Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0780 and Echvi_0781 are separated by 3 nucleotides Echvi_0781 and Echvi_0782 are separated by 2 nucleotides
Echvi_0780: Echvi_0780 - DNA mismatch repair protein MutL, at 879,937 to 881,808
_0780
Echvi_0781: Echvi_0781 - Uncharacterized membrane protein (homolog of Drosophila rhomboid), at 881,812 to 882,603
_0781
Echvi_0782: Echvi_0782 - Uncharacterized membrane protein (homolog of Drosophila rhomboid), at 882,606 to 883,526
_0782
Position (kb)
881
882
883 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 881.809 kb on + strand at 881.811 kb on + strand at 881.811 kb on + strand at 881.817 kb on + strand at 881.817 kb on + strand at 881.817 kb on + strand at 881.818 kb on - strand at 881.846 kb on + strand at 881.846 kb on + strand at 881.869 kb on + strand at 881.869 kb on + strand at 881.869 kb on + strand at 881.870 kb on - strand at 881.870 kb on - strand at 881.874 kb on - strand at 881.920 kb on + strand, within Echvi_0781 at 881.923 kb on + strand, within Echvi_0781 at 881.923 kb on + strand, within Echvi_0781 at 881.925 kb on + strand, within Echvi_0781 at 881.974 kb on - strand, within Echvi_0781 at 882.006 kb on + strand, within Echvi_0781 at 882.007 kb on - strand, within Echvi_0781 at 882.017 kb on + strand, within Echvi_0781 at 882.017 kb on + strand, within Echvi_0781 at 882.022 kb on - strand, within Echvi_0781 at 882.022 kb on - strand, within Echvi_0781 at 882.069 kb on + strand, within Echvi_0781 at 882.109 kb on + strand, within Echvi_0781 at 882.110 kb on - strand, within Echvi_0781 at 882.121 kb on - strand, within Echvi_0781 at 882.217 kb on + strand, within Echvi_0781 at 882.217 kb on + strand, within Echvi_0781 at 882.217 kb on + strand, within Echvi_0781 at 882.217 kb on + strand, within Echvi_0781 at 882.217 kb on + strand, within Echvi_0781 at 882.217 kb on + strand, within Echvi_0781 at 882.217 kb on + strand, within Echvi_0781 at 882.218 kb on - strand, within Echvi_0781 at 882.218 kb on - strand, within Echvi_0781 at 882.218 kb on - strand, within Echvi_0781 at 882.218 kb on - strand, within Echvi_0781 at 882.219 kb on + strand, within Echvi_0781 at 882.219 kb on + strand, within Echvi_0781 at 882.219 kb on + strand, within Echvi_0781 at 882.219 kb on + strand, within Echvi_0781 at 882.219 kb on + strand, within Echvi_0781 at 882.219 kb on + strand, within Echvi_0781 at 882.232 kb on - strand, within Echvi_0781 at 882.239 kb on - strand, within Echvi_0781 at 882.283 kb on + strand, within Echvi_0781 at 882.284 kb on - strand, within Echvi_0781 at 882.284 kb on - strand, within Echvi_0781 at 882.284 kb on - strand, within Echvi_0781 at 882.337 kb on - strand, within Echvi_0781 at 882.347 kb on + strand, within Echvi_0781 at 882.348 kb on - strand, within Echvi_0781 at 882.452 kb on - strand, within Echvi_0781 at 882.476 kb on - strand, within Echvi_0781 at 882.482 kb on + strand, within Echvi_0781 at 882.483 kb on - strand, within Echvi_0781 at 882.483 kb on - strand, within Echvi_0781 at 882.485 kb on - strand, within Echvi_0781 at 882.485 kb on - strand, within