Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0399 and Echvi_0400 are separated by 11 nucleotides Echvi_0400 and Echvi_0401 are separated by 80 nucleotides
Echvi_0399: Echvi_0399 - Lysophospholipase L1 and related esterases, at 425,115 to 425,825
_0399
Echvi_0400: Echvi_0400 - hypothetical protein, at 425,837 to 428,392
_0400
Echvi_0401: Echvi_0401 - SusD family., at 428,473 to 429,894
_0401
Position (kb) 425
426
427
428
429 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 424.843 kb on + strand at 424.862 kb on + strand at 424.862 kb on + strand at 424.862 kb on + strand at 424.862 kb on + strand at 424.862 kb on + strand at 425.012 kb on + strand at 425.041 kb on + strand at 425.041 kb on + strand at 425.051 kb on + strand at 425.051 kb on + strand at 425.186 kb on + strand, within Echvi_0399 at 425.186 kb on + strand, within Echvi_0399 at 425.186 kb on + strand, within Echvi_0399 at 425.186 kb on + strand, within Echvi_0399 at 425.186 kb on + strand, within Echvi_0399 at 425.186 kb on + strand, within Echvi_0399 at 425.186 kb on + strand, within Echvi_0399 at 425.186 kb on + strand, within Echvi_0399 at 425.187 kb on - strand, within Echvi_0399 at 425.187 kb on - strand, within Echvi_0399 at 425.187 kb on - strand, within Echvi_0399 at 425.187 kb on - strand, within Echvi_0399 at 425.188 kb on + strand, within Echvi_0399 at 425.188 kb on + strand, within Echvi_0399 at 425.189 kb on - strand, within Echvi_0399 at 425.195 kb on + strand, within Echvi_0399 at 425.195 kb on + strand, within Echvi_0399 at 425.196 kb on - strand, within Echvi_0399 at 425.196 kb on - strand, within Echvi_0399 at 425.198 kb on + strand, within Echvi_0399 at 425.199 kb on - strand, within Echvi_0399 at 425.199 kb on - strand, within Echvi_0399 at 425.199 kb on - strand, within Echvi_0399 at 425.367 kb on + strand, within Echvi_0399 at 425.367 kb on + strand, within Echvi_0399 at 425.524 kb on + strand, within Echvi_0399 at 425.588 kb on + strand, within Echvi_0399 at 425.589 kb on - strand, within Echvi_0399 at 425.596 kb on - strand, within Echvi_0399 at 425.600 kb on + strand, within Echvi_0399 at 425.601 kb on - strand, within Echvi_0399 at 425.601 kb on - strand, within Echvi_0399 at 425.603 kb on + strand, within Echvi_0399 at 425.608 kb on + strand, within Echvi_0399 at 425.738 kb on - strand, within Echvi_0399 at 425.738 kb on - strand, within Echvi_0399 at 425.747 kb on + strand, within Echvi_0399 at 425.834 kb on + strand at 425.834 kb on + strand at 425.876 kb on + strand at 425.876 kb on + strand at 425.880 kb on + strand at 425.880 kb on + strand at 425.880 kb on + strand at 425.880 kb on + strand at 425.918 kb on + strand at 425.919 kb on - strand at 425.994 kb on + strand at 425.995 kb on - strand at 425.996 kb on + strand at 425.996 kb on + strand at 425.996 kb on + strand at 426.002 kb on + strand at 426.002 kb on + strand at 426.003 kb on - strand at 426.003 kb on - strand at 426.003 kb on - strand at 426.003 kb on - strand at 426.080 kb on + strand at 426.081 kb on - strand at 426.081 kb on - strand at 426.084 kb on - strand at 426.107 kb on + strand, within Echvi_0400 at 426.144 kb on + strand, within Echvi_0400 at 