Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0483 and Echvi_0484 are separated by 34 nucleotides Echvi_0484 and Echvi_0485 are separated by 270 nucleotides Echvi_0485 and Echvi_0486 are separated by 92 nucleotides
Echvi_0483: Echvi_0483 - hypothetical protein, at 531,703 to 532,836
_0483
Echvi_0484: Echvi_0484 - hypothetical protein, at 532,871 to 532,999
_0484
Echvi_0485: Echvi_0485 - Beta-galactosidase/beta-glucuronidase, at 533,270 to 536,386
_0485
Echvi_0486: Echvi_0486 - Beta-xylosidase, at 536,479 to 538,623
_0486
Position (kb) 533
534
535
536
537 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 532.313 kb on + strand, within Echvi_0483 at 532.314 kb on - strand, within Echvi_0483 at 532.350 kb on + strand, within Echvi_0483 at 532.352 kb on + strand, within Echvi_0483 at 532.352 kb on + strand, within Echvi_0483 at 532.353 kb on - strand, within Echvi_0483 at 532.353 kb on - strand, within Echvi_0483 at 532.469 kb on - strand, within Echvi_0483 at 532.483 kb on + strand, within Echvi_0483 at 532.529 kb on + strand, within Echvi_0483 at 532.534 kb on + strand, within Echvi_0483 at 532.676 kb on + strand, within Echvi_0483 at 532.677 kb on - strand, within Echvi_0483 at 532.677 kb on - strand, within Echvi_0483 at 532.677 kb on - strand, within Echvi_0483 at 532.677 kb on - strand, within Echvi_0483 at 532.679 kb on + strand, within Echvi_0483 at 532.680 kb on - strand, within Echvi_0483 at 532.680 kb on - strand, within Echvi_0483 at 532.680 kb on - strand, within Echvi_0483 at 532.719 kb on + strand, within Echvi_0483 at 532.806 kb on + strand at 532.812 kb on + strand at 532.812 kb on + strand at 532.814 kb on + strand at 532.847 kb on + strand at 532.897 kb on + strand, within Echvi_0484 at 532.915 kb on - strand, within Echvi_0484 at 532.998 kb on - strand at 533.022 kb on + strand at 533.063 kb on + strand at 533.064 kb on - strand at 533.064 kb on - strand at 533.067 kb on - strand at 533.135 kb on + strand at 533.139 kb on + strand at 533.140 kb on - strand at 533.202 kb on + strand at 533.209 kb on + strand at 533.210 kb on - strand at 533.249 kb on - strand at 533.256 kb on + strand at 533.292 kb on + strand at 533.292 kb on + strand at 533.293 kb on - strand at 533.299 kb on - strand at 533.356 kb on + strand at 533.357 kb on - strand at 533.416 kb on + strand at 533.417 kb on - strand at 533.425 kb on + strand at 533.426 kb on - strand at 533.426 kb on - strand at 533.504 kb on + strand at 533.504 kb on + strand at 533.505 kb on - strand at 533.534 kb on - strand at 533.559 kb on - strand at 533.595 kb on + strand, within Echvi_0485 at 533.595 kb on + strand, within Echvi_0485 at 533.596 kb on - strand, within Echvi_0485 at 533.631 kb on + strand, within Echvi_0485 at 533.631 kb on + strand, within Echvi_0485 at 533.632 kb on - strand, within Echvi_0485 at 533.691 kb on + strand, within Echvi_0485 at 533.692 kb on - strand, within Echvi_0485 at 533.692 kb on - strand, within Echvi_0485 at 533.692 kb on - strand, within Echvi_0485 at 533.694 kb on + strand, within Echvi_0485 at 533.789 kb on + strand, within Echvi_0485 at 533.820 kb on + strand, within Echvi_0485 at 533.859 kb on + strand, within Echvi_0485 at 533.877 kb on - strand, within Echvi_0485 at 533.965 kb on + strand, within Echvi_0485 at 533.965 kb on + strand, within Echvi_0485 at 533.965 kb on + strand, within Echvi_0485 at 533.966 kb on - strand, within Echvi_0485 at 533.966 kb on - strand, within Echvi_0485 at 534.027 kb on - strand, within Echvi_0485 at 534.050 kb on + strand, within Echvi_0485 at 534.051 kb on - strand, within Echvi_0485 at 534.058 kb on - strand, within Echvi_0485 at 534.058 kb on - strand, within Echvi_0485 at 534.180 kb on + strand, within Echvi_0485 at 534.318 kb on + strand, within Echvi_0485 at 534.405 kb on + strand, within Echvi_0485 at 534.473 kb on + strand, within Echvi_0485 at 534.622 kb on + strand, within Echvi_0485 at 534.664 kb on + strand, within Echvi_0485 at 534.665 kb on - strand, within Echvi_0485 at 534.730 kb on + strand, within Echvi_0485 at 534.731 kb on - strand, within Echvi_0485 at 534.731 kb on - strand, within Echvi_0485 at 534.751 kb on - strand, within Echvi_0485 at 534.763 kb on + strand, within Echvi_0485 at 534.764 kb on - strand, within Echvi_0485 at 534.814 kb on + strand, within Echvi_0485 at 534.817 kb on + strand, within Echvi_0485 at 534.823 kb on - strand, within Echvi_0485 at 534.823 kb on - strand, within Echvi_0485 at 534.921 kb on + strand, within Echvi_0485 at 534.970 kb on + strand, within Echvi_0485 at 534.970 kb on + strand, within Echvi_0485 at 535.044 kb on + strand, within Echvi_0485 at 535.108 kb on + strand, within Echvi_0485 at 535.128 kb on + strand, within Echvi_0485 at 535.128 kb on + strand, within Echvi_0485 at 535.129 kb on - strand, within Echvi_0485 at 535.129 kb on - strand, within Echvi_0485 at 535.129 kb on - strand, within Echvi_0485 at 535.138 kb on - strand, within Echvi_0485 at 535.155 kb on + strand, within Echvi_0485 at 535.198 kb on + strand, within Echvi_0485 at 535.298 kb on + strand, within Echvi_0485 at 535.346 kb on + strand, within Echvi_0485 at 535.346 kb on + strand, within Echvi_0485 at 535.418 kb on - strand, within Echvi_0485 at 535.418 kb on - strand, within Echvi_0485 at 535.419 kb on + strand, within Echvi_0485 at 535.419 kb on + strand, within Echvi_0485 at 535.419 kb on + strand, within Echvi_0485 at 535.419 kb on + strand, within Echvi_0485 at 535.420 kb on - strand, within Echvi_0485 at 535.431 kb on + strand, within Echvi_0485 at 535.431 kb on + strand, within Echvi_0485 at 535.431 kb on + strand, within Echvi_0485 at 535.453 kb on + strand, within Echvi_0485 at 535.453 kb on + strand, within Echvi_0485 at 535.453 kb on + strand, within Echvi_0485 at 535.453 kb on + strand, within Echvi_0485 at 535.454 kb on - strand, within Echvi_0485 at 535.457 kb on + strand, within Echvi_0485 at 535.458 kb on - strand, within Echvi_0485 at 535.517 kb on - strand, within Echvi_0485 at 535.524 kb on + strand, within Echvi_0485 at 535.524 kb on + strand, within Echvi_0485 at 535.550 kb on + strand, within Echvi_0485 at 535.633 kb on + strand, within Echvi_0485 at 535.634 kb on - strand, within Echvi_0485 at 535.636 kb on - strand, within Echvi_0485 at 535.752 kb on + strand, within Echvi_0485 at 535.793 kb on - strand, within Echvi_0485 at 535.809 kb on - strand, within Echvi_0485 at 535.968 kb on + strand, within Echvi_0485 at 536.001 kb on - strand, within Echvi_0485 at 536.051 kb on - strand, within