Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0080

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
80,219	-				-0.1
80,225	+				+0.2
80,225	+				-1.0
80,244	+				-0.6
80,245	-				-0.6
80,263	-				-2.3
80,278	+				+0.3
80,278	+				+0.2
80,282	+				+1.7
80,342	+				-1.3
80,342	+				+2.7
80,343	-				-0.3
80,383	+				-0.2
80,384	-				+0.3
80,384	-				-0.1
80,474	-				+0.9
80,531	+				+0.3
80,672	+				-0.3
80,673	-				+0.2
80,721	-		Echvi_0079	0.51	+0.4
80,798	-				-0.3
80,838	+				+0.6
80,839	-				-1.0
80,961	-				-2.2
81,057	+				-0.9
81,057	+				-0.3
81,197	+		Echvi_0080	0.21	-0.3
81,197	+		Echvi_0080	0.21	-0.9
81,197	+		Echvi_0080	0.21	-1.8
81,198	-		Echvi_0080	0.21	-1.3
81,198	-		Echvi_0080	0.21	+0.1
81,198	-		Echvi_0080	0.21	-0.8
81,269	-		Echvi_0080	0.27	-1.6
81,306	-		Echvi_0080	0.31	-0.1
81,385	+		Echvi_0080	0.38	-1.1
81,427	+		Echvi_0080	0.42	+1.7
81,427	+		Echvi_0080	0.42	-2.6
81,427	+		Echvi_0080	0.42	-0.9
81,428	-		Echvi_0080	0.42	+0.1
81,431	+		Echvi_0080	0.43	-1.4
81,434	-		Echvi_0080	0.43	-2.3
81,434	-		Echvi_0080	0.43	+0.7
81,539	+		Echvi_0080	0.53	-0.6
81,539	+		Echvi_0080	0.53	+1.7
81,540	-		Echvi_0080	0.53	-2.2
81,546	-		Echvi_0080	0.53	+0.7
81,552	+		Echvi_0080	0.54	-0.1
81,553	-		Echvi_0080	0.54	-0.9
81,554	+		Echvi_0080	0.54	-3.1
81,554	+		Echvi_0080	0.54	+0.7
81,555	-		Echvi_0080	0.54	-2.4
81,600	+		Echvi_0080	0.58	-2.2
81,737	+		Echvi_0080	0.71	-1.3
81,737	+		Echvi_0080	0.71	-1.1
81,737	+		Echvi_0080	0.71	-1.3
81,738	-		Echvi_0080	0.71	-1.9
81,738	-		Echvi_0080	0.71	-0.9
81,756	+		Echvi_0080	0.73	-3.1
81,769	+		Echvi_0080	0.74	+0.2
81,770	-		Echvi_0080	0.74	+0.7
81,770	-		Echvi_0080	0.74	-2.8
81,770	-		Echvi_0080	0.74	-0.4
81,770	-		Echvi_0080	0.74	-1.5
81,787	+		Echvi_0080	0.76	-0.3
81,787	+		Echvi_0080	0.76	-2.0
81,789	+		Echvi_0080	0.76	-1.6
81,789	+		Echvi_0080	0.76	-0.2
81,789	+		Echvi_0080	0.76	-1.1
81,789	+		Echvi_0080	0.76	-1.4
81,789	+		Echvi_0080	0.76	-1.4
81,789	+		Echvi_0080	0.76	-1.7
81,790	-		Echvi_0080	0.76	+0.2
81,790	-		Echvi_0080	0.76	-0.9
81,790	-		Echvi_0080	0.76	-0.7
81,790	-		Echvi_0080	0.76	-0.4
81,790	-		Echvi_0080	0.76	+0.4
81,790	-		Echvi_0080	0.76	+0.4
81,790	-		Echvi_0080	0.76	-0.6
81,790	-		Echvi_0080	0.76	-1.0
81,794	+		Echvi_0080	0.76	-0.1
81,794	+		Echvi_0080	0.76	-1.4
81,794	+		Echvi_0080	0.76	-0.6
81,796	+		Echvi_0080	0.76	-2.3
81,796	+		Echvi_0080	0.76	+0.6
81,796	+		Echvi_0080	0.76	-2.3
81,797	-		Echvi_0080	0.77	-0.3
81,836	+		Echvi_0080	0.80	-1.3
81,836	+		Echvi_0080	0.80	-1.0
81,837	-		Echvi_0080	0.80	-2.6
81,876	-		Echvi_0080	0.84	-0.5
81,909	+		Echvi_0080	0.87	-0.6
81,952	+				+2.7
81,952	+				-1.7
81,953	-				-2.2
81,979	+				-1.7
81,979	+				-2.1
81,979	+				+0.4
81,979	+				-0.8
81,980	-				-1.2
81,980	-				-1.1
81,980	-				+0.4
81,980	-				+2.1
81,980	-				-0.3
81,980	-				-1.3
81,980	-				-0.5
81,980	-				-2.1
82,023	-				-1.3
82,026	+				-0.4
82,088	-				+0.9
82,114	+				+1.3
82,114	+				-1.0
82,114	+				+1.6
82,114	+				-0.8
82,145	+		Echvi_0081	0.13	-0.3
82,146	-		Echvi_0081	0.13	+0.6
82,156	+		Echvi_0081	0.14	+0.0
82,156	+		Echvi_0081	0.14	-0.6
82,159	-		Echvi_0081	0.15	-1.0
82,203	+		Echvi_0081	0.20	-1.0
82,203	+		Echvi_0081	0.20	+0.9
82,226	+		Echvi_0081	0.23	-0.1
82,226	+		Echvi_0081	0.23	+0.2
82,282	+		Echvi_0081	0.30	-1.8
82,295	+		Echvi_0081	0.32	-0.7
82,295	+		Echvi_0081	0.32	-2.0
82,526	+		Echvi_0081	0.62	-0.1
82,526	+				-0.3
82,527	-		Echvi_0081	0.62	-1.1
82,590	+		Echvi_0081	0.70	+1.7
82,590	+		Echvi_0081	0.70	+0.2
82,590	+		Echvi_0081	0.70	-1.3
82,647	-		Echvi_0081	0.77	-0.4
82,707	-		Echvi_0081	0.85	-1.0
82,720	-		Echvi_0081	0.87	-0.3
82,791	+				-1.2
82,792	-				+0.9
82,792	-				-0.8
82,793	+				+0.7
82,793	+				-0.8
82,794	-				-0.1
82,794	-				+1.7
82,795	+				-0.8
82,795	+				-0.6
82,795	+				-0.8
82,796	-				-1.6
82,814	-				-0.8
82,826	+				+0.0
82,826	+				+1.1
82,826	+				-1.6
82,826	+				-0.1
82,827	-				+0.2
82,827	-				+0.4
82,868	+				-1.1
82,874	-				+0.7
82,894	+				+0.2
82,894	+				+0.2
83,025	+		Echvi_0082	0.18	-0.3
83,038	+		Echvi_0082	0.20	+0.2