Echvi_0781 at 882.485 kb on - strand, within Echvi_0781 at 882.486 kb on + strand, within Echvi_0781 at 882.487 kb on - strand, within Echvi_0781 at 882.487 kb on - strand, within Echvi_0781 at 882.487 kb on - strand, within Echvi_0781 at 882.487 kb on - strand, within Echvi_0781 at 882.489 kb on + strand, within Echvi_0781 at 882.489 kb on + strand, within Echvi_0781 at 882.490 kb on - strand, within Echvi_0781 at 882.490 kb on - strand, within Echvi_0781 at 882.492 kb on + strand, within Echvi_0781 at 882.492 kb on + strand, within Echvi_0781 at 882.493 kb on - strand, within Echvi_0781 at 882.538 kb on - strand at 882.545 kb on + strand at 882.550 kb on - strand at 882.609 kb on + strand at 882.610 kb on - strand at 882.627 kb on + strand at 882.627 kb on + strand at 882.667 kb on - strand at 882.717 kb on - strand, within Echvi_0782 at 882.776 kb on + strand, within Echvi_0782 at 882.827 kb on + strand, within Echvi_0782 at 882.827 kb on + strand, within Echvi_0782 at 882.827 kb on + strand, within Echvi_0782 at 882.827 kb on + strand, within Echvi_0782 at 882.831 kb on + strand, within Echvi_0782 at 882.831 kb on + strand, within Echvi_0782 at 882.831 kb on + strand, within Echvi_0782 at 882.831 kb on + strand, within Echvi_0782 at 882.831 kb on + strand at 882.831 kb on + strand, within Echvi_0782 at 882.831 kb on + strand, within Echvi_0782 at 882.831 kb on + strand, within Echvi_0782 at 882.832 kb on - strand, within Echvi_0782 at 882.832 kb on - strand, within Echvi_0782 at 882.832 kb on - strand, within Echvi_0782 at 882.832 kb on - strand, within Echvi_0782 at 882.839 kb on + strand, within Echvi_0782 at 882.884 kb on - strand, within Echvi_0782 at 882.884 kb on - strand, within Echvi_0782 at 882.885 kb on + strand, within Echvi_0782 at 882.886 kb on - strand, within Echvi_0782 at 882.913 kb on - strand, within Echvi_0782 at 882.942 kb on + strand, within Echvi_0782 at 882.942 kb on + strand, within Echvi_0782 at 882.942 kb on + strand, within Echvi_0782 at 882.943 kb on - strand, within Echvi_0782 at 882.976 kb on - strand, within Echvi_0782 at 882.976 kb on - strand, within Echvi_0782 at 882.987 kb on + strand, within Echvi_0782 at 882.988 kb on - strand, within Echvi_0782 at 882.988 kb on - strand, within Echvi_0782 at 882.995 kb on - strand, within Echvi_0782 at 883.009 kb on + strand, within Echvi_0782 at 883.009 kb on + strand, within Echvi_0782 at 883.009 kb on + strand, within Echvi_0782 at 883.010 kb on - strand, within Echvi_0782 at 883.056 kb on + strand, within Echvi_0782 at 883.146 kb on - strand, within Echvi_0782 at 883.147 kb on + strand, within Echvi_0782 at 883.148 kb on - strand, within Echvi_0782 at 883.153 kb on - strand, within Echvi_0782 at 883.228 kb on + strand, within Echvi_0782 at 883.233 kb on + strand, within Echvi_0782 at 883.237 kb on + strand, within Echvi_0782 at 883.237 kb on + strand, within Echvi_0782 at 883.237 kb on + strand, within Echvi_0782 at 883.237 kb on + strand, within Echvi_0782 at 883.237 kb on + strand, within Echvi_0782 at 883.237 kb on + strand, within Echvi_0782 at 883.237 kb on + strand, within