Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0280 and Echvi_0281 are separated by 19 nucleotides
Echvi_0280: Echvi_0280 - TonB-linked outer membrane protein, SusC/RagA family, at 286,070 to 289,246
_0280
Echvi_0281: Echvi_0281 - SusD family., at 289,266 to 291,128
_0281
Position (kb) 286
287
288
289
290 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 285.178 kb on + strand at 285.178 kb on + strand at 285.281 kb on + strand at 285.281 kb on + strand at 285.281 kb on + strand at 285.281 kb on + strand at 285.366 kb on + strand at 285.368 kb on + strand at 285.368 kb on + strand at 285.368 kb on + strand at 285.440 kb on + strand at 285.440 kb on + strand at 285.440 kb on + strand at 285.441 kb on - strand at 285.451 kb on - strand at 285.507 kb on + strand at 285.523 kb on - strand at 285.525 kb on - strand at 285.551 kb on + strand at 285.551 kb on + strand at 285.551 kb on + strand at 285.564 kb on + strand at 285.565 kb on - strand at 285.664 kb on + strand at 285.686 kb on + strand at 285.687 kb on - strand at 285.688 kb on + strand at 285.757 kb on + strand at 285.805 kb on - strand at 285.866 kb on + strand at 285.866 kb on + strand at 285.890 kb on + strand at 286.009 kb on + strand at 286.034 kb on + strand at 286.056 kb on + strand at 286.056 kb on + strand at 286.102 kb on + strand at 286.107 kb on + strand at 286.140 kb on + strand at 286.140 kb on + strand at 286.140 kb on + strand at 286.145 kb on + strand at 286.224 kb on + strand at 286.224 kb on + strand at 286.224 kb on + strand at 286.225 kb on - strand at 286.338 kb on + strand at 286.407 kb on + strand, within Echvi_0280 at 286.408 kb on - strand, within Echvi_0280 at 286.410 kb on + strand, within Echvi_0280 at 286.411 kb on - strand, within Echvi_0280 at 286.411 kb on - strand, within Echvi_0280 at 286.411 kb on - strand, within Echvi_0280 at 286.411 kb on - strand, within Echvi_0280 at 286.414 kb on - strand, within Echvi_0280 at 286.414 kb on - strand, within Echvi_0280 at 286.455 kb on + strand, within Echvi_0280 at 286.569 kb on - strand, within Echvi_0280 at 286.601 kb on - strand, within Echvi_0280 at 286.642 kb on + strand, within Echvi_0280 at 286.696 kb on + strand, within Echvi_0280 at 286.730 kb on + strand, within Echvi_0280 at 286.730 kb on + strand, within Echvi_0280 at 286.731 kb on - strand, within Echvi_0280 at 286.834 kb on + strand, within Echvi_0280 at 286.834 kb on + strand, within Echvi_0280 at 286.835 kb on - strand, within Echvi_0280 at 286.869 kb on - strand, within Echvi_0280 at 286.869 kb on - strand, within Echvi_0280 at 286.882 kb on - strand, within Echvi_0280 at 286.957 kb on - strand, within Echvi_0280 at 286.958 kb on + strand, within Echvi_0280 at 286.959 kb on - strand, within Echvi_0280 at 286.960 kb on + strand, within Echvi_0280 at 286.961 kb on - strand, within Echvi_0280 at 286.961 kb on - strand, within Echvi_0280 at 286.996 kb on + strand, within Echvi_0280 at 286.997 kb on - strand, within Echvi_0280 at 287.104 kb on + strand, within Echvi_0280 at 287.104 kb on + strand, within Echvi_0280 at 287.141 kb on + strand, within Echvi_0280 at 287.141 kb on + strand, within Echvi_0280 at 287.142 kb on - strand, within Echvi_0280 at 287.177 kb on + strand, within Echvi_0280 at 287.177 kb on + strand, within Echvi_0280 at 287.178 kb on - strand, within Echvi_0280 at 287.210 kb on + strand, within Echvi_0280 at 287.210 kb on + strand, within Echvi_0280 at 287.211 kb on - strand, within Echvi_0280 at 287.211 kb on - strand, within Echvi_0280 at 287.394 kb on + strand, within Echvi_0280 at 287.394 kb on + strand, within Echvi_0280 at 287.394 kb on + strand, within Echvi_0280 at 287.394 kb on + strand, within Echvi_0280 at 287.462 kb on + strand, within Echvi_0280 at 287.505 kb on + strand, within Echvi_0280 at 287.505 kb on + strand, within Echvi_0280 at 287.560 kb on + strand, within Echvi_0280 at 287.750 kb on - strand, within Echvi_0280 at 287.759 kb on - strand, within Echvi_0280 at 287.819 kb on + strand, within Echvi_0280 at 287.819 kb on + strand, within Echvi_0280 at 287.819 kb on + strand, within Echvi_0280 at 287.820 kb on - strand, within Echvi_0280 at 287.820 kb on - strand, within Echvi_0280 at 287.822 kb on + strand, within Echvi_0280 at 287.822 kb on + strand, within Echvi_0280 at 287.822 kb on + strand, within Echvi_0280 at 287.891 kb on + strand, within Echvi_0280 at 287.891 kb on + strand, within Echvi_0280 at 287.891 kb on + strand, within Echvi_0280 at 287.913 kb on - strand, within Echvi_0280 at 287.932 kb on + strand, within Echvi_0280 at 287.936 kb on + strand, within Echvi_0280 at 287.972 kb on + strand, within Echvi_0280 at 287.972 kb on + strand, within Echvi_0280 at 287.972 kb on + strand, within Echvi_0280 at 287.972 kb on + strand, within Echvi_0280 at 287.973 kb on - strand, within Echvi_0280 at 287.973 kb on - strand, within Echvi_0280 at 287.984 kb on + strand, within Echvi_0280 at 287.984 kb on + strand, within Echvi_0280 at 288.064 kb on + strand, within Echvi_0280 at 288.064 kb on + strand, within Echvi_0280 at 288.106 kb on + strand, within Echvi_0280 at 288.107 kb on - strand, within Echvi_0280 at 288.150 kb on + strand, within Echvi_0280 at 288.150 kb on + strand, within Echvi_0280 at 288.154 kb on - strand, within Echvi_0280 at 288.154 kb on - strand, within Echvi_0280 at 288.162 kb on - strand, within Echvi_0280 at 288.162 kb on - strand, within Echvi_0280 at 288.180 kb on - strand, within Echvi_0280 at 288.180 kb on - strand, within Echvi_0280 at 288.191 kb on - strand, within Echvi_0280 at 288.191 kb on - strand, within Echvi_0280 at 288.191 kb on - strand, within Echvi_0280 at 288.191 kb on - strand, within Echvi_0280 at 288.194 kb on + strand, within Echvi_0280 at 288.248 kb on - strand, within Echvi_0280 at 288.307 kb on - strand, within Echvi_0280 at 288.341 kb on + strand, within Echvi_0280 at 288.494 kb on + strand, within Echvi_0280 at 288.495 kb on - strand, within Echvi_0280 at 288.495 kb on - strand, within Echvi_0280 at 288.495 