426.144 kb on + strand, within Echvi_0400 at 426.144 kb on + strand, within Echvi_0400 at 426.144 kb on + strand, within Echvi_0400 at 426.144 kb on + strand, within Echvi_0400 at 426.229 kb on + strand, within Echvi_0400 at 426.364 kb on - strand, within Echvi_0400 at 426.451 kb on - strand, within Echvi_0400 at 426.546 kb on + strand, within Echvi_0400 at 426.546 kb on + strand, within Echvi_0400 at 426.547 kb on - strand, within Echvi_0400 at 426.547 kb on - strand, within Echvi_0400 at 426.641 kb on - strand, within Echvi_0400 at 426.652 kb on - strand, within Echvi_0400 at 426.668 kb on - strand, within Echvi_0400 at 426.703 kb on + strand, within Echvi_0400 at 426.708 kb on - strand, within Echvi_0400 at 426.747 kb on + strand, within Echvi_0400 at 426.747 kb on + strand, within Echvi_0400 at 426.747 kb on + strand, within Echvi_0400 at 426.748 kb on - strand, within Echvi_0400 at 426.848 kb on + strand, within Echvi_0400 at 426.901 kb on + strand, within Echvi_0400 at 426.902 kb on - strand, within Echvi_0400 at 426.902 kb on - strand, within Echvi_0400 at 426.954 kb on + strand, within Echvi_0400 at 426.983 kb on - strand, within Echvi_0400 at 426.999 kb on + strand, within Echvi_0400 at 427.014 kb on + strand, within Echvi_0400 at 427.015 kb on - strand, within Echvi_0400 at 427.053 kb on + strand, within Echvi_0400 at 427.054 kb on - strand, within Echvi_0400 at 427.079 kb on + strand, within Echvi_0400 at 427.080 kb on - strand, within Echvi_0400 at 427.105 kb on + strand, within Echvi_0400 at 427.224 kb on + strand, within Echvi_0400 at 427.267 kb on + strand, within Echvi_0400 at 427.268 kb on - strand, within Echvi_0400 at 427.268 kb on - strand, within Echvi_0400 at 427.268 kb on - strand, within Echvi_0400 at 427.268 kb on - strand, within Echvi_0400 at 427.268 kb on - strand, within Echvi_0400 at 427.269 kb on + strand, within Echvi_0400 at 427.269 kb on + strand, within Echvi_0400 at 427.269 kb on + strand, within Echvi_0400 at 427.270 kb on - strand, within Echvi_0400 at 427.270 kb on - strand, within Echvi_0400 at 427.273 kb on - strand, within Echvi_0400 at 427.283 kb on - strand, within Echvi_0400 at 427.283 kb on - strand, within Echvi_0400 at 427.386 kb on - strand, within Echvi_0400 at 427.386 kb on - strand, within Echvi_0400 at 427.404 kb on + strand, within Echvi_0400 at 427.405 kb on - strand, within Echvi_0400 at 427.405 kb on - strand, within Echvi_0400 at 427.580 kb on - strand, within Echvi_0400 at 427.588 kb on + strand, within Echvi_0400 at 427.636 kb on + strand, within Echvi_0400 at 427.638 kb on + strand, within Echvi_0400 at 427.638 kb on + strand, within Echvi_0400 at 427.764 kb on + strand, within Echvi_0400 at 427.764 kb on + strand, within Echvi_0400 at 427.764 kb on + strand, within Echvi_0400 at 427.765 kb on - strand, within Echvi_0400 at 427.769 kb on - strand, within Echvi_0400 at 427.870 kb on + strand, within Echvi_0400 at 427.925 kb on - strand, within Echvi_0400 at 427.939 kb on + strand, within Echvi_0400 at 427.950 kb on + strand, within Echvi_0400 at 427.977 kb on + strand, within Echvi_0400 at 427.978 kb on - strand, within Echvi_0400 at 428.056 kb on - strand, within