Experiment: D-Mannose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS22020 and ABID97_RS22025 are separated by 115 nucleotides ABID97_RS22025 and ABID97_RS22030 are separated by 12 nucleotides ABID97_RS22030 and ABID97_RS22035 are separated by 131 nucleotides
ABID97_RS22020: ABID97_RS22020 - rhodanese-related sulfurtransferase, at 4,555,111 to 4,556,739
_RS22020
ABID97_RS22025: ABID97_RS22025 - hypothetical protein, at 4,556,855 to 4,557,076
_RS22025
ABID97_RS22030: ABID97_RS22030 - DEAD/DEAH box helicase, at 4,557,089 to 4,558,555
_RS22030
ABID97_RS22035: ABID97_RS22035 - neutral zinc metallopeptidase, at 4,558,687 to 4,559,562
_RS22035
Position (kb) 4557
4558
4559 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4556.170 kb on + strand, within ABID97_RS22020 at 4556.170 kb on + strand, within ABID97_RS22020 at 4556.170 kb on + strand, within ABID97_RS22020 at 4556.170 kb on + strand, within ABID97_RS22020 at 4556.170 kb on + strand, within ABID97_RS22020 at 4556.170 kb on + strand, within ABID97_RS22020 at 4556.170 kb on + strand, within ABID97_RS22020 at 4556.170 kb on + strand, within ABID97_RS22020 at 4556.170 kb on + strand, within ABID97_RS22020 at 4556.170 kb on + strand, within ABID97_RS22020 at 4556.171 kb on - strand, within ABID97_RS22020 at 4556.171 kb on - strand, within ABID97_RS22020 at 4556.171 kb on - strand, within ABID97_RS22020 at 4556.171 kb on - strand, within ABID97_RS22020 at 4556.171 kb on - strand, within ABID97_RS22020 at 4556.171 kb on - strand, within ABID97_RS22020 at 4556.171 kb on - strand, within ABID97_RS22020 at 4556.171 kb on - strand, within ABID97_RS22020 at 4556.339 kb on - strand, within ABID97_RS22020 at 4556.369 kb on - strand, within ABID97_RS22020 at 4556.369 kb on - strand, within ABID97_RS22020 at 4556.465 kb on - strand, within ABID97_RS22020 at 4556.668 kb on + strand at 4556.668 kb on + strand at 4556.668 kb on + strand at 4556.668 kb on + strand at 4556.684 kb on - strand at 4556.684 kb on - strand at 4556.770 kb on + strand at 4556.771 kb on - strand at 4556.826 kb on + strand at 4556.827 kb on - strand at 4556.869 kb on - strand at 4556.939 kb on + strand, within ABID97_RS22025 at 4556.963 kb on + strand, within ABID97_RS22025 at 4556.963 kb on + strand, within ABID97_RS22025 at 4556.963 kb on + strand, within ABID97_RS22025 at 4556.963 kb on + strand, within ABID97_RS22025 at 4556.964 kb on - strand, within ABID97_RS22025 at 4556.964 kb on - strand, within ABID97_RS22025 at 4556.978 kb on + strand, within ABID97_RS22025 at 4556.979 kb on - strand, within ABID97_RS22025 at 4556.979 kb on - strand, within ABID97_RS22025 at 4557.011 kb on + strand, within ABID97_RS22025 at 4557.558 kb on + strand, within ABID97_RS22030 at 4557.558 kb on + strand, within ABID97_RS22030 at 4557.942 kb on + strand, within ABID97_RS22030 at 4557.943 kb on - strand, within ABID97_RS22030 at 4557.943 kb on - strand, within ABID97_RS22030 at 4557.943 kb on - strand, within ABID97_RS22030 at 4558.089 kb on + strand, within ABID97_RS22030 at 4558.089 kb on + strand, within ABID97_RS22030 at 4558.090 kb on - strand, within ABID97_RS22030 at 4558.090 kb on - strand, within ABID97_RS22030 at 4558.090 kb on - strand, within ABID97_RS22030 at 4558.090 kb on - strand, within ABID97_RS22030 