Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0632 and Echvi_0633 overlap by 8 nucleotides Echvi_0633 and Echvi_0634 overlap by 50 nucleotides Echvi_0634 and Echvi_0635 are separated by 92 nucleotides Echvi_0635 and Echvi_0636 overlap by 11 nucleotides Echvi_0636 and Echvi_0637 are separated by 24 nucleotides
Echvi_0632: Echvi_0632 - Parvulin-like peptidyl-prolyl isomerase, at 715,078 to 716,484
_0632
Echvi_0633: Echvi_0633 - hypothetical protein, at 716,477 to 717,400
_0633
Echvi_0634: Echvi_0634 - Parvulin-like peptidyl-prolyl isomerase, at 717,351 to 719,366
_0634
Echvi_0635: Echvi_0635 - Anti-sigma regulatory factor (Ser/Thr protein kinase), at 719,459 to 719,887
_0635
Echvi_0636: Echvi_0636 - anti-anti-sigma factor, at 719,877 to 720,221
_0636
Echvi_0637: Echvi_0637 - Serine phosphatase RsbU, regulator of sigma subunit, at 720,246 to 722,312
_0637
Position (kb) 717
718
719
720 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 716.552 kb on + strand at 716.552 kb on + strand at 716.563 kb on + strand at 716.578 kb on + strand, within Echvi_0633 at 716.652 kb on + strand, within Echvi_0633 at 716.653 kb on - strand, within Echvi_0633 at 716.656 kb on + strand, within Echvi_0633 at 716.656 kb on + strand, within Echvi_0633 at 716.656 kb on + strand, within Echvi_0633 at 716.657 kb on - strand, within Echvi_0633 at 716.657 kb on - strand, within Echvi_0633 at 716.657 kb on - strand, within Echvi_0633 at 716.657 kb on - strand, within Echvi_0633 at 716.657 kb on - strand, within Echvi_0633 at 716.658 kb on + strand, within Echvi_0633 at 716.658 kb on + strand, within Echvi_0633 at 716.659 kb on - strand, within Echvi_0633 at 716.714 kb on - strand, within Echvi_0633 at 716.787 kb on + strand, within Echvi_0633 at 716.873 kb on - strand, within Echvi_0633 at 716.941 kb on + strand, within Echvi_0633 at 716.958 kb on + strand, within Echvi_0633 at 716.959 kb on - strand, within Echvi_0633 at 717.010 kb on + strand, within Echvi_0633 at 717.013 kb on - strand, within Echvi_0633 at 717.013 kb on - strand, within Echvi_0633 at 717.024 kb on + strand, within Echvi_0633 at 717.025 kb on - strand, within Echvi_0633 at 717.045 kb on + strand, within Echvi_0633 at 717.046 kb on - strand, within Echvi_0633 at 717.049 kb on + strand, within Echvi_0633 at 717.049 kb on + strand, within Echvi_0633 at 717.049 kb on + strand, within Echvi_0633 at 717.050 kb on - strand, within Echvi_0633 at 717.050 kb on - strand, within Echvi_0633 at 717.050 kb on - strand, within Echvi_0633 at 717.051 kb on + strand, within Echvi_0633 at 717.051 kb on + strand, within Echvi_0633 at 717.059 kb on + strand, within Echvi_0633 at 717.118 kb on + strand, within Echvi_0633 at 717.118 kb on + strand, within Echvi_0633 at 717.118 kb on + strand, within Echvi_0633 at 717.119 kb on - strand, within Echvi_0633 at 717.169 kb on + strand, within Echvi_0633 at 717.225 kb on + strand, within Echvi_0633 at 717.225 kb on + strand, within Echvi_0633 at 717.226 kb on - strand, within Echvi_0633 at 717.226 kb on - strand, within