 +1.0 886,504 - Echvi_0784 0.47 -0.5 886,507 + Echvi_0784 0.47 -0.5 886,507 + Echvi_0784 0.47 +0.8 886,507 + Echvi_0784 0.47 -0.6 886,508 - Echvi_0784 0.47 +0.5 886,508 - Echvi_0784 0.47 -0.2 886,508 - Echvi_0784 0.47 +0.2 886,646 - Echvi_0784 0.54 -2.4 886,824 - Echvi_0784 0.62 +0.2 886,824 - Echvi_0784 0.62 -0.9 887,047 - Echvi_0784 0.72 +0.9 887,082 + Echvi_0784 0.74 -1.0 887,128 + Echvi_0784 0.76 -1.7 887,128 + Echvi_0784 0.76 -0.4 887,135 + Echvi_0784 0.77 +1.2 887,148 + Echvi_0784 0.77 -0.9 887,148 + Echvi_0784 0.77 -0.3 887,148 + Echvi_0784 0.77 +0.7 887,148 + Echvi_0784 0.77 +0.1 887,148 + Echvi_0784 0.77 -0.2 887,148 + Echvi_0784 0.77 -2.6 887,148 + Echvi_0784 0.77 -2.0 887,149 - Echvi_0784 0.77 -0.2 887,149 - Echvi_0784 0.77 -0.8 887,149 - Echvi_0784 0.77 -0.3 887,149 - Echvi_0784 0.77 +0.7 887,149 - Echvi_0784 0.77 +0.3 887,149 - Echvi_0784 0.77 +0.0 887,149 - Echvi_0784 0.77 +0.0 887,149 - Echvi_0784 0.77 +0.1 887,149 - Echvi_0784 0.77 -0.1 887,149 - Echvi_0784 0.77 +0.2 887,171 - Echvi_0784 0.78 +0.7 887,174 + Echvi_0784 0.78 -1.9 887,237 - Echvi_0784 0.81 -0.4 887,449 - -0.6 887,449 - -0.6 887,629 + -0.3 887,629 + -0.6 887,640 + +0.5 887,666 - -1.4 887,717 + -0.7 887,717 + +1.3 887,718 - -0.9 887,853 + -3.6 887,854 - +2.1 887,926 + +0.8 887,926 + -2.7 887,926 + -0.7 887,926 + +0.1 887,927 - +0.2 887,927 - -0.7 887,928 + +0.7 887,928 + -0.6 887,928 + -0.5 887,928 + +1.5 887,928 + -0.3 887,929 - +0.7 887,929 - -0.1 887,963 - -0.3 887,981 + +1.0 887,981 + +0.3 887,981 + -0.3 887,982 - +0.5 887,983 + +1.4 887,983 + -0.1 887,983 + +0.3 887,983 + -0.1 887,983 + +0.2 887,983 + +0.4 887,983 + +0.6 887,984 - -0.1 887,984 - +1.3 887,984 - -1.3 887,984 - -0.2 887,993 + +0.7 887,993 + +0.4 887,993 + -0.1 887,994 - -0.3 887,994 - -0.2 888,036 - -2.2 888,112 + +0.6 888,154 - -0.3 888,178 - -0.1 888,201 + +0.9 888,220 + -1.8 888,221 - -1.1 888,221 - -1.2 888,237 + -1.2 888,258 - -0.3 888,289 - +1.7 888,363 - -0.6 888,363 - -0.7 888,363 - +0.0 888,366 + -0.2 888,370 - +1.0 888,370 - +1.1 888,370 - -0.5 888,413 - -0.3 888,417 - +2.7 888,477 - +0.7 888,484 - -0.5 888,484 - -2.5 888,484 - -1.3 888,490 + -0.5 888,490 + -0.7 888,491 - -0.5 888,520 + -0.0 888,520 + +0.7 888,579 + -1.1 888,579 + +1.7 888,580 - -0.0 888,580 - -0.9 888,580 - -1.1 888,580 - -0.2 888,583 + +0.5 888,595 + +0.8 888,595 + +1.5
Or see this region's nucleotide sequence