at 4558.243 kb on - strand, within ABID97_RS22030 at 4558.243 kb on - strand, within ABID97_RS22030 at 4558.532 kb on + strand at 4558.533 kb on - strand at 4558.556 kb on + strand at 4558.556 kb on + strand at 4558.565 kb on + strand at 4558.565 kb on + strand at 4558.566 kb on - strand at 4558.566 kb on - strand at 4558.566 kb on - strand at 4558.636 kb on + strand at 4559.120 kb on + strand, within ABID97_RS22035 at 4559.120 kb on + strand, within ABID97_RS22035 at 4559.121 kb on - strand, within ABID97_RS22035 at 4559.121 kb on - strand, within ABID97_RS22035 at 4559.163 kb on - strand, within ABID97_RS22035 at 4559.244 kb on - strand, within ABID97_RS22035 at 4559.244 kb on - strand, within ABID97_RS22035 at 4559.244 kb on - strand, within ABID97_RS22035
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannose (C) remove 4,556,170 + ABID97_RS22020 0.65 +0.1 4,556,170 + ABID97_RS22020 0.65 -0.2 4,556,170 + ABID97_RS22020 0.65 -0.1 4,556,170 + ABID97_RS22020 0.65 -0.2 4,556,170 + ABID97_RS22020 0.65 -1.9 4,556,170 + ABID97_RS22020 0.65 +0.1 4,556,170 + ABID97_RS22020 0.65 -0.2 4,556,170 + ABID97_RS22020 0.65 -0.3 4,556,170 + ABID97_RS22020 0.65 +1.1 4,556,170 + ABID97_RS22020 0.65 +0.6 4,556,171 - ABID97_RS22020 0.65 +0.0 4,556,171 - ABID97_RS22020 0.65 -1.2 4,556,171 - ABID97_RS22020 0.65 -0.1 4,556,171 - ABID97_RS22020 0.65 +0.5 4,556,171 - ABID97_RS22020 0.65 -0.1 4,556,171 - ABID97_RS22020 0.65 +1.2 4,556,171 - ABID97_RS22020 0.65 -0.1 4,556,171 - ABID97_RS22020 0.65 +0.0 4,556,339 - ABID97_RS22020 0.75 -0.3 4,556,369 - ABID97_RS22020 0.77 +1.1 4,556,369 - ABID97_RS22020 0.77 +0.3 4,556,465 - ABID97_RS22020 0.83 +0.4 4,556,668 + -1.3 4,556,668 + -0.2 4,556,668 + +0.1 4,556,668 + +0.5 4,556,684 - +0.5 4,556,684 - -1.1 4,556,770 + +0.3 4,556,771 - +0.3 4,556,826 + -0.1 4,556,827 - -0.0 4,556,869 - -0.0 4,556,939 + ABID97_RS22025 0.38 +0.2 4,556,963 + ABID97_RS22025 0.49 -0.2 4,556,963 + ABID97_RS22025 0.49 -0.2 4,556,963 + ABID97_RS22025 0.49 -0.3 4,556,963 + ABID97_RS22025 0.49 -0.5 4,556,964 - ABID97_RS22025 0.49 -0.4 4,556,964 - ABID97_RS22025 0.49 +0.8 4,556,978 + ABID97_RS22025 0.55 -0.3 4,556,979 - ABID97_RS22025 0.56 -0.1 4,556,979 - ABID97_RS22025 0.56 +0.2 4,557,011 + ABID97_RS22025 0.70 -0.2 4,557,558 + ABID97_RS22030 0.32 +0.4 4,557,558 + ABID97_RS22030 0.32 -0.6 4,557,942 + ABID97_RS22030 0.58 -1.9 4,557,943 - ABID97_RS22030 0.58 -2.7 4,557,943 - ABID97_RS22030 0.58 -0.4 4,557,943 - ABID97_RS22030 0.58 +0.4 4,558,089 + ABID97_RS22030 0.68 +1.1 4,558,089 + ABID97_RS22030 0.68 -0.2 4,558,090 - ABID97_RS22030 0.68 -0.6 4,558,090 - ABID97_RS22030 0.68 -0.9 4,558,090 - ABID97_RS22030 0.68 -0.5 4,558,090 - ABID97_RS22030 0.68 -0.4 4,558,243 - ABID97_RS22030 0.79 -0.1 4,558,243 - ABID97_RS22030 0.79 -0.5 4,558,532 + +0.2 4,558,533 - -0.2 4,558,556 + -0.2 4,558,556 + +0.7 4,558,565 + +0.5 4,558,565 + +0.4 4,558,566 - -0.1 4,558,566 - -1.3 4,558,566 - -0.1 4,558,636 + +0.5 4,559,120 + ABID97_RS22035 0.49 -0.2 4,559,120 + ABID97_RS22035 0.49 +0.1 4,559,121 - ABID97_RS22035 0.50 +2.6 4,559,121 - ABID97_RS22035 0.50 -0.5 4,559,163 - ABID97_RS22035 0.54 +0.2 4,559,244 - ABID97_RS22035 0.64 -0.0 4,559,244 - ABID97_RS22035 0.64 -0.6 4,559,244 - ABID97_RS22035 0.64 -0.2
Or see this region's nucleotide sequence