Experiment: D-Mannose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS04665 and ABID97_RS04670 are separated by 4 nucleotides ABID97_RS04670 and ABID97_RS04675 overlap by 1 nucleotides
ABID97_RS04665: ABID97_RS04665 - acyl-CoA dehydrogenase family protein, at 972,847 to 974,010
_RS04665
ABID97_RS04670: ABID97_RS04670 - enoyl-CoA hydratase-related protein, at 974,015 to 974,818
_RS04670
ABID97_RS04675: ABID97_RS04675 - acetyl-CoA C-acetyltransferase, at 974,818 to 975,996
_RS04675
Position (kb) 974
975 Strain fitness (log2 ratio) -1
0
1 at 973.035 kb on - strand, within ABID97_RS04665 at 973.148 kb on + strand, within ABID97_RS04665 at 973.164 kb on - strand, within ABID97_RS04665 at 973.205 kb on + strand, within ABID97_RS04665 at 973.563 kb on - strand, within ABID97_RS04665 at 973.679 kb on + strand, within ABID97_RS04665 at 973.718 kb on + strand, within ABID97_RS04665 at 974.116 kb on - strand, within ABID97_RS04670 at 974.410 kb on - strand, within ABID97_RS04670 at 974.415 kb on + strand, within ABID97_RS04670 at 974.416 kb on - strand, within ABID97_RS04670 at 974.882 kb on + strand at 975.059 kb on + strand, within ABID97_RS04675 at 975.470 kb on + strand, within ABID97_RS04675 at 975.471 kb on - strand, within ABID97_RS04675 at 975.500 kb on + strand, within ABID97_RS04675 at 975.500 kb on + strand, within ABID97_RS04675 at 975.501 kb on - strand, within ABID97_RS04675 at 975.581 kb on + strand, within ABID97_RS04675 at 975.581 kb on + strand, within ABID97_RS04675 at 975.581 kb on + strand, within ABID97_RS04675 at 975.581 kb on + strand, within ABID97_RS04675 at 975.582 kb on - strand, within ABID97_RS04675 at 975.582 kb on - strand, within ABID97_RS04675 at 975.582 kb on - strand, within ABID97_RS04675 at 975.582 kb on - strand, within ABID97_RS04675 at 975.582 kb on - strand, within ABID97_RS04675
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannose (C) remove 973,035 - ABID97_RS04665 0.16 -0.1 973,148 + ABID97_RS04665 0.26 +0.2 973,164 - ABID97_RS04665 0.27 -0.6 973,205 + ABID97_RS04665 0.31 -0.1 973,563 - ABID97_RS04665 0.62 -0.2 973,679 + ABID97_RS04665 0.71 +0.0 973,718 + ABID97_RS04665 0.75 -0.5 974,116 - ABID97_RS04670 0.13 -0.1 974,410 - ABID97_RS04670 0.49 -0.4 974,415 + ABID97_RS04670 0.50 -1.4 974,416 - ABID97_RS04670 0.50 -0.3 974,882 + -0.2 975,059 + ABID97_RS04675 0.20 +0.2 975,470 + ABID97_RS04675 0.55 -0.3 975,471 - ABID97_RS04675 0.55 +0.9 975,500 + ABID97_RS04675 0.58 -0.1 975,500 + ABID97_RS04675 0.58 -0.2 975,501 - ABID97_RS04675 0.58 +0.7 975,581 + ABID97_RS04675 0.65 +0.5 975,581 + ABID97_RS04675 0.65 +0.6 975,581 + ABID97_RS04675 0.65 -0.2 975,581 + ABID97_RS04675 0.65 +0.1 975,582 - ABID97_RS04675 0.65 -0.2 975,582 - ABID97_RS04675 0.65 -0.1 975,582 - ABID97_RS04675 0.65 -1.1 975,582 - ABID97_RS04675 0.65 +0.5 975,582 - ABID97_RS04675 0.65 +0.4
Or see this region's nucleotide sequence