Echvi_0633 at 717.307 kb on + strand, within Echvi_0633 at 717.307 kb on + strand, within Echvi_0633 at 717.308 kb on - strand at 717.338 kb on + strand at 717.339 kb on - strand at 717.339 kb on - strand at 717.339 kb on - strand at 717.352 kb on + strand at 717.353 kb on - strand at 717.372 kb on - strand at 717.430 kb on - strand at 717.430 kb on - strand at 717.539 kb on + strand at 717.539 kb on + strand at 717.540 kb on - strand at 717.540 kb on - strand at 717.540 kb on - strand at 717.540 kb on - strand at 717.541 kb on + strand at 717.542 kb on - strand at 717.542 kb on - strand at 717.542 kb on - strand at 717.542 kb on - strand at 717.560 kb on + strand, within Echvi_0634 at 717.609 kb on - strand, within Echvi_0634 at 717.625 kb on - strand, within Echvi_0634 at 717.649 kb on - strand, within Echvi_0634 at 717.730 kb on - strand, within Echvi_0634 at 717.756 kb on + strand, within Echvi_0634 at 717.796 kb on + strand, within Echvi_0634 at 717.797 kb on - strand, within Echvi_0634 at 717.797 kb on - strand, within Echvi_0634 at 718.029 kb on + strand, within Echvi_0634 at 718.030 kb on - strand, within Echvi_0634 at 718.098 kb on - strand, within Echvi_0634 at 718.107 kb on - strand, within Echvi_0634 at 718.107 kb on - strand, within Echvi_0634 at 718.107 kb on - strand, within Echvi_0634 at 718.107 kb on - strand, within Echvi_0634 at 718.107 kb on - strand, within Echvi_0634 at 718.107 kb on - strand, within Echvi_0634 at 718.130 kb on + strand, within Echvi_0634 at 718.130 kb on + strand, within Echvi_0634 at 718.131 kb on - strand, within Echvi_0634 at 718.132 kb on + strand, within Echvi_0634 at 718.132 kb on + strand, within Echvi_0634 at 718.132 kb on + strand, within Echvi_0634 at 718.132 kb on + strand, within Echvi_0634 at 718.133 kb on - strand, within Echvi_0634 at 718.137 kb on - strand, within Echvi_0634 at 718.137 kb on - strand, within Echvi_0634 at 718.151 kb on + strand, within Echvi_0634 at 718.152 kb on - strand, within Echvi_0634 at 718.152 kb on - strand, within Echvi_0634 at 718.152 kb on - strand, within Echvi_0634 at 718.205 kb on + strand, within Echvi_0634 at 718.259 kb on + strand, within Echvi_0634 at 718.259 kb on + strand, within Echvi_0634 at 718.319 kb on - strand, within Echvi_0634 at 718.366 kb on + strand, within Echvi_0634 at 718.493 kb on + strand, within Echvi_0634 at 718.507 kb on - strand, within Echvi_0634 at 718.533 kb on - strand, within Echvi_0634 at 718.533 kb on - strand, within Echvi_0634 at 718.555 kb on + strand, within Echvi_0634 at 718.555 kb on + strand, within Echvi_0634 at 718.555 kb on + strand, within Echvi_0634 at 718.556 kb on - strand, within Echvi_0634 at 718.735 kb on + strand, within Echvi_0634 at 718.736 kb on - strand, within Echvi_0634 at 718.756 kb on + strand, within Echvi_0634 at 718.757 kb on - strand, within Echvi_0634 at 718.796 kb on + strand, within Echvi_0634 at 718.797 kb on - strand, within Echvi_0634 at 718.825 kb on + strand, within Echvi_0634 at 718.826 kb on - strand, within Echvi_0634 at 718.845 