Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0296 and Echvi_0297 are separated by 75 nucleotides Echvi_0297 and Echvi_0298 are separated by 249 nucleotides
Echvi_0296: Echvi_0296 - hypothetical protein, at 306,355 to 307,203
_0296
Echvi_0297: Echvi_0297 - DNA polymerase III, beta subunit, at 307,279 to 308,403
_0297
Echvi_0298: Echvi_0298 - gliding-associated putative ABC transporter substrate-binding component GldG, at 308,653 to 310,368
_0298
Position (kb) 307
308
309 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 306.281 kb on + strand at 306.281 kb on + strand at 306.281 kb on + strand at 306.281 kb on + strand at 306.284 kb on + strand at 306.285 kb on - strand at 306.287 kb on + strand at 306.310 kb on - strand at 306.312 kb on + strand at 306.312 kb on + strand at 306.313 kb on - strand at 306.318 kb on - strand at 306.318 kb on - strand at 306.323 kb on - strand at 306.323 kb on - strand at 306.351 kb on + strand at 306.351 kb on + strand at 306.351 kb on + strand at 306.352 kb on - strand at 306.414 kb on + strand at 306.414 kb on + strand at 306.414 kb on + strand at 306.422 kb on + strand at 306.422 kb on + strand at 306.422 kb on + strand at 306.422 kb on + strand at 306.423 kb on - strand at 306.469 kb on + strand, within Echvi_0296 at 306.501 kb on - strand, within Echvi_0296 at 306.501 kb on - strand, within Echvi_0296 at 306.648 kb on - strand, within Echvi_0296 at 306.722 kb on + strand, within Echvi_0296 at 306.815 kb on - strand, within Echvi_0296 at 307.006 kb on + strand, within Echvi_0296 at 307.036 kb on + strand, within Echvi_0296 at 307.043 kb on + strand, within Echvi_0296 at 307.044 kb on - strand, within Echvi_0296 at 307.050 kb on + strand, within Echvi_0296 at 307.050 kb on + strand, within Echvi_0296 at 307.051 kb on - strand, within Echvi_0296 at 307.055 kb on + strand, within Echvi_0296 at 307.084 kb on + strand, within Echvi_0296 at 307.085 kb on - strand, within Echvi_0296 at 307.194 kb on + strand at 307.201 kb on + strand at 307.258 kb on + strand at 307.286 kb on + strand at 307.286 kb on + strand at 307.286 kb on + strand at 307.286 kb on + strand at 307.287 kb on - strand at 308.452 kb on - strand at 308.452 kb on - strand at 308.452 kb on - strand at 308.452 kb on - strand at 308.499 kb on - strand at 308.610 kb on + strand at 308.734 kb on + strand at 308.736 kb on + strand at 308.736 kb on + strand at 308.737 kb on - strand at 308.846 kb on + strand, within Echvi_0298 at 308.846 kb on + strand, within Echvi_0298 at 308.846 kb on + strand, within Echvi_0298 at 308.847 kb on - strand, within Echvi_0298 at 308.847 kb on - strand, within Echvi_0298 at 308.851 kb on + strand, within Echvi_0298 at 308.852 kb on - strand, within Echvi_0298 at 308.852 kb on - strand, within Echvi_0298 at 308.856 kb on + strand, within Echvi_0298 at 309.019 kb on + strand, within Echvi_0298 at 309.046 kb on - strand, within Echvi_0298 at 309.230 kb on - strand, within Echvi_0298 at 309.247 kb on + strand, within Echvi_0298 at 309.247 kb on + strand, within Echvi_0298 at 309.247 kb on + strand, within Echvi_0298 at 309.248 kb on - strand, within Echvi_0298 at 309.248 kb on - strand, within Echvi_0298 at 309.317 kb on + strand, within Echvi_0298 at 309.317 kb on + strand, within Echvi_0298 at 309.318 kb on - strand, within Echvi_0298 at 309.384 kb on - strand, within Echvi_0298
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 306,281 + -0.5 306,281 + -0.1 306,281 + -0.9 306,281 + +0.7 306,284 + -1.4 306,285 - -1.1 306,287 + -0.3 306,310 - +0.7 306,312 + -1.7 306,312 + +1.0 306,313 - -1.0 306,318 - +0.5 306,318 - +0.6 306,323 - -0.1 306,323 - -0.5 306,351 + -0.9 306,351 + +0.2 306,351 + -1.6 306,352 - +0.1 306,414 + -1.8 306,414 + +1.0 306,414 + -0.8 306,422 + -0.0 306,422 + -0.3 306,422 + -0.6 306,422 + -1.7 306,423 - +3.5 306,469 + Echvi_0296 0.13 -1.0 306,501 - Echvi_0296 0.17 -0.1 306,501 - Echvi_0296 0.17 +1.6 306,648 - Echvi_0296 0.35 +0.6 306,722 + Echvi_0296 0.43 +0.5 306,815 - Echvi_0296 0.54 -0.2 307,006 + Echvi_0296 0.77 +0.2 307,036 + Echvi_0296 0.80 +0.4 307,043 + Echvi_0296 0.81 -0.6 307,044 - Echvi_0296 0.81 +0.7 307,050 + Echvi_0296 0.82 -0.3 307,050 + Echvi_0296 0.82 -0.8 307,051 - Echvi_0296 0.82 -0.6 307,055 + Echvi_0296 0.82 -0.2 307,084 + Echvi_0296 0.86 +0.2 307,085 - Echvi_0296 0.86 +0.2 307,194 + -0.4 307,201 + +1.4 307,258 + -2.1 307,286 + +0.7 307,286 + -1.7 307,286 + -0.0 307,286 + -1.4 307,287 - -1.1 308,452 - -0.9 308,452 - +1.5 308,452 - -1.9 308,452 - +0.5 308,499 - +0.4 308,610 + +0.5 308,734 + -0.3 308,736 + +0.1 308,736 + +0.6 308,737 - -1.3 308,846 + Echvi_0298 0.11 -1.6 308,846 + Echvi_0298 0.11 -2.2 308,846 + Echvi_0298 0.11 -0.7 308,847 - Echvi_0298 0.11 -0.6 308,847 - Echvi_0298 0.11 -0.7 308,851 + Echvi_0298 0.12 -0.9 308,852 - Echvi_0298 0.12 -1.4 308,852 - Echvi_0298 0.12 -0.0 308,856 + Echvi_0298 0.12 -0.0 309,019 + Echvi_0298 0.21 -0.2 309,046 - Echvi_0298 0.23 +0.4 309,230 - Echvi_0298 0.34 -0.6 309,247 + Echvi_0298 0.35 -0.1 309,247 + Echvi_0298 0.35 -1.7 309,247 + Echvi_0298 0.35 -0.3 309,248 - Echvi_0298 0.35 +0.1 309,248 - Echvi_0298 0.35 +0.1 309,317 + Echvi_0298 0.39 -0.4 309,317 + Echvi_0298 0.39 +0.0 309,318 - Echvi_0298 0.39 -0.6 309,384 - Echvi_0298 0.43 -0.2
Or see this region's nucleotide sequence