Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0001

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
60	+				+1.0
61	-				-0.3
81	-				-0.4
117	+				+1.5
118	-				+0.3
135	-				+0.3
285	+				-2.2
285	+				-2.6
285	+				-1.3
1,712	+				-0.1
1,713	-				-2.4
1,723	-				-0.4
1,765	-				+1.0
1,818	+		Echvi_0002	0.11	+2.1
1,818	+		Echvi_0002	0.11	+0.2
1,818	+		Echvi_0002	0.11	+2.1
1,819	-		Echvi_0002	0.11	-1.0
1,821	+		Echvi_0002	0.11	-1.3
1,822	-		Echvi_0002	0.12	-2.3
1,824	-		Echvi_0002	0.12	-0.4
1,824	-		Echvi_0002	0.12	-0.2
2,091	+		Echvi_0002	0.46	-1.6
2,092	-		Echvi_0002	0.46	-0.9
2,268	-		Echvi_0002	0.69	-0.6
2,328	+		Echvi_0002	0.77	-0.5
2,329	-		Echvi_0002	0.77	-2.0
2,330	+		Echvi_0002	0.77	+0.9
2,330	+		Echvi_0002	0.77	+1.6
2,331	-		Echvi_0002	0.77	-2.7
2,342	+		Echvi_0002	0.79	-0.4
2,344	+		Echvi_0002	0.79	-0.4
2,344	+		Echvi_0002	0.79	-0.6
2,345	-		Echvi_0002	0.79	-1.3
2,345	-		Echvi_0002	0.79	-1.7
2,353	+		Echvi_0002	0.80	-0.8
2,367	+		Echvi_0002	0.82	+0.6
2,368	-		Echvi_0002	0.82	+0.3
2,370	+		Echvi_0002	0.82	-1.1
2,370	+		Echvi_0002	0.82	+0.3
2,405	-		Echvi_0002	0.87	-1.2
2,457	+				-1.8
2,485	+				-1.1
2,486	-				+0.7
2,487	+				+0.2
2,508	+				-0.7
2,509	-				-0.3
2,509	-				+1.0
2,512	+				-1.3
2,512	+				-1.3
2,512	+				-0.6
2,544	+				-2.1
2,544	+				+0.0
2,545	-				-0.9
2,545	-				-1.5
2,678	+		Echvi_0003	0.16	+1.7