Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0112

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
105,860	+				-0.4
105,860	+				+0.1
105,885	+				+1.3
105,885	+				-0.7
105,885	+				-1.6
105,905	+				+0.7
105,905	+				+0.1
105,906	-				-1.0
105,924	-				+0.2
106,054	-		Echvi_0111	0.28	+0.7
106,174	-		Echvi_0111	0.49	-0.2
106,223	-		Echvi_0111	0.57	+1.4
106,242	+		Echvi_0111	0.60	-0.6
106,325	-		Echvi_0111	0.75	+0.6
106,325	-		Echvi_0111	0.75	-0.7
106,345	-		Echvi_0111	0.78	-0.7
106,378	+		Echvi_0111	0.84	-0.2
106,378	+		Echvi_0111	0.84	+0.6
106,382	+		Echvi_0111	0.84	-0.4
106,382	+		Echvi_0111	0.84	-0.4
106,382	+		Echvi_0111	0.84	-0.0
106,383	-		Echvi_0111	0.84	+0.3
106,383	-		Echvi_0111	0.84	-0.4
106,383	-		Echvi_0111	0.84	-0.4
106,404	-		Echvi_0111	0.88	-0.6
106,455	+				+0.2
106,532	+				-1.1
106,532	+				-1.0
106,577	+		Echvi_0112	0.13	+0.1
106,592	-		Echvi_0112	0.15	+0.8
106,649	+		Echvi_0112	0.21	+0.4
106,650	-		Echvi_0112	0.22	-0.6
106,650	-		Echvi_0112	0.22	-0.8
106,663	+		Echvi_0112	0.23	-0.3
106,678	+		Echvi_0112	0.25	-0.1
106,678	+		Echvi_0112	0.25	-0.6
106,679	-		Echvi_0112	0.25	-0.7
106,681	+		Echvi_0112	0.25	-0.9
106,690	+		Echvi_0112	0.26	+1.7
106,693	+		Echvi_0112	0.27	-1.4
106,719	+		Echvi_0112	0.30	-0.6
106,720	-		Echvi_0112	0.30	-0.7
106,734	-		Echvi_0112	0.31	+2.0
106,734	-		Echvi_0112	0.31	-1.8
106,755	+		Echvi_0112	0.34	-0.2
106,907	+		Echvi_0112	0.52	-1.2
106,907	+		Echvi_0112	0.52	-0.5
106,908	-		Echvi_0112	0.52	+0.2
106,908	-		Echvi_0112	0.52	-1.5
106,908	-		Echvi_0112	0.52	-0.8
106,910	+		Echvi_0112	0.52	-0.2
106,910	+		Echvi_0112	0.52	-0.9
106,911	-		Echvi_0112	0.52	-2.2
106,911	-		Echvi_0112	0.52	-0.5
106,938	+		Echvi_0112	0.55	+0.2
106,939	-		Echvi_0112	0.56	-1.1
106,981	-		Echvi_0112	0.60	-1.5
107,034	+		Echvi_0112	0.67	-0.1
107,035	-		Echvi_0112	0.67	+0.7
107,035	-		Echvi_0112	0.67	+0.7
107,035	-		Echvi_0112	0.67	+0.1
107,035	-		Echvi_0112	0.67	+0.0
107,038	+		Echvi_0112	0.67	-1.7
107,157	-		Echvi_0112	0.81	-1.0
107,167	+		Echvi_0112	0.82	-1.3
107,168	-		Echvi_0112	0.82	-1.0
107,332	+				+0.2
107,333	-				+2.3
107,333	-				+2.2
107,333	-				+0.2
107,367	+				-0.3
107,375	+				-1.3
107,376	-				+0.7
107,376	-				+0.3
107,376	-				+0.5
107,376	-				-0.3
107,377	+				-0.8
107,413	+				-2.3
107,531	+				-0.7
107,532	-				-0.7
107,552	+				+1.1
107,553	-				+0.5
107,563	-		Echvi_0113	0.10	-1.4
107,720	+		Echvi_0113	0.20	+1.0
107,741	+		Echvi_0113	0.21	-0.5
107,742	-		Echvi_0113	0.21	-2.9
107,756	+		Echvi_0113	0.22	-1.2
107,813	-		Echvi_0113	0.26	-1.0
107,868	+		Echvi_0113	0.29	-1.1
107,893	+		Echvi_0113	0.31	+0.5
107,894	-		Echvi_0113	0.31	-0.1
107,928	+		Echvi_0113	0.33	-1.0
107,928	+		Echvi_0113	0.33	-0.9
107,960	+		Echvi_0113	0.35	+1.7
108,046	+		Echvi_0113	0.40	-0.7
108,147	-		Echvi_0113	0.46	+0.3
108,147	-		Echvi_0113	0.46	+0.3
108,302	+		Echvi_0113	0.56	-0.2
108,302	+		Echvi_0113	0.56	+0.7
108,302	+		Echvi_0113	0.56	-1.4
108,303	-		Echvi_0113	0.56	+0.7
108,306	+		Echvi_0113	0.56	-0.1
108,306	+		Echvi_0113	0.56	+0.5
108,307	-		Echvi_0113	0.56	-0.8