Echvi_0782 at 883.238 kb on - strand, within Echvi_0782 at 883.238 kb on - strand, within Echvi_0782 at 883.238 kb on - strand, within Echvi_0782 at 883.238 kb on - strand, within Echvi_0782 at 883.238 kb on - strand, within Echvi_0782 at 883.238 kb on - strand, within Echvi_0782 at 883.239 kb on + strand, within Echvi_0782 at 883.239 kb on + strand, within Echvi_0782 at 883.239 kb on + strand, within Echvi_0782 at 883.239 kb on + strand, within Echvi_0782 at 883.239 kb on + strand, within Echvi_0782 at 883.240 kb on - strand, within Echvi_0782 at 883.240 kb on - strand, within Echvi_0782 at 883.365 kb on + strand, within Echvi_0782 at 883.366 kb on - strand, within Echvi_0782 at 883.366 kb on - strand, within Echvi_0782 at 883.520 kb on + strand at 883.521 kb on - strand at 883.521 kb on - strand at 883.524 kb on + strand at 883.524 kb on + strand at 883.524 kb on + strand at 883.525 kb on - strand at 883.528 kb on - strand at 883.528 kb on - strand at 883.530 kb on + strand at 883.530 kb on + strand at 883.530 kb on + strand at 883.530 kb on + strand at 883.534 kb on + strand at 883.542 kb on - strand at 883.542 kb on - strand at 883.542 kb on - strand at 883.545 kb on + strand at 883.545 kb on + strand at 883.545 kb on + strand at 883.545 kb on + strand at 883.545 kb on + strand at 883.546 kb on - strand at 883.546 kb on - strand at 883.546 kb on - strand at 883.549 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 881,809 + +0.7 881,811 + -0.8 881,811 + +0.7 881,817 + +0.0 881,817 + +0.3 881,817 + -0.4 881,818 - +0.3 881,846 + -1.7 881,846 + +0.1 881,869 + -0.5 881,869 + -1.0 881,869 + -0.1 881,870 - -0.0 881,870 - -0.3 881,874 - +1.1 881,920 + Echvi_0781 0.14 -1.7 881,923 + Echvi_0781 0.14 -0.4 881,923 + Echvi_0781 0.14 -0.8 881,925 + Echvi_0781 0.14 -3.4 881,974 - Echvi_0781 0.20 +2.2 882,006 + Echvi_0781 0.24 -1.5 882,007 - Echvi_0781 0.25 -0.2 882,017 + Echvi_0781 0.26 -0.8 882,017 + Echvi_0781 0.26 -1.0 882,022 - Echvi_0781 0.27 -0.1 882,022 - Echvi_0781 0.27 +0.6 882,069 + Echvi_0781 0.32 -1.1 882,109 + Echvi_0781 0.38 +0.2 882,110 - Echvi_0781 0.38 +0.9 882,121 - Echvi_0781 0.39 -1.5 882,217 + Echvi_0781 0.51 -1.3 882,217 + Echvi_0781 0.51 -0.7 882,217 + Echvi_0781 0.51 -0.9 882,217 + Echvi_0781 0.51 -0.9 882,217 + Echvi_0781 0.51 -1.3 882,217 + Echvi_0781 0.51 -1.3 882,217 + Echvi_0781 0.51 -3.2 882,218 - Echvi_0781 0.51 -0.7 882,218 - Echvi_0781 0.51 +1.2 882,218 - Echvi_0781 0.51 +1.1 882,218 - Echvi_0781 0.51 +3.1 882,219 + Echvi_0781 0.51 -0.9 882,219 + Echvi_0781 0.51 -1.4 882,219 + Echvi_0781 0.51 +0.1 882,219 + Echvi_0781 0.51 -0.9 882,219 + Echvi_0781 0.51 -0.8 882,219 + Echvi_0781 0.51 -2.4 882,232 - Echvi_0781 0.53 -0.1 882,239 - Echvi_0781 0.54 -1.7 882,283 + Echvi_0781 0.59 -1.6 882,284 - Echvi_0781 0.60 +0.9 882,284 - Echvi_0781 0.60 -0.6 882,284 - Echvi_0781 0.60 +0.3 882,337 - Echvi_0781 0.66 -0.2 882,347 + Echvi_0781 0.68 -1.8 882,348 - Echvi_0781 0.68 -0.7 882,452 - Echvi_0781 0.81 -0.7 882,476 - Echvi_0781 0.84 +0.5 882,482 + Echvi_0781 0.85 -2.8 882,483 - Echvi_0781 0.85 +0.9 882,483 - Echvi_0781 0.85 -0.3 