Strain Fitness in Escherichia coli BW25113 around b4487

Experiment: Cisplatin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.1 mg/ml
4,310,919	-	rpiR	b4089	0.89	+1.0
4,310,919	-	rpiR	b4089	0.89	+1.0
4,310,943	-				+0.3
4,310,969	+				-0.7
4,310,969	+				+0.4
4,310,969	+				-0.7
4,310,969	+				-1.1
4,310,971	-				+2.2
4,310,977	-				+2.1
4,310,977	-				+0.7
4,310,977	-				-1.6
4,310,977	-				+0.9
4,310,978	-				+0.1
4,310,992	+				+2.4
4,311,021	+				-0.0
4,311,052	-				+2.8
4,311,056	-				+0.9
4,311,242	+				-1.4
4,311,242	+				+5.6
4,311,499	-	rpiB	b4090	0.28	+0.6
4,311,629	+	rpiB	b4090	0.57	-2.2
4,311,639	+	rpiB	b4090	0.59	-0.4
4,311,639	+	rpiB	b4090	0.59	+0.6
4,311,674	-	rpiB	b4090	0.67	-1.7
4,311,710	+	rpiB	b4090	0.75	-2.0
4,311,744	+	rpiB	b4090	0.82	+0.2
4,311,744	+	rpiB	b4090	0.82	+1.8
4,311,744	+	rpiB	b4090	0.82	-0.8
4,311,754	+	rpiB	b4090	0.85	+0.2
4,311,756	+	rpiB	b4090	0.85	-0.1
4,311,756	+	rpiB	b4090	0.85	-0.5
4,311,756	+	rpiB	b4090	0.85	-0.3
4,311,797	+				-0.2
4,311,852	-				+1.4
4,311,852	-				+1.4
4,311,889	-				-0.2
4,311,933	-	yjdP	b4487	0.13	-0.7
4,311,933	-	yjdP	b4487	0.13	-1.4
4,311,943	-	yjdP	b4487	0.16	+0.7
4,311,969	-	yjdP	b4487	0.24	-0.6
4,311,969	-	yjdP	b4487	0.24	-1.7
4,311,983	-	yjdP	b4487	0.28	-1.2
4,311,983	-	yjdP	b4487	0.28	-0.6
4,312,006	+	yjdP	b4487	0.35	-1.6
4,312,006	+	yjdP	b4487	0.35	-2.3
4,312,006	+	yjdP	b4487	0.35	-0.7
4,312,020	-	yjdP	b4487	0.39	-0.2
4,312,068	-	yjdP	b4487	0.54	-1.1
4,312,193	+				-0.2
4,312,202	+				-2.9
4,312,227	-				+3.0
4,312,256	+				+1.3
4,312,263	-				+0.7
4,312,338	-				-0.2
4,312,375	+				+0.3
4,312,418	-				-1.0
4,312,418	-				-1.4
4,312,567	+	phnP	b4092	0.26	+5.8
4,312,658	-	phnP	b4092	0.38	+0.4
4,312,658	-	phnP	b4092	0.38	-1.4
4,312,663	-	phnP	b4092	0.39	+1.4
4,312,663	-	phnP	b4092	0.39	-1.7
4,312,668	-	phnP	b4092	0.40	+0.8
4,312,668	-	phnP	b4092	0.40	+0.9
4,312,700	+	phnP	b4092	0.44	+0.9
4,312,714	-	phnP	b4092	0.46	-0.0
4,312,720	+	phnP	b4092	0.47	+0.4
4,312,720	+	phnP	b4092	0.47	+0.4
4,312,721	-	phnP	b4092	0.47	+0.8
4,312,728	-	phnP	b4092	0.48	-1.8
4,312,788	-	phnP	b4092	0.55	+1.0
4,312,803	+	phnP	b4092	0.57	+0.4
4,312,808	+	phnP	b4092	0.58	-1.2
4,312,948	-	phnP	b4092	0.77	-0.3
4,312,965	-	phnP	b4092	0.79	-1.1
4,313,024	-	phnP	b4092	0.87	-0.3
4,313,041	+	phnP	b4092	0.89	-2.0
4,313,060	+				+0.7
4,313,094	-				-0.9
4,313,115	-				-1.6
4,313,115	-				-0.9
4,313,127	+				-0.9
4,313,185	-	phnO	b4093	0.13	-0.4
4,313,195	-	phnO	b4093	0.16	+0.7