Experiment: D-Mannose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS22035 and ABID97_RS22040 are separated by 148 nucleotides ABID97_RS22040 and ABID97_RS22045 are separated by 82 nucleotides
ABID97_RS22035: ABID97_RS22035 - neutral zinc metallopeptidase, at 4,558,687 to 4,559,562
_RS22035
ABID97_RS22040: ABID97_RS22040 - dCTP deaminase, at 4,559,711 to 4,560,277
_RS22040
ABID97_RS22045: ABID97_RS22045 - guanine deaminase, at 4,560,360 to 4,561,646
_RS22045
Position (kb) 4559
4560
4561 Strain fitness (log2 ratio) -1
0
1
2 at 4559.120 kb on + strand, within ABID97_RS22035 at 4559.120 kb on + strand, within ABID97_RS22035 at 4559.121 kb on - strand, within ABID97_RS22035 at 4559.121 kb on - strand, within ABID97_RS22035 at 4559.163 kb on - strand, within ABID97_RS22035 at 4559.244 kb on - strand, within ABID97_RS22035 at 4559.244 kb on - strand, within ABID97_RS22035 at 4559.244 kb on - strand, within ABID97_RS22035 at 4559.613 kb on + strand at 4559.613 kb on + strand at 4559.614 kb on - strand at 4559.614 kb on - strand at 4559.614 kb on - strand at 4559.637 kb on + strand at 4560.278 kb on - strand at 4560.643 kb on + strand, within ABID97_RS22045 at 4560.643 kb on + strand, within ABID97_RS22045 at 4560.643 kb on + strand, within ABID97_RS22045 at 4560.644 kb on - strand, within ABID97_RS22045 at 4560.644 kb on - strand, within ABID97_RS22045 at 4560.719 kb on - strand, within ABID97_RS22045 at 4560.841 kb on + strand, within ABID97_RS22045 at 4560.841 kb on + strand, within ABID97_RS22045 at 4560.841 kb on + strand, within ABID97_RS22045 at 4560.856 kb on + strand, within ABID97_RS22045 at 4560.856 kb on + strand, within ABID97_RS22045 at 4560.892 kb on + strand, within ABID97_RS22045 at 4560.892 kb on + strand, within ABID97_RS22045 at 4560.893 kb on - strand, within ABID97_RS22045 at 4560.893 kb on - strand, within ABID97_RS22045 at 4560.893 kb on - strand, within ABID97_RS22045 at 4560.904 kb on + strand, within ABID97_RS22045 at 4560.905 kb on - strand, within ABID97_RS22045 at 4560.922 kb on + strand, within ABID97_RS22045 at 4560.991 kb on + strand, within ABID97_RS22045 at 4560.992 kb on - strand, within ABID97_RS22045 at 4561.066 kb on + strand, within ABID97_RS22045
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannose (C) remove 4,559,120 + ABID97_RS22035 0.49 -0.2 4,559,120 + ABID97_RS22035 0.49 +0.1 4,559,121 - ABID97_RS22035 0.50 +2.6 4,559,121 - ABID97_RS22035 0.50 -0.5 4,559,163 - ABID97_RS22035 0.54 +0.2 4,559,244 - ABID97_RS22035 0.64 -0.0 4,559,244 - ABID97_RS22035 0.64 -0.6 4,559,244 - ABID97_RS22035 0.64 -0.2 4,559,613 + -0.3 4,559,613 + -0.4 4,559,614 - +0.2 4,559,614 - -0.1 4,559,614 - -0.0 4,559,637 + +0.2 4,560,278 - +0.9 4,560,643 + ABID97_RS22045 0.22 -0.5 4,560,643 + ABID97_RS22045 0.22 +0.0 4,560,643 + ABID97_RS22045 0.22 +0.3 4,560,644 - ABID97_RS22045 0.22 +0.6 4,560,644 - ABID97_RS22045 0.22 +0.2 4,560,719 - ABID97_RS22045 0.28 -0.2 4,560,841 + ABID97_RS22045 0.37 -0.1 4,560,841 + ABID97_RS22045 0.37 -0.4 4,560,841 + ABID97_RS22045 0.37 -0.3 4,560,856 + ABID97_RS22045 0.39 +0.1 4,560,856 + ABID97_RS22045 0.39 -0.1 4,560,892 + ABID97_RS22045 0.41 +0.1 4,560,892 + ABID97_RS22045 0.41 -1.0 4,560,893 - ABID97_RS22045 0.41 -0.1 4,560,893 - ABID97_RS22045 0.41 -0.0 4,560,893 - ABID97_RS22045 0.41 -0.6 4,560,904 + ABID97_RS22045 0.42 -0.6 4,560,905 - ABID97_RS22045 0.42 -0.3 4,560,922 + ABID97_RS22045 0.44 +0.5 4,560,991 + ABID97_RS22045 0.49 -0.6 4,560,992 - ABID97_RS22045 0.49 -1.1 4,561,066 + ABID97_RS22045 0.55 -1.0
Or see this region's nucleotide sequence