kb on - strand, within Echvi_0634 at 718.946 kb on + strand, within Echvi_0634 at 718.946 kb on + strand, within Echvi_0634 at 718.947 kb on - strand, within Echvi_0634 at 718.947 kb on - strand, within Echvi_0634 at 718.947 kb on - strand, within Echvi_0634 at 718.947 kb on - strand, within Echvi_0634 at 718.947 kb on - strand, within Echvi_0634 at 718.981 kb on + strand, within Echvi_0634 at 718.982 kb on - strand, within Echvi_0634 at 719.025 kb on - strand, within Echvi_0634 at 719.026 kb on + strand, within Echvi_0634 at 719.038 kb on - strand, within Echvi_0634 at 719.123 kb on + strand, within Echvi_0634 at 719.123 kb on + strand, within Echvi_0634 at 719.125 kb on + strand, within Echvi_0634 at 719.125 kb on + strand, within Echvi_0634 at 719.130 kb on + strand, within Echvi_0634 at 719.220 kb on - strand at 719.220 kb on - strand at 719.264 kb on - strand at 719.281 kb on - strand at 719.328 kb on + strand at 719.329 kb on - strand at 719.353 kb on + strand at 719.353 kb on + strand at 719.353 kb on + strand at 719.354 kb on - strand at 719.357 kb on + strand at 719.369 kb on + strand at 719.369 kb on + strand at 719.369 kb on + strand at 719.373 kb on + strand at 719.374 kb on - strand at 719.374 kb on - strand at 719.374 kb on - strand at 719.374 kb on - strand at 719.439 kb on + strand at 719.439 kb on + strand at 719.439 kb on + strand at 719.439 kb on + strand at 719.439 kb on + strand at 719.439 kb on + strand at 719.439 kb on + strand at 719.439 kb on + strand at 719.440 kb on - strand at 719.440 kb on - strand at 719.440 kb on - strand at 719.453 kb on + strand at 719.873 kb on + strand at 719.873 kb on + strand at 719.912 kb on + strand, within Echvi_0636 at 719.912 kb on + strand, within Echvi_0636 at 719.958 kb on + strand at 719.959 kb on - strand, within Echvi_0636 at 719.967 kb on + strand, within Echvi_0636 at 719.967 kb on + strand, within Echvi_0636 at 719.968 kb on - strand, within Echvi_0636 at 720.028 kb on + strand, within Echvi_0636 at 720.035 kb on + strand, within Echvi_0636 at 720.036 kb on - strand, within Echvi_0636 at 720.045 kb on + strand, within Echvi_0636 at 720.046 kb on - strand, within Echvi_0636 at 720.062 kb on + strand, within Echvi_0636 at 720.063 kb on - strand, within Echvi_0636 at 720.069 kb on + strand, within Echvi_0636 at 720.069 kb on + strand, within Echvi_0636 at 720.070 kb on - strand, within Echvi_0636 at 720.124 kb on - strand, within Echvi_0636 at 720.124 kb on - strand, within Echvi_0636 at 720.149 kb on + strand, within Echvi_0636 at 720.149 kb on + strand, within Echvi_0636 at 720.185 kb on + strand, within Echvi_0636 at 720.185 kb on + strand, within Echvi_0636 at 720.186 kb on - strand, within Echvi_0636 at 720.186 kb on - strand, within Echvi_0636 at 720.186 kb on - strand, within Echvi_0636 at 720.186 kb on - strand, within Echvi_0636 at 720.209 kb on + strand at 720.210 kb on - strand at 720.221 kb on + strand at 720.221 kb on + strand at 720.221 kb on + strand at 720.222 kb on - strand at 720.222 kb on - strand at 