Echvi_0485 at 536.055 kb on + strand, within Echvi_0485 at 536.056 kb on - strand, within Echvi_0485 at 536.056 kb on - strand, within Echvi_0485 at 536.256 kb on + strand at 536.275 kb on + strand at 536.275 kb on + strand at 536.275 kb on + strand at 536.387 kb on - strand at 536.389 kb on - strand at 536.403 kb on + strand at 536.403 kb on + strand at 536.425 kb on + strand at 536.440 kb on - strand at 536.440 kb on - strand at 536.508 kb on + strand at 536.526 kb on + strand at 536.526 kb on + strand at 536.559 kb on + strand at 536.628 kb on - strand at 536.636 kb on + strand at 536.636 kb on + strand at 536.688 kb on - strand at 536.771 kb on + strand, within Echvi_0486 at 536.816 kb on - strand, within Echvi_0486 at 536.826 kb on - strand, within Echvi_0486 at 536.829 kb on + strand, within Echvi_0486 at 536.948 kb on + strand, within Echvi_0486 at 536.949 kb on - strand, within Echvi_0486 at 537.024 kb on + strand, within Echvi_0486 at 537.073 kb on - strand, within Echvi_0486 at 537.073 kb on - strand, within Echvi_0486 at 537.131 kb on + strand, within Echvi_0486 at 537.135 kb on - strand, within Echvi_0486 at 537.357 kb on + strand, within Echvi_0486 at 537.374 kb on + strand, within Echvi_0486 at 537.374 kb on + strand, within Echvi_0486 at 537.374 kb on + strand, within Echvi_0486 at 537.374 kb on + strand, within Echvi_0486 at 537.374 kb on + strand, within Echvi_0486 at 537.375 kb on - strand, within Echvi_0486 at 537.375 kb on - strand, within Echvi_0486
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 532,313 + Echvi_0483 0.54 +1.2 532,314 - Echvi_0483 0.54 +2.0 532,350 + Echvi_0483 0.57 -0.6 532,352 + Echvi_0483 0.57 -0.5 532,352 + Echvi_0483 0.57 +0.7 532,353 - Echvi_0483 0.57 -1.4 532,353 - Echvi_0483 0.57 -2.1 532,469 - Echvi_0483 0.68 +0.4 532,483 + Echvi_0483 0.69 -1.5 532,529 + Echvi_0483 0.73 -1.5 532,534 + Echvi_0483 0.73 -1.4 532,676 + Echvi_0483 0.86 +0.2 532,677 - Echvi_0483 0.86 -1.2 532,677 - Echvi_0483 0.86 +0.2 532,677 - Echvi_0483 0.86 +0.7 532,677 - Echvi_0483 0.86 +1.1 532,679 + Echvi_0483 0.86 -0.4 532,680 - Echvi_0483 0.86 -0.7 532,680 - Echvi_0483 0.86 +0.0 532,680 - Echvi_0483 0.86 -1.5 532,719 + Echvi_0483 0.90 -0.9 532,806 + +0.3 532,812 + -1.2 532,812 + +0.5 532,814 + -0.6 532,847 + +0.4 532,897 + Echvi_0484 0.20 -0.3 532,915 - Echvi_0484 0.34 -0.1 532,998 - -0.4 533,022 + -0.5 533,063 + -0.6 533,064 - -0.6 533,064 - +0.0 533,067 - -0.1 533,135 + +0.3 533,139 + +0.3 533,140 - -1.1 533,202 + +1.0 533,209 + -1.9 533,210 - -0.5 533,249 - -0.4 533,256 + +1.1 533,292 + -1.0 533,292 + +0.8 533,293 - +0.4 533,299 - -1.1 533,356 + -0.4 533,357 - -0.2 533,416 + -0.0 533,417 - +0.3 533,425 + +0.1 533,426 - -0.6 533,426 - -0.4 533,504 + -0.1 533,504 + -1.6 533,505 - -0.2 533,534 - +1.4 533,559 - +0.7 533,595 + Echvi_0485 0.10 +0.1 533,595 + Echvi_0485 0.10 -1.4 533,596 - Echvi_0485 0.10 -0.5 533,631 + Echvi_0485 0.12 +0.5 533,631 + Echvi_0485 0.12 +1.0 533,632 - Echvi_0485 0.12 +0.7 533,691 + Echvi_0485 0.14 +0.7 533,692 - Echvi_0485 0.14 -0.3 533,692 - Echvi_0485 0.14 +1.0 533,692 - Echvi_0485 0.14 +0.1 533,694 + Echvi_0485 0.14 -0.8 533,789 + Echvi_0485 0.17 +1.3 533,820 + Echvi_0485 0.18 -0.1 533,859 + Echvi_0485 0.19 -0.6 533,877 - Echvi_0485 0.19 +1.1 533,965 + Echvi_0485 0.22 -2.0 533,965 + Echvi_0485 0.22 +2.3 533,965 + Echvi_0485 0.22 -0.0 533,966 - Echvi_0485 0.22 -0.6 533,966 - Echvi_0485 0.22 -0.1 534,027 - Echvi_0485 0.24 -0.7 534,050 + Echvi_0485 0.25 -1.5 534,051 - Echvi_0485 0.25 -0.5 534,058 - Echvi_0485 0.25 +0.5 534,058 - Echvi_0485 0.25 +0.8 534,180 + Echvi_0485 0.29 -0.0 534,318 + Echvi_0485 0.34 -1.0 534,405 + Echvi_0485 0.36 +0.9 534,473 + Echvi_0485 0.39 +1.0 534,622 + Echvi_0485 0.43 +0.7 534,664 + Echvi_0485 0.45 +0.2 534,665 - Echvi_0485 0.45 +1.1 534,730 + Echvi_0485 0.47 +0.7 534,731 - Echvi_0485 0.47 +0.7 534,731 - Echvi_0485 0.47 -0.3 534,751 - Echvi_0485 0.48 +0.0 534,763 + Echvi_0485 0.48 +1.0 534,764 - Echvi_0485 0.48 -0.5 534,814 + Echvi_0485 0.50 +0.3 534,817 + Echvi_0485 0.50 -1.4 534,823 - Echvi_0485 0.50 -0.1 534,823 - Echvi_0485 0.50 -0.9 534,921 + Echvi_0485 0.53 +0.8 534,970 + Echvi_0485 0.55 +0.0 534,970 + Echvi_0485 0.55 -0.2 535,044 + Echvi_0485 0.57 -0.4 535,108 + Echvi_0485 0.59 -0.8 535,128 + Echvi_0485 0.60 +0.4 535,128 + Echvi_0485 0.60 -0.7 535,129 - Echvi_0485 0.60 +0.3 535,129 - Echvi_0485 0.60 -0.0 535,129 - Echvi_0485 0.60 +0.4 535,138 - Echvi_0485 0.60 +1.2 535,155 + Echvi_0485 0.60 +1.4 535,198 + Echvi_0485 0.62 +1.1 535,298 + Echvi_0485 0.65 +0.2 535,346 + Echvi_0485 0.67 -1.0 535,346 + Echvi_0485 0.67 +1.8 535,418 - Echvi_0485 0.69 +0.0 535,418 - Echvi_0485 0.69 -0.4 535,419 + Echvi_0485 0.69 +0.1 535,419 + Echvi_0485 0.69 +0.7 535,419 + Echvi_0485 0.69 -0.9 535,419 + Echvi_0485 0.69 +0.3 535,420 - Echvi_0485 0.69 +0.7 535,431 + Echvi_0485 0.69 +0.1 535,431 + Echvi_0485 0.69 +1.0 535,431 + Echvi_0485 0.69 +0.0 535,453 + Echvi_0485 0.70 -0.1 535,453 + Echvi_0485 0.70 +0.8 535,453 + Echvi_0485 0.70 -0.4 535,453 + Echvi_0485 0.70 +2.7 535,454 - Echvi_0485 0.70 -1.3 535,457 + Echvi_0485 0.70 -1.8 535,458 - Echvi_0485 0.70 -1.1 535,517 - Echvi_0485 0.72 +1.0 535,524 + Echvi_0485 0.72 -0.3 535,524 + Echvi_0485 0.72 -0.6 535,550 + Echvi_0485 0.73 -0.6 535,633 + Echvi_0485 0.76 +0.9 535,634 - Echvi_0485 0.76 +0.8 535,636 - Echvi_0485 0.76 +2.1 535,752 + Echvi_0485 0.80 -1.5 535,793 - Echvi_0485 0.81 +0.5 535,809 - Echvi_0485 0.81 -0.3 535,968 + Echvi_0485 0.87 +1.1 536,001 - Echvi_0485 0.88 +1.2 536,051 - Echvi_0485 0.89 +0.8 536,055 + Echvi_0485 0.89 -1.9 536,056 - Echvi_0485 0.89 -0.9 536,056 - Echvi_0485 0.89 -1.6 536,256 + +0.6 536,275 + +1.4 536,275 + +0.9 536,275 + -0.9 536,387 - -1.0 536,389 - +1.1 536,403 + +0.4 536,403 + -0.7 536,425 + +3.7 536,440 - +1.5 536,440 - +0.1 536,508 + +0.9 536,526 + -1.5 536,526 + +1.1 536,559 + +0.7 536,628 - -1.3 536,636 + -0.9 536,636 + +0.4 536,688 - -0.6 536,771 + Echvi_0486 0.14 +1.1 536,816 - Echvi_0486 0.16 +0.0 536,826 - Echvi_0486 0.16 +2.2 536,829 + Echvi_0486 0.16 +0.5 536,948 + Echvi_0486 0.22 -1.1 536,949 - Echvi_0486 0.22 -1.0 537,024 + Echvi_0486 0.25 -1.0 537,073 - Echvi_0486 0.28 -0.2 537,073 - Echvi_0486 0.28 -0.5 537,131 + Echvi_0486 0.30 +0.5 537,135 - Echvi_0486 0.31 +1.0 537,357 + Echvi_0486 0.41 -0.5 537,374 + Echvi_0486 0.42 +0.1 537,374 + Echvi_0486 0.42 -0.5 537,374 + Echvi_0486 0.42 +0.6 537,374 + Echvi_0486 0.42 +0.4 537,374 + Echvi_0486 0.42 +0.5 537,375 - Echvi_0486 0.42 -0.1 537,375 - Echvi_0486 0.42 +0.9
Or see this region's nucleotide sequence