Experiment: D-Mannose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS04650 and ABID97_RS04655 overlap by 10 nucleotides ABID97_RS04655 and ABID97_RS04660 overlap by 1 nucleotides ABID97_RS04660 and ABID97_RS04665 are separated by 48 nucleotides
ABID97_RS04650: ABID97_RS04650 - putative zinc-binding metallopeptidase, at 969,918 to 971,312
_RS04650
ABID97_RS04655: ABID97_RS04655 - cysteine-rich CWC family protein, at 971,303 to 971,542
_RS04655
ABID97_RS04660: ABID97_RS04660 - 6-phosphofructokinase, at 971,542 to 972,798
_RS04660
ABID97_RS04665: ABID97_RS04665 - acyl-CoA dehydrogenase family protein, at 972,847 to 974,010
_RS04665
Position (kb) 971
972
973 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 970.662 kb on + strand, within ABID97_RS04650 at 970.665 kb on + strand, within ABID97_RS04650 at 970.666 kb on - strand, within ABID97_RS04650 at 970.666 kb on - strand, within ABID97_RS04650 at 970.812 kb on + strand, within ABID97_RS04650 at 970.812 kb on + strand, within ABID97_RS04650 at 970.813 kb on - strand, within ABID97_RS04650 at 970.813 kb on - strand, within ABID97_RS04650 at 970.813 kb on - strand, within ABID97_RS04650 at 970.813 kb on - strand, within ABID97_RS04650 at 970.860 kb on + strand, within ABID97_RS04650 at 970.860 kb on + strand, within ABID97_RS04650 at 970.860 kb on + strand, within ABID97_RS04650 at 971.067 kb on + strand, within ABID97_RS04650 at 971.068 kb on - strand, within ABID97_RS04650 at 971.207 kb on + strand at 971.600 kb on + strand at 971.631 kb on - strand at 971.774 kb on + strand, within ABID97_RS04660 at 971.774 kb on + strand, within ABID97_RS04660 at 971.774 kb on + strand, within ABID97_RS04660 at 971.774 kb on + strand, within ABID97_RS04660 at 971.775 kb on - strand, within ABID97_RS04660 at 972.053 kb on + strand, within ABID97_RS04660 at 972.314 kb on + strand, within ABID97_RS04660 at 972.314 kb on + strand, within ABID97_RS04660 at 972.314 kb on + strand, within ABID97_RS04660 at 972.314 kb on + strand, within ABID97_RS04660 at 972.383 kb on - strand, within ABID97_RS04660 at 972.479 kb on + strand, within ABID97_RS04660 at 972.480 kb on - strand, within ABID97_RS04660 at 972.521 kb on + strand, within ABID97_RS04660 at 972.558 kb on - strand, within ABID97_RS04660 at 972.681 kb on - strand at 972.681 kb on - strand at 972.681 kb on - strand at 972.776 kb on + strand at 972.776 kb on + strand at 972.777 kb on - strand at 972.777 kb on - strand at 972.912 kb on - strand at 972.912 kb on - strand at 972.912 kb on - strand at 972.939 kb on - strand at 973.035 kb on - strand, within ABID97_RS04665 at 973.148 kb on + strand, within ABID97_RS04665 at 973.164 kb on - strand, within ABID97_RS04665 at 973.205 kb on + strand, within ABID97_RS04665 at 973.563 kb on - strand, within ABID97_RS04665 at 973.679 kb on + strand, within ABID97_RS04665 at 973.718 kb on + strand, within ABID97_RS04665
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannose (C) remove 970,662 + ABID97_RS04650 0.53 -0.5 970,665 + ABID97_RS04650 0.54 -0.7 970,666 - ABID97_RS04650 0.54 +0.6 970,666 - ABID97_RS04650 0.54 -0.1 970,812 + ABID97_RS04650 0.64 -0.5 970,812 + ABID97_RS04650 0.64 +1.2 970,813 - ABID97_RS04650 0.64 -0.0 970,813 - ABID97_RS04650 0.64 +0.1 970,813 - ABID97_RS04650 0.64 -0.4 970,813 - ABID97_RS04650 0.64 -0.2 970,860 + ABID97_RS04650 0.68 +0.1 970,860 + ABID97_RS04650 0.68 -0.4 970,860 + ABID97_RS04650 0.68 -1.2 971,067 + ABID97_RS04650 0.82 -0.1 971,068 - ABID97_RS04650 0.82 +0.5 971,207 + -0.1 971,600 + -0.7 971,631 - +0.4 971,774 + ABID97_RS04660 0.18 -0.6 971,774 + ABID97_RS04660 0.18 +0.3 971,774 + ABID97_RS04660 0.18 -1.1 971,774 + ABID97_RS04660 0.18 -1.0 971,775 - ABID97_RS04660 0.19 -0.4 972,053 + ABID97_RS04660 0.41 +0.7 972,314 + ABID97_RS04660 0.61 -1.3 972,314 + ABID97_RS04660 0.61 -0.9 972,314 + ABID97_RS04660 0.61 -0.3 972,314 + ABID97_RS04660 0.61 +0.2 972,383 - ABID97_RS04660 0.67 -0.4 972,479 + ABID97_RS04660 0.75 -0.6 972,480 - ABID97_RS04660 0.75 -0.6 972,521 + ABID97_RS04660 0.78 -0.8 972,558 - ABID97_RS04660 0.81 -0.6 972,681 - +0.0 972,681 - -0.5 972,681 - -0.3 972,776 + -0.4 972,776 + -0.5 972,777 - +1.2 972,777 - -3.8 972,912 - +0.1 972,912 - +0.2 972,912 - -0.2 972,939 - -0.4 973,035 - ABID97_RS04665 0.16 -0.1 973,148 + ABID97_RS04665 0.26 +0.2 973,164 - ABID97_RS04665 0.27 -0.6 973,205 + ABID97_RS04665 0.31 -0.1 973,563 - ABID97_RS04665 0.62 -0.2 973,679 + ABID97_RS04665 0.71 +0.0 973,718 + ABID97_RS04665 0.75 -0.5
Or see this region's nucleotide sequence