720.222 kb on - strand at 720.229 kb on + strand at 720.230 kb on - strand at 720.231 kb on + strand at 720.231 kb on + strand at 720.231 kb on + strand at 720.231 kb on + strand at 720.231 kb on + strand at 720.231 kb on + strand at 720.283 kb on + strand at 720.284 kb on - strand at 720.284 kb on - strand at 720.336 kb on + strand at 720.337 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 716,552 + -0.9 716,552 + -1.1 716,563 + -0.9 716,578 + Echvi_0633 0.11 -1.0 716,652 + Echvi_0633 0.19 +1.6 716,653 - Echvi_0633 0.19 -0.6 716,656 + Echvi_0633 0.19 -1.5 716,656 + Echvi_0633 0.19 -1.7 716,656 + Echvi_0633 0.19 +2.3 716,657 - Echvi_0633 0.19 -0.7 716,657 - Echvi_0633 0.19 +1.7 716,657 - Echvi_0633 0.19 -0.1 716,657 - Echvi_0633 0.19 -0.1 716,657 - Echvi_0633 0.19 +0.3 716,658 + Echvi_0633 0.20 -0.9 716,658 + Echvi_0633 0.20 -0.1 716,659 - Echvi_0633 0.20 +0.5 716,714 - Echvi_0633 0.26 -0.5 716,787 + Echvi_0633 0.34 -2.9 716,873 - Echvi_0633 0.43 +1.8 716,941 + Echvi_0633 0.50 -1.6 716,958 + Echvi_0633 0.52 -0.8 716,959 - Echvi_0633 0.52 +0.8 717,010 + Echvi_0633 0.58 -2.0 717,013 - Echvi_0633 0.58 -0.6 717,013 - Echvi_0633 0.58 -0.7 717,024 + Echvi_0633 0.59 +0.3 717,025 - Echvi_0633 0.59 -0.4 717,045 + Echvi_0633 0.61 -1.0 717,046 - Echvi_0633 0.62 +2.1 717,049 + Echvi_0633 0.62 +0.1 717,049 + Echvi_0633 0.62 -1.6 717,049 + Echvi_0633 0.62 -1.9 717,050 - Echvi_0633 0.62 +1.1 717,050 - Echvi_0633 0.62 +0.8 717,050 - Echvi_0633 0.62 +0.4 717,051 + Echvi_0633 0.62 -0.2 717,051 + Echvi_0633 0.62 -1.0 717,059 + Echvi_0633 0.63 +0.4 717,118 + Echvi_0633 0.69 -0.7 717,118 + Echvi_0633 0.69 -1.4 717,118 + Echvi_0633 0.69 +0.3 717,119 - Echvi_0633 0.69 +0.7 717,169 + Echvi_0633 0.75 -1.1 717,225 + Echvi_0633 0.81 -2.8 717,225 + Echvi_0633 0.81 -2.0 717,226 - Echvi_0633 0.81 +0.4 717,226 - Echvi_0633 0.81 -0.1 717,307 + Echvi_0633 0.90 +0.3 717,307 + Echvi_0633 0.90 -2.2 717,308 - +1.8 717,338 + -0.3 717,339 - -0.1 717,339 - +0.4 717,339 - +1.4 717,352 + -0.4 717,353 - +0.5 717,372 - -0.3 717,430 - +0.4 717,430 - -1.5 717,539 + -2.2 717,539 + +0.0 717,540 - -0.9 717,540 - -1.3 717,540 - -2.1 717,540 - +0.4 717,541 + +0.7 717,542 - -0.5 717,542 - -0.3 717,542 - -0.4 717,542 - -0.5 717,560 + Echvi_0634 0.10 -2.3 717,609 - Echvi_0634 0.13 -1.8 717,625 - Echvi_0634 0.14 -0.6 717,649 - Echvi_0634 0.15 +0.7 717,730 - Echvi_0634 0.19 -2.8 717,756 + Echvi_0634 0.20 -1.4 717,796 + Echvi_0634 0.22 -1.4 717,797 - Echvi_0634 0.22 -2.3 717,797 - Echvi_0634 0.22 -1.7 718,029 + Echvi_0634 0.34 -1.6 718,030 - Echvi_0634 0.34 -0.6 718,098 - Echvi_0634 0.37 +1.2 718,107 - Echvi_0634 0.38 -0.4 718,107 - Echvi_0634 0.38 -0.5 718,107 - Echvi_0634 0.38 -1.0 718,107 - Echvi_0634 0.38 -0.2 718,107 - Echvi_0634 0.38 +0.8 718,107 - Echvi_0634 0.38 -0.7 718,130 + Echvi_0634 0.39 -0.9 718,130 + Echvi_0634 0.39 -0.6 718,131 - Echvi_0634 0.39 +0.4 718,132 + Echvi_0634 0.39 -3.1 718,132 + Echvi_0634 0.39 -0.6 718,132 + Echvi_0634 0.39 -2.1 718,132 + Echvi_0634 0.39 -1.9 718,133 - Echvi_0634 0.39 -0.6 718,137 - Echvi_0634 