kb on - strand, within Echvi_0280 at 288.495 kb on - strand, within Echvi_0280 at 288.496 kb on + strand, within Echvi_0280 at 288.508 kb on - strand, within Echvi_0280 at 288.518 kb on + strand, within Echvi_0280 at 288.618 kb on - strand, within Echvi_0280 at 288.710 kb on + strand, within Echvi_0280 at 288.711 kb on - strand, within Echvi_0280 at 288.844 kb on - strand, within Echvi_0280 at 288.844 kb on - strand, within Echvi_0280 at 288.869 kb on + strand, within Echvi_0280 at 288.989 kb on + strand at 288.989 kb on + strand at 288.990 kb on - strand at 289.010 kb on + strand at 289.031 kb on + strand at 289.032 kb on - strand at 289.161 kb on + strand at 289.162 kb on - strand at 289.215 kb on + strand at 289.215 kb on + strand at 289.216 kb on - strand at 289.231 kb on - strand at 289.244 kb on + strand at 289.251 kb on + strand at 289.284 kb on - strand at 289.290 kb on + strand at 289.290 kb on + strand at 289.291 kb on - strand at 289.322 kb on - strand at 289.334 kb on + strand at 289.335 kb on - strand at 289.387 kb on + strand at 289.387 kb on + strand at 289.388 kb on - strand at 289.388 kb on - strand at 289.388 kb on - strand at 289.388 kb on - strand at 289.432 kb on - strand at 289.526 kb on + strand, within Echvi_0281 at 289.526 kb on + strand, within Echvi_0281 at 289.530 kb on - strand, within Echvi_0281 at 289.592 kb on + strand, within Echvi_0281 at 289.593 kb on - strand, within Echvi_0281 at 289.593 kb on - strand, within Echvi_0281 at 289.593 kb on - strand, within Echvi_0281 at 289.593 kb on - strand, within Echvi_0281 at 289.593 kb on - strand, within Echvi_0281 at 289.593 kb on - strand, within Echvi_0281 at 289.596 kb on + strand, within Echvi_0281 at 289.596 kb on + strand, within Echvi_0281 at 289.597 kb on - strand, within Echvi_0281 at 289.597 kb on - strand, within Echvi_0281 at 289.597 kb on - strand, within Echvi_0281 at 289.597 kb on - strand, within Echvi_0281 at 289.597 kb on - strand, within Echvi_0281 at 289.597 kb on - strand, within Echvi_0281 at 289.602 kb on + strand, within Echvi_0281 at 289.602 kb on + strand, within Echvi_0281 at 289.602 kb on + strand, within Echvi_0281 at 289.602 kb on + strand, within Echvi_0281 at 289.603 kb on - strand, within Echvi_0281 at 289.603 kb on - strand, within Echvi_0281 at 289.617 kb on - strand, within Echvi_0281 at 289.637 kb on - strand, within Echvi_0281 at 289.637 kb on - strand, within Echvi_0281 at 289.697 kb on + strand, within Echvi_0281 at 289.710 kb on + strand, within Echvi_0281 at 289.731 kb on + strand, within Echvi_0281 at 289.734 kb on + strand, within Echvi_0281 at 289.764 kb on + strand, within Echvi_0281 at 289.785 kb on + strand, within Echvi_0281 at 289.832 kb on - strand, within Echvi_0281 at 289.832 kb on - strand, within Echvi_0281 at 289.895 kb on + strand, within Echvi_0281 at 289.927 kb on + strand, within Echvi_0281 at 289.935 kb on + strand, within Echvi_0281 at 290.022 kb on + strand, within Echvi_0281 at 290.113 kb on + strand, within Echvi_0281 at 290.113 kb on + strand, within Echvi_0281 at 290.151 kb on + strand, within Echvi_0281