882,485 - Echvi_0781 0.85 -0.3 882,485 - Echvi_0781 0.85 -0.1 882,485 - Echvi_0781 0.85 +0.8 882,486 + Echvi_0781 0.85 -2.1 882,487 - Echvi_0781 0.85 +1.2 882,487 - Echvi_0781 0.85 +0.9 882,487 - Echvi_0781 0.85 -1.0 882,487 - Echvi_0781 0.85 +0.2 882,489 + Echvi_0781 0.85 -2.5 882,489 + Echvi_0781 0.85 -1.0 882,490 - Echvi_0781 0.86 +0.1 882,490 - Echvi_0781 0.86 -0.8 882,492 + Echvi_0781 0.86 -1.0 882,492 + Echvi_0781 0.86 -2.1 882,493 - Echvi_0781 0.86 -1.3 882,538 - -0.3 882,545 + +1.2 882,550 - -0.3 882,609 + -0.3 882,610 - -0.3 882,627 + +0.1 882,627 + -1.4 882,667 - -0.6 882,717 - Echvi_0782 0.12 -0.7 882,776 + Echvi_0782 0.18 -0.1 882,827 + Echvi_0782 0.24 -3.0 882,827 + Echvi_0782 0.24 +1.1 882,827 + Echvi_0782 0.24 -0.1 882,827 + Echvi_0782 0.24 +0.3 882,831 + Echvi_0782 0.24 -0.1 882,831 + Echvi_0782 0.24 -0.3 882,831 + Echvi_0782 0.24 -2.3 882,831 + Echvi_0782 0.24 -0.8 882,831 + +0.3 882,831 + Echvi_0782 0.24 -1.3 882,831 + Echvi_0782 0.24 +2.7 882,831 + Echvi_0782 0.24 -1.3 882,832 - Echvi_0782 0.25 +0.9 882,832 - Echvi_0782 0.25 -0.5 882,832 - Echvi_0782 0.25 +0.3 882,832 - Echvi_0782 0.25 +0.3 882,839 + Echvi_0782 0.25 +0.8 882,884 - Echvi_0782 0.30 -1.9 882,884 - Echvi_0782 0.30 -1.5 882,885 + Echvi_0782 0.30 -2.1 882,886 - Echvi_0782 0.30 -1.1 882,913 - Echvi_0782 0.33 -1.1 882,942 + Echvi_0782 0.36 +0.2 882,942 + Echvi_0782 0.36 +0.3 882,942 + Echvi_0782 0.36 +0.8 882,943 - Echvi_0782 0.37 -0.7 882,976 - Echvi_0782 0.40 +0.8 882,976 - Echvi_0782 0.40 +1.0 882,987 + Echvi_0782 0.41 -0.1 882,988 - Echvi_0782 0.41 -0.1 882,988 - Echvi_0782 0.41 +0.4 882,995 - Echvi_0782 0.42 -0.7 883,009 + Echvi_0782 0.44 -0.2 883,009 + Echvi_0782 0.44 -0.1 883,009 + Echvi_0782 0.44 -0.3 883,010 - Echvi_0782 0.44 -0.7 883,056 + Echvi_0782 0.49 -1.7 883,146 - Echvi_0782 0.59 +0.5 883,147 + Echvi_0782 0.59 +1.4 883,148 - Echvi_0782 0.59 +0.7 883,153 - Echvi_0782 0.59 +1.5 883,228 + Echvi_0782 0.68 -1.3 883,233 + Echvi_0782 0.68 +0.2 883,237 + Echvi_0782 0.69 -0.1 883,237 + Echvi_0782 0.69 +0.1 883,237 + Echvi_0782 0.69 +0.1 883,237 + Echvi_0782 0.69 +1.3 883,237 + Echvi_0782 0.69 +1.1 883,237 + Echvi_0782 0.69 -0.7 883,237 + Echvi_0782 0.69 -0.3 883,238 - Echvi_0782 0.69 +0.5 883,238 - Echvi_0782 0.69 +3.2 883,238 - Echvi_0782 0.69 -1.9 883,238 - Echvi_0782 0.69 +0.5 883,238 - Echvi_0782 0.69 +0.2 883,238 - Echvi_0782 0.69 +0.8 883,239 + Echvi_0782 0.69 +0.4 883,239 + Echvi_0782 0.69 +1.5 883,239 + Echvi_0782 0.69 +0.2 883,239 + Echvi_0782 0.69 -0.4 883,239 + Echvi_0782 0.69 -0.3 883,240 - Echvi_0782 0.69 -0.5 883,240 - Echvi_0782 0.69 +0.7 883,365 + Echvi_0782 0.82 -0.1 883,366 - Echvi_0782 0.83 +1.3 883,366 - Echvi_0782 0.83 +0.1 883,520 + -0.7 883,521 - +0.1 883,521 - -2.3 883,524 + +0.3 883,524 + +1.4 883,524 + +1.7 883,525 - +0.2 883,528 - -1.2 883,528 - -0.7 883,530 + +0.4 883,530 + +0.6 883,530 + +0.4 883,530 + -1.1 883,534 + -0.1 883,542 - -2.0 883,542 - +1.0 883,542 - -0.9 883,545 + +0.3 883,545 + +0.0 883,545 + +2.9 883,545 + -0.7 883,545 + -0.1 883,546 - -0.0 883,546 - -0.9 883,546 - +0.2 883,549 - -1.6
Or see this region's nucleotide sequence