0.39 -0.2 718,137 - Echvi_0634 0.39 -2.5 718,151 + Echvi_0634 0.40 -0.9 718,152 - Echvi_0634 0.40 -1.4 718,152 - Echvi_0634 0.40 -1.1 718,152 - Echvi_0634 0.40 -0.6 718,205 + Echvi_0634 0.42 -0.1 718,259 + Echvi_0634 0.45 -1.0 718,259 + Echvi_0634 0.45 -1.3 718,319 - Echvi_0634 0.48 -2.1 718,366 + Echvi_0634 0.50 -1.4 718,493 + Echvi_0634 0.57 -3.3 718,507 - Echvi_0634 0.57 -2.5 718,533 - Echvi_0634 0.59 -0.6 718,533 - Echvi_0634 0.59 -2.2 718,555 + Echvi_0634 0.60 -2.3 718,555 + Echvi_0634 0.60 -0.6 718,555 + Echvi_0634 0.60 -1.2 718,556 - Echvi_0634 0.60 +0.5 718,735 + Echvi_0634 0.69 -1.3 718,736 - Echvi_0634 0.69 -1.3 718,756 + Echvi_0634 0.70 -2.8 718,757 - Echvi_0634 0.70 -0.8 718,796 + Echvi_0634 0.72 -2.9 718,797 - Echvi_0634 0.72 +0.3 718,825 + Echvi_0634 0.73 -0.7 718,826 - Echvi_0634 0.73 -0.1 718,845 - Echvi_0634 0.74 +1.9 718,946 + Echvi_0634 0.79 -0.6 718,946 + Echvi_0634 0.79 -2.2 718,947 - Echvi_0634 0.79 -0.6 718,947 - Echvi_0634 0.79 +1.7 718,947 - Echvi_0634 0.79 -0.1 718,947 - Echvi_0634 0.79 -0.6 718,947 - Echvi_0634 0.79 +0.7 718,981 + Echvi_0634 0.81 -0.9 718,982 - Echvi_0634 0.81 -0.5 719,025 - Echvi_0634 0.83 +0.3 719,026 + Echvi_0634 0.83 -3.3 719,038 - Echvi_0634 0.84 +0.6 719,123 + Echvi_0634 0.88 -1.1 719,123 + Echvi_0634 0.88 +1.7 719,125 + Echvi_0634 0.88 -2.9 719,125 + Echvi_0634 0.88 -1.1 719,130 + Echvi_0634 0.88 -2.5 719,220 - -0.3 719,220 - +0.1 719,264 - -0.0 719,281 - -0.4 719,328 + -0.2 719,329 - +1.0 719,353 + -1.9 719,353 + -1.8 719,353 + -2.8 719,354 - +0.4 719,357 + -2.8 719,369 + +0.4 719,369 + -1.1 719,369 + -0.9 719,373 + -0.4 719,374 - -0.3 719,374 - +0.8 719,374 - -0.0 719,374 - -0.6 719,439 + -0.5 719,439 + -0.3 719,439 + -0.1 719,439 + +0.5 719,439 + +0.8 719,439 + -0.4 719,439 + -0.0 719,439 + -0.3 719,440 - -0.6 719,440 - +0.6 719,440 - -0.7 719,453 + -0.4 719,873 + +0.5 719,873 + -0.3 719,912 + Echvi_0636 0.10 +0.3 719,912 + Echvi_0636 0.10 -0.6 719,958 + +1.7 719,959 - Echvi_0636 0.24 -0.5 719,967 + Echvi_0636 0.26 +0.3 719,967 + Echvi_0636 0.26 -2.4 719,968 - Echvi_0636 0.26 -1.1 720,028 + Echvi_0636 0.44 -0.9 720,035 + Echvi_0636 0.46 -1.1 720,036 - Echvi_0636 0.46 +0.8 720,045 + Echvi_0636 0.49 -1.2 720,046 - Echvi_0636 0.49 -2.6 720,062 + Echvi_0636 0.54 -0.2 720,063 - Echvi_0636 0.54 +0.1 720,069 + Echvi_0636 0.56 -0.2 720,069 + Echvi_0636 0.56 -1.3 720,070 - Echvi_0636 0.56 +0.8 720,124 - Echvi_0636 0.72 +1.1 720,124 - Echvi_0636 0.72 -1.0 720,149 + Echvi_0636 0.79 -0.3 720,149 + Echvi_0636 0.79 -0.3 720,185 + Echvi_0636 0.89 +0.0 720,185 + Echvi_0636 0.89 -2.4 720,186 - Echvi_0636 0.90 -0.5 720,186 - Echvi_0636 0.90 -1.6 720,186 - Echvi_0636 0.90 -2.0 720,186 - Echvi_0636 0.90 -0.6 720,209 + +0.7 720,210 - -0.2 720,221 + -1.2 720,221 + +0.3 720,221 + -0.8 720,222 - +2.7 720,222 - +0.4 720,222 - +0.4 720,229 + -1.4 720,230 - -0.6 720,231 + +1.1 720,231 + +2.3 720,231 + -1.2 720,231 + +0.7 720,231 + +0.4 720,231 + -1.6 720,283 + +0.7 720,284 - +1.1 720,284 - -1.1 720,336 + +1.7 720,337 - -0.3
Or see this region's nucleotide sequence