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 285,178 + -0.8 285,178 + +0.1 285,281 + +0.2 285,281 + -2.0 285,281 + +0.0 285,281 + +0.6 285,366 + -3.0 285,368 + +1.1 285,368 + +1.0 285,368 + +1.5 285,440 + +1.7 285,440 + -1.7 285,440 + +0.7 285,441 - -0.8 285,451 - +3.7 285,507 + -0.7 285,523 - +0.3 285,525 - -0.6 285,551 + -0.1 285,551 + -0.3 285,551 + -1.2 285,564 + -0.6 285,565 - +0.7 285,664 + +0.4 285,686 + -0.4 285,687 - +0.2 285,688 + +1.2 285,757 + -1.3 285,805 - +1.1 285,866 + -1.4 285,866 + -2.2 285,890 + -1.0 286,009 + -1.8 286,034 + -1.1 286,056 + +0.9 286,056 + -0.7 286,102 + +0.8 286,107 + +2.2 286,140 + -0.9 286,140 + +0.4 286,140 + -0.7 286,145 + +1.3 286,224 + -1.2 286,224 + +0.2 286,224 + +0.3 286,225 - +1.6 286,338 + +0.1 286,407 + Echvi_0280 0.11 -0.3 286,408 - Echvi_0280 0.11 -0.4 286,410 + Echvi_0280 0.11 +0.1 286,411 - Echvi_0280 0.11 -1.7 286,411 - Echvi_0280 0.11 -0.2 286,411 - Echvi_0280 0.11 +0.3 286,411 - Echvi_0280 0.11 +0.5 286,414 - Echvi_0280 0.11 +1.8 286,414 - Echvi_0280 0.11 +0.6 286,455 + Echvi_0280 0.12 -0.5 286,569 - Echvi_0280 0.16 +0.6 286,601 - Echvi_0280 0.17 -0.1 286,642 + Echvi_0280 0.18 +0.2 286,696 + Echvi_0280 0.20 -0.5 286,730 + Echvi_0280 0.21 +0.0 286,730 + Echvi_0280 0.21 -1.3 286,731 - Echvi_0280 0.21 +0.6 286,834 + Echvi_0280 0.24 +0.6 286,834 + Echvi_0280 0.24 +0.0 286,835 - Echvi_0280 0.24 +1.8 286,869 - Echvi_0280 0.25 -0.8 286,869 - Echvi_0280 0.25 -0.7 286,882 - Echvi_0280 0.26 -0.2 286,957 - Echvi_0280 0.28 +2.0 286,958 + Echvi_0280 0.28 +0.2 286,959 - Echvi_0280 0.28 +1.9 286,960 + Echvi_0280 0.28 +0.7 286,961 - Echvi_0280 0.28 +0.4 286,961 - Echvi_0280 0.28 +0.7 286,996 + Echvi_0280 0.29 -0.2 286,997 - Echvi_0280 0.29 +0.6 287,104 + Echvi_0280 0.33 +0.1 287,104 + Echvi_0280 0.33 +1.3 287,141 + Echvi_0280 0.34 +0.9 287,141 + Echvi_0280 0.34 -0.6 287,142 - Echvi_0280 0.34 -0.4 287,177 + Echvi_0280 0.35 -1.5 287,177 + Echvi_0280 0.35 -0.6 287,178 - Echvi_0280 0.35 +0.2 287,210 + Echvi_0280 0.36 +0.4 287,210 + Echvi_0280 0.36 +0.5 287,211 - Echvi_0280 0.36 -0.2 287,211 - Echvi_0280 0.36 -0.2 287,394 + Echvi_0280 0.42 -0.2 287,394 + Echvi_0280 0.42 -0.1 287,394 + Echvi_0280 0.42 -0.9 287,394 + Echvi_0280 0.42 -1.3 287,462 + Echvi_0280 0.44 -0.2 287,505 + Echvi_0280 0.45 +2.8 287,505 + Echvi_0280 0.45 -0.6 287,560 + Echvi_0280 0.47 -2.3 287,750 - Echvi_0280 0.53 +0.4 287,759 - Echvi_0280 0.53 -0.2 287,819 + Echvi_0280 0.55 -0.3 287,819 + Echvi_0280 0.55 -0.6 287,819 + Echvi_0280 0.55 -0.3 287,820 - Echvi_0280 0.55 +2.8 287,820 - Echvi_0280 0.55 +1.2 287,822 + Echvi_0280 0.55 -0.6 287,822 + Echvi_0280 0.55 -1.5 287,822 + Echvi_0280 0.55 +1.1 287,891 + Echvi_0280 0.57 -0.0 287,891 + Echvi_0280 0.57 +1.2 287,891 + Echvi_0280 0.57 +0.4 287,913 - Echvi_0280 0.58 +0.2 287,932 + Echvi_0280 0.59 +0.9 287,936 + Echvi_0280 0.59 -1.1 287,972 + Echvi_0280 0.60 -0.5 287,972 + Echvi_0280 0.60 -0.3 