Experiment: D-Mannose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS15785 and ABID97_RS15790 are separated by 115 nucleotides ABID97_RS15790 and ABID97_RS15795 are separated by 100 nucleotides
ABID97_RS15785: ABID97_RS15785 - glutathione S-transferase family protein, at 3,270,703 to 3,271,641
_RS15785
ABID97_RS15790: ABID97_RS15790 - SDR family oxidoreductase, at 3,271,757 to 3,272,662
_RS15790
ABID97_RS15795: ABID97_RS15795 - LysR substrate-binding domain-containing protein, at 3,272,763 to 3,273,767
_RS15795
Position (kb) 3271
3272
3273 Strain fitness (log2 ratio) -1
0
1 at 3270.889 kb on + strand, within ABID97_RS15785 at 3270.889 kb on + strand, within ABID97_RS15785 at 3270.889 kb on + strand, within ABID97_RS15785 at 3270.889 kb on + strand, within ABID97_RS15785 at 3270.889 kb on + strand, within ABID97_RS15785 at 3270.889 kb on + strand, within ABID97_RS15785 at 3270.889 kb on + strand, within ABID97_RS15785 at 3270.890 kb on - strand, within ABID97_RS15785 at 3270.890 kb on - strand, within ABID97_RS15785 at 3270.890 kb on - strand, within ABID97_RS15785 at 3270.890 kb on - strand, within ABID97_RS15785 at 3271.175 kb on - strand, within ABID97_RS15785 at 3271.615 kb on + strand at 3272.240 kb on + strand, within ABID97_RS15790 at 3272.240 kb on + strand, within ABID97_RS15790 at 3272.339 kb on + strand, within ABID97_RS15790 at 3272.523 kb on - strand, within ABID97_RS15790 at 3272.523 kb on - strand, within ABID97_RS15790 at 3272.523 kb on - strand, within ABID97_RS15790 at 3272.523 kb on - strand, within ABID97_RS15790 at 3273.247 kb on + strand, within ABID97_RS15795
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannose (C) remove 3,270,889 + ABID97_RS15785 0.20 -0.7 3,270,889 + ABID97_RS15785 0.20 +0.5 3,270,889 + ABID97_RS15785 0.20 +0.7 3,270,889 + ABID97_RS15785 0.20 +0.2 3,270,889 + ABID97_RS15785 0.20 +0.4 3,270,889 + ABID97_RS15785 0.20 -0.0 3,270,889 + ABID97_RS15785 0.20 -0.7 3,270,890 - ABID97_RS15785 0.20 -0.1 3,270,890 - ABID97_RS15785 0.20 +0.0 3,270,890 - ABID97_RS15785 0.20 +0.2 3,270,890 - ABID97_RS15785 0.20 -0.5 3,271,175 - ABID97_RS15785 0.50 +0.6 3,271,615 + +0.6 3,272,240 + ABID97_RS15790 0.53 +0.7 3,272,240 + ABID97_RS15790 0.53 -0.4 3,272,339 + ABID97_RS15790 0.64 +0.0 3,272,523 - ABID97_RS15790 0.85 +0.1 3,272,523 - ABID97_RS15790 0.85 +0.7 3,272,523 - ABID97_RS15790 0.85 -0.3 3,272,523 - ABID97_RS15790 0.85 -0.0 3,273,247 + ABID97_RS15795 0.48 +0.0
Or see this region's nucleotide sequence