Echvi_0400 at 428.056 kb on - strand, within Echvi_0400 at 428.056 kb on - strand, within Echvi_0400 at 428.103 kb on - strand, within Echvi_0400 at 428.205 kb on + strand at 428.251 kb on + strand at 428.252 kb on - strand at 428.252 kb on - strand at 428.277 kb on - strand at 428.277 kb on - strand at 428.320 kb on + strand at 428.393 kb on - strand at 428.393 kb on - strand at 428.396 kb on + strand at 428.396 kb on + strand at 428.397 kb on - strand at 428.397 kb on - strand at 428.397 kb on - strand at 428.461 kb on - strand at 428.466 kb on + strand at 428.467 kb on - strand at 428.474 kb on + strand at 428.474 kb on + strand at 428.580 kb on + strand at 428.581 kb on - strand at 428.585 kb on + strand at 428.586 kb on - strand at 428.723 kb on - strand, within Echvi_0401 at 428.749 kb on + strand, within Echvi_0401 at 428.754 kb on - strand, within Echvi_0401 at 428.754 kb on - strand, within Echvi_0401 at 428.801 kb on + strand, within Echvi_0401 at 428.972 kb on + strand, within Echvi_0401 at 429.054 kb on + strand, within Echvi_0401 at 429.068 kb on + strand, within Echvi_0401 at 429.166 kb on + strand, within Echvi_0401 at 429.166 kb on + strand, within Echvi_0401 at 429.176 kb on + strand, within Echvi_0401 at 429.177 kb on - strand, within Echvi_0401 at 429.177 kb on - strand, within Echvi_0401 at 429.243 kb on - strand, within Echvi_0401 at 429.285 kb on - strand, within Echvi_0401
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 424,843 + +0.5 424,862 + -0.8 424,862 + +1.5 424,862 + -1.4 424,862 + -0.6 424,862 + +0.2 425,012 + -1.3 425,041 + -0.8 425,041 + +0.7 425,051 + +1.4 425,051 + +0.0 425,186 + Echvi_0399 0.10 -1.0 425,186 + Echvi_0399 0.10 -0.3 425,186 + Echvi_0399 0.10 +1.7 425,186 + Echvi_0399 0.10 +0.0 425,186 + Echvi_0399 0.10 -0.3 425,186 + Echvi_0399 0.10 +0.1 425,186 + Echvi_0399 0.10 -0.1 425,186 + Echvi_0399 0.10 +0.9 425,187 - Echvi_0399 0.10 +0.4 425,187 - Echvi_0399 0.10 +1.0 425,187 - Echvi_0399 0.10 +0.2 425,187 - Echvi_0399 0.10 +0.1 425,188 + Echvi_0399 0.10 -1.0 425,188 + Echvi_0399 0.10 -1.0 425,189 - Echvi_0399 0.10 -1.8 425,195 + Echvi_0399 0.11 -1.1 425,195 + Echvi_0399 0.11 -0.5 425,196 - Echvi_0399 0.11 -1.1 425,196 - Echvi_0399 0.11 -0.4 425,198 + Echvi_0399 0.12 -1.5 425,199 - Echvi_0399 0.12 -0.8 425,199 - Echvi_0399 0.12 +0.3 425,199 - Echvi_0399 0.12 +0.9 425,367 + Echvi_0399 0.35 +1.1 425,367 + Echvi_0399 0.35 -1.8 425,524 + Echvi_0399 0.58 +1.6 425,588 + Echvi_0399 0.67 +1.8 425,589 - Echvi_0399 0.67 +0.2 425,596 - Echvi_0399 0.68 -0.9 425,600 + Echvi_0399 0.68 +0.8 425,601 - Echvi_0399 0.68 +0.2 425,601 - Echvi_0399 0.68 +0.0 425,603 + Echvi_0399 0.69 +0.9 425,608 + Echvi_0399 0.69 -0.8 425,738 - Echvi_0399 0.88 -0.9 425,738 - Echvi_0399 0.88 -1.1 425,747 + Echvi_0399 0.89 +0.2 425,834 + -0.6 425,834 + +0.5 425,876 + +0.2 425,876 + +0.1 425,880 + -2.0 425,880 + +1.1 425,880 + +0.6 425,880 + +0.2 425,918 + -0.7 425,919 - +1.1 425,994 + -1.6 425,995 - +0.1 425,996 + -0.5 425,996 + +0.6 425,996 + +0.7 426,002 + +0.3 426,002 + +0.2 426,003 - +0.4 426,003 - +0.2 426,003 - -1.9 426,003 - -1.2 426,080 + -2.5 426,081 - -2.4 426,081 - -0.9 426,084 - +0.8 426,107 + Echvi_0400 0.11 +0.3 426,144 + Echvi_0400 0.12 -0.2 426,144 + Echvi_0400 0.12 -1.2 426,144 + Echvi_0400 0.12 +1.1 426,144 + Echvi_0400 0.12 -0.3 426,144 + Echvi_0400 0.12 +0.3 426,229 + Echvi_0400 0.15 -0.9 426,364 - Echvi_0400 0.21 +1.1 426,451 - Echvi_0400 0.24 +0.5 426,546 + Echvi_0400 0.28 -1.2 426,546 + Echvi_0400 0.28 -0.3 426,547 - Echvi_0400 0.28 +1.9 426,547 - Echvi_0400 0.28 -0.5 426,641 - Echvi_0400 0.31 +1.9 426,652 - Echvi_0400 0.32 -0.1 426,668 - Echvi_0400 0.33 +0.9 426,703 + Echvi_0400 0.34 +0.2 426,708 - Echvi_0400 0.34 -0.9 426,747 + Echvi_0400 0.36 -0.2 426,747 + Echvi_0400 0.36 +0.5 426,747 + Echvi_0400 0.36 +1.3 426,748 - Echvi_0400 0.36 +0.1 426,848 + Echvi_0400 0.40 -0.3 426,901 + Echvi_0400 0.42 +0.7 426,902 - Echvi_0400 0.42 -0.1 426,902 - Echvi_0400 0.42 +0.3 426,954 + Echvi_0400 0.44 +0.5 426,983 - Echvi_0400 0.45 +0.2 426,999 + Echvi_0400 0.45 +0.8 427,014 + Echvi_0400 0.46 -0.5 427,015 - Echvi_0400 0.46 +1.7 427,053 + Echvi_0400 0.48 +0.7 427,054 - Echvi_0400 0.48 +1.7 427,079 + Echvi_0400 0.49 -1.1 427,080 - Echvi_0400 0.49 +0.0 427,105 + Echvi_0400 0.50 -0.0 427,224 + Echvi_0400 0.54 -0.4 427,267 + Echvi_0400 0.56 +0.5 427,268 - Echvi_0400 0.56 -2.2 427,268 - Echvi_0400 0.56 -0.7 427,268 - Echvi_0400 0.56 -0.6 427,268 - Echvi_0400 0.56 -1.1 427,268 - Echvi_0400 0.56 +1.2 427,269 + Echvi_0400 0.56 -1.2 427,269 + Echvi_0400 0.56 +0.7 427,269 + Echvi_0400 0.56 -0.6 427,270 - Echvi_0400 0.56 +0.8 427,270 - Echvi_0400 0.56 +0.7 427,273 - Echvi_0400 0.56 +0.7 427,283 - Echvi_0400 0.57 -0.6 427,283 - Echvi_0400 0.57 -1.5 427,386 - Echvi_0400 0.61 +0.8 427,386 - Echvi_0400 0.61 -1.9 427,404 + Echvi_0400 0.61 +0.5 427,405 - Echvi_0400 0.61 -0.3 427,405 - Echvi_0400 0.61 +1.1 427,580 - Echvi_0400 0.68 -1.3 427,588 + Echvi_0400 0.69 -0.4 427,636 + Echvi_0400 0.70 -0.0 427,638 + Echvi_0400 0.70 +0.5 427,638 + Echvi_0400 0.70 +1.1 427,764 + Echvi_0400 0.75 +0.5 427,764 + Echvi_0400 0.75 -0.1 427,764 + Echvi_0400 0.75 -0.6 427,765 - Echvi_0400 0.75 -1.4 427,769 - Echvi_0400 0.76 +0.8 427,870 + Echvi_0400 0.80 -0.7 427,925 - Echvi_0400 0.82 +1.1 427,939 + Echvi_0400 0.82 +0.1 427,950 + Echvi_0400 0.83 +1.1 427,977 + Echvi_0400 0.84 -0.2 427,978 - Echvi_0400 0.84 -0.9 428,056 - Echvi_0400 0.87 +0.9 428,056 - Echvi_0400 0.87 +1.8 428,056 - Echvi_0400 0.87 -1.3 428,103 - Echvi_0400 0.89 +2.8 428,205 + -0.0 428,251 + -1.5 428,252 - +0.2 428,252 - -0.3 428,277 - -0.0 428,277 - -0.5 428,320 + -0.6 428,393 - -1.5 428,393 - -0.5 428,396 + -0.5 428,396 + +0.2 428,397 - -0.3 428,397 - -2.0 428,397 - +0.3 428,461 - -0.2 428,466 + +0.6 428,467 - -0.7 428,474 + -0.7 428,474 + -0.8 428,580 + +1.2 428,581 - -0.5 428,585 + -0.1 428,586 - -0.4 428,723 - Echvi_0401 0.18 +1.3 428,749 + Echvi_0401 0.19 -0.4 428,754 - Echvi_0401 0.20 -1.1 428,754 - Echvi_0401 0.20 +0.7 428,801 + Echvi_0401 0.23 -0.9 428,972 + Echvi_0401 0.35 +0.6 429,054 + Echvi_0401 0.41 -2.0 429,068 + Echvi_0401 0.42 +1.5 429,166 + Echvi_0401 0.49 -0.1 429,166 + Echvi_0401 0.49 -2.0 429,176 + Echvi_0401 0.49 -0.9 429,177 - Echvi_0401 0.50 -0.4 429,177 - Echvi_0401 0.50 -0.8 429,243 - Echvi_0401 0.54 +0.6 429,285 - Echvi_0401 0.57 -0.3
Or see this region's nucleotide sequence