287,972 + Echvi_0280 0.60 +0.1 287,972 + Echvi_0280 0.60 +0.1 287,973 - Echvi_0280 0.60 -1.6 287,973 - Echvi_0280 0.60 -0.0 287,984 + Echvi_0280 0.60 +0.1 287,984 + Echvi_0280 0.60 +0.4 288,064 + Echvi_0280 0.63 +0.8 288,064 + Echvi_0280 0.63 -0.2 288,106 + Echvi_0280 0.64 -0.8 288,107 - Echvi_0280 0.64 +0.3 288,150 + Echvi_0280 0.65 +0.0 288,150 + Echvi_0280 0.65 -0.9 288,154 - Echvi_0280 0.66 +0.6 288,154 - Echvi_0280 0.66 -0.9 288,162 - Echvi_0280 0.66 +1.9 288,162 - Echvi_0280 0.66 +1.8 288,180 - Echvi_0280 0.66 +1.8 288,180 - Echvi_0280 0.66 -1.8 288,191 - Echvi_0280 0.67 -0.9 288,191 - Echvi_0280 0.67 +0.1 288,191 - Echvi_0280 0.67 +1.3 288,191 - Echvi_0280 0.67 -0.2 288,194 + Echvi_0280 0.67 -0.1 288,248 - Echvi_0280 0.69 -0.3 288,307 - Echvi_0280 0.70 -0.2 288,341 + Echvi_0280 0.71 -1.3 288,494 + Echvi_0280 0.76 -0.6 288,495 - Echvi_0280 0.76 -1.0 288,495 - Echvi_0280 0.76 -2.1 288,495 - Echvi_0280 0.76 +0.4 288,495 - Echvi_0280 0.76 +1.1 288,496 + Echvi_0280 0.76 -0.4 288,508 - Echvi_0280 0.77 +1.8 288,518 + Echvi_0280 0.77 +1.1 288,618 - Echvi_0280 0.80 +0.4 288,710 + Echvi_0280 0.83 +0.6 288,711 - Echvi_0280 0.83 -0.2 288,844 - Echvi_0280 0.87 -1.7 288,844 - Echvi_0280 0.87 +0.7 288,869 + Echvi_0280 0.88 -2.2 288,989 + +0.1 288,989 + -0.6 288,990 - +0.3 289,010 + +1.7 289,031 + -1.8 289,032 - +0.4 289,161 + -0.2 289,162 - +2.0 289,215 + -0.5 289,215 + +0.0 289,216 - -1.3 289,231 - -0.1 289,244 + -0.5 289,251 + -0.3 289,284 - +0.7 289,290 + -0.4 289,290 + +1.2 289,291 - -1.2 289,322 - -0.4 289,334 + +0.2 289,335 - -0.3 289,387 + -2.0 289,387 + +0.4 289,388 - +0.7 289,388 - -0.3 289,388 - +0.4 289,388 - -0.4 289,432 - +0.9 289,526 + Echvi_0281 0.14 -1.7 289,526 + Echvi_0281 0.14 +0.3 289,530 - Echvi_0281 0.14 +1.4 289,592 + Echvi_0281 0.17 +0.3 289,593 - Echvi_0281 0.18 -0.4 289,593 - Echvi_0281 0.18 +0.9 289,593 - Echvi_0281 0.18 -1.6 289,593 - Echvi_0281 0.18 +0.7 289,593 - Echvi_0281 0.18 -3.0 289,593 - Echvi_0281 0.18 -0.2 289,596 + Echvi_0281 0.18 -0.5 289,596 + Echvi_0281 0.18 +0.1 289,597 - Echvi_0281 0.18 +0.1 289,597 - Echvi_0281 0.18 +0.1 289,597 - Echvi_0281 0.18 -1.2 289,597 - Echvi_0281 0.18 -0.3 289,597 - Echvi_0281 0.18 -0.3 289,597 - Echvi_0281 0.18 -0.6 289,602 + Echvi_0281 0.18 +1.2 289,602 + Echvi_0281 0.18 +0.9 289,602 + Echvi_0281 0.18 +0.9 289,602 + Echvi_0281 0.18 +1.4 289,603 - Echvi_0281 0.18 +0.3 289,603 - Echvi_0281 0.18 +0.1 289,617 - Echvi_0281 0.19 +0.2 289,637 - Echvi_0281 0.20 +2.6 289,637 - Echvi_0281 0.20 +0.1 289,697 + Echvi_0281 0.23 +0.4 289,710 + Echvi_0281 0.24 +0.7 289,731 + Echvi_0281 0.25 +0.4 289,734 + Echvi_0281 0.25 +2.3 289,764 + Echvi_0281 0.27 -1.2 289,785 + Echvi_0281 0.28 +0.1 289,832 - Echvi_0281 0.30 -1.0 289,832 - Echvi_0281 0.30 +0.7 289,895 + Echvi_0281 0.34 -0.1 289,927 + Echvi_0281 0.35 -0.3 289,935 + Echvi_0281 0.36 -1.3 290,022 + Echvi_0281 0.41 +1.0 290,113 + Echvi_0281 0.45 -0.4 290,113 + Echvi_0281 0.45 +1.4 290,151 + Echvi_0281 0.48 -2.1
Or see this region's nucleotide sequence