Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0283 and Echvi_0284 are separated by 216 nucleotides Echvi_0284 and Echvi_0285 are separated by 6 nucleotides Echvi_0285 and Echvi_0286 are separated by 17 nucleotides Echvi_0286 and Echvi_0287 are separated by 29 nucleotides
Echvi_0283: Echvi_0283 - PAP2 superfamily., at 294,587 to 295,933
_0283
Echvi_0284: Echvi_0284 - nicotinate (nicotinamide) nucleotide adenylyltransferase, at 296,150 to 296,716
_0284
Echvi_0285: Echvi_0285 - guanylate kinase, at 296,723 to 297,295
_0285
Echvi_0286: Echvi_0286 - hypothetical protein, at 297,313 to 297,585
_0286
Echvi_0287: Echvi_0287 - RNA polymerase sigma factor, sigma-70 family, at 297,615 to 298,205
_0287
Position (kb) 296
297
298 Strain fitness (log2 ratio) -1
0
1
2 at 295.748 kb on - strand, within Echvi_0283 at 295.761 kb on - strand, within Echvi_0283 at 295.761 kb on - strand, within Echvi_0283 at 295.772 kb on - strand, within Echvi_0283 at 295.816 kb on + strand at 295.826 kb on - strand at 295.924 kb on + strand at 296.084 kb on + strand at 296.084 kb on + strand at 296.085 kb on - strand at 296.085 kb on - strand at 296.115 kb on + strand at 296.115 kb on + strand at 296.115 kb on + strand at 296.115 kb on + strand at 296.116 kb on - strand at 296.116 kb on - strand at 296.116 kb on - strand at 296.148 kb on + strand at 296.725 kb on - strand at 296.725 kb on - strand at 296.725 kb on - strand at 297.457 kb on - strand, within Echvi_0286 at 297.635 kb on - strand at 297.775 kb on - strand, within Echvi_0287 at 297.775 kb on - strand, within Echvi_0287 at 297.823 kb on - strand, within Echvi_0287 at 297.835 kb on - strand, within Echvi_0287 at 297.873 kb on - strand, within Echvi_0287 at 297.876 kb on - strand, within Echvi_0287 at 297.876 kb on - strand, within Echvi_0287 at 298.055 kb on - strand, within Echvi_0287 at 298.055 kb on - strand, within Echvi_0287 at 298.140 kb on - strand, within Echvi_0287 at 298.236 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 295,748 - Echvi_0283 0.86 -0.2 295,761 - Echvi_0283 0.87 +2.7 295,761 - Echvi_0283 0.87 -0.4 295,772 - Echvi_0283 0.88 -0.3 295,816 + -0.7 295,826 - -0.5 295,924 + +0.6 296,084 + +0.6 296,084 + +0.9 296,085 - -0.5 296,085 - -1.1 296,115 + -0.8 296,115 + +0.6 296,115 + +0.2 296,115 + +0.0 296,116 - -1.1 296,116 - -0.8 296,116 - -0.1 296,148 + +1.0 296,725 - +1.5 296,725 - -0.8 296,725 - +0.7 297,457 - Echvi_0286 0.53 +0.7 297,635 - +0.2 297,775 - Echvi_0287 0.27 -1.1 297,775 - Echvi_0287 0.27 -0.8 297,823 - Echvi_0287 0.35 -0.3 297,835 - Echvi_0287 0.37 -1.3 297,873 - Echvi_0287 0.44 -1.6 297,876 - Echvi_0287 0.44 -1.3 297,876 - Echvi_0287 0.44 -0.8 298,055 - Echvi_0287 0.74 -0.1 298,055 - Echvi_0287 0.74 -0.7 298,140 - Echvi_0287 0.89 -0.5 298,236 - +1.4
Or see this region's nucleotide sequence