Strain Fitness in Escherichia coli BW25113 around b4524

Experiment: Cisplatin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.1 mg/ml
1,377,850	-	ycjT	b1316	0.86	-0.2
1,377,854	+	ycjT	b1316	0.86	+0.5
1,377,967	+				+0.3
1,378,082	+				-3.3
1,378,082	+				-1.4
1,378,093	+				-0.1
1,378,093	+				+0.5
1,378,273	-	ycjU	b1317	0.15	-0.2
1,378,326	-	ycjU	b1317	0.23	-0.0
1,378,659	-	ycjU	b1317	0.74	-1.4
1,378,707	+	ycjU	b1317	0.81	-1.0
1,378,711	-	ycjU	b1317	0.82	-0.8
1,378,887	+				+0.2
1,379,330	+	ycjV	b4524	0.45	+0.0
1,379,332	+	ycjV	b4524	0.45	+0.9
1,379,332	+	ycjV	b4524	0.45	-0.9
1,379,380	-	ycjV	b4524	0.49	+0.2
1,379,416	-	ycjV	b4524	0.53	-1.6
1,379,443	+	ycjV	b4524	0.55	-0.1
1,379,443	+	ycjV	b4524	0.55	+0.3
1,379,481	+	ycjV	b4524	0.59	+1.0
1,379,488	+	ycjV	b4524	0.59	+0.7
1,379,498	+	ycjV	b4524	0.60	-0.9
1,379,546	+	ycjV	b4524	0.65	-1.8
1,379,612	+	ycjV	b4524	0.71	+1.8
1,379,612	+	ycjV	b4524	0.71	+2.9
1,379,665	+	ycjV	b4524	0.76	-0.2
1,379,675	+	ycjV	b4524	0.77	-0.7
1,379,675	+	ycjV	b4524	0.77	+1.3
1,379,710	+	ycjV	b4524	0.80	-0.7
1,379,760	+	ycjV	b4524	0.85	-0.8
1,379,760	+	ycjV	b4524	0.85	-0.2
1,379,769	+	ycjV	b4524	0.85	+1.5
1,379,769	+	ycjV	b4524	0.85	+1.2
1,379,770	+	ycjV	b4524	0.85	-0.7
1,379,786	+	ycjV	b4524	0.87	+0.6
1,379,791	+	ycjV	b4524	0.87	-1.4
1,379,793	+	ycjV	b4524	0.88	-1.4
1,379,799	-	ycjV	b4524	0.88	-0.1
1,379,803	-	ycjV	b4524	0.89	-2.4
1,379,808	+	ycjV	b4524	0.89	+0.0
1,379,808	+	ycjV	b4524	0.89	-1.1
1,379,820	+				-0.1
1,379,820	+				-0.8
1,379,820	+				+0.9
1,379,959	-				+1.9
1,379,993	-				-0.6
1,379,998	-				+1.0
1,379,998	-				+0.8
1,380,000	+				-0.4
1,380,016	-				+0.2
1,380,016	-				-1.6
1,380,016	-				+0.6
1,380,021	-				+1.1
1,380,026	-				+1.2
1,380,026	-				+2.4
1,380,026	-				-1.7
1,380,038	-				+0.4
1,380,044	-				+0.6
1,380,044	-				-1.1
1,380,055	-				+0.2
1,380,062	-	ompG	b1319	0.10	-0.0
1,380,062	-	ompG	b1319	0.10	+1.6
1,380,078	-	ompG	b1319	0.12	+0.0
1,380,078	-	ompG	b1319	0.12	+1.1
1,380,078	-	ompG	b1319	0.12	-1.3
1,380,106	+	ompG	b1319	0.15	-0.0
1,380,106	+	ompG	b1319	0.15	+0.2
1,380,112	-	ompG	b1319	0.16	-0.1
1,380,113	-	ompG	b1319	0.16	-0.4
1,380,114	-	ompG	b1319	0.16	-0.0
1,380,114	-	ompG	b1319	0.16	-0.1
1,380,114	-	ompG	b1319	0.16	+0.2
1,380,114	-	ompG	b1319	0.16	+1.3
1,380,116	+	ompG	b1319	0.16	+0.6
1,380,124	-	ompG	b1319	0.17	-1.1
1,380,129	-	ompG	b1319	0.17	-0.1
1,380,164	-	ompG	b1319	0.21	+0.5
1,380,196	+	ompG	b1319	0.25	-0.4
1,380,199	-	ompG	b1319	0.25	+0.7
1,380,204	-	ompG	b1319	0.26	+0.4
1,380,204	-	ompG	b1319	0.26	-1.6
1,380,206	-	ompG	b1319	0.26	+0.7
1,380,219	-	ompG	b1319	0.27	+1.0
1,380,234	-	ompG	b1319	0.29	+0.6
1,380,236	+	ompG	b1319	0.29	-0.6
1,380,241	+	ompG	b1319	0.30	-0.8
1,380,244	-	ompG	b1319	0.30	+2.0
1,380,249	-	ompG	b1319	0.31	+1.0
1,380,337	-	ompG	b1319	0.40	+2.6
1,380,340	+	ompG	b1319	0.41	-0.2
1,380,348	-	ompG	b1319	0.42	-1.4
1,380,363	-	ompG	b1319	0.43	+0.3
1,380,381	+	ompG	b1319	0.45	+0.8
1,380,383	+	ompG	b1319	0.45	+1.8
1,380,389	-	ompG	b1319	0.46	-0.2
1,380,419	+	ompG	b1319	0.49	-1.1
1,380,453	+	ompG	b1319	0.53	+2.9
1,380,453	+	ompG	b1319	0.53	-1.8
1,380,465	+	ompG	b1319	0.55	-0.4
1,380,465	+	ompG	b1319	0.55	-0.5
1,380,472	+	ompG	b1319	0.55	-0.0
1,380,473	-	ompG	b1319	0.55	+0.3
1,380,499	+	ompG	b1319	0.58	+2.8
1,380,515	-	ompG	b1319	0.60	-1.1
1,380,543	+	ompG	b1319	0.63	+0.2
1,380,543	+	ompG	b1319	0.63	+0.9
1,380,545	+	ompG	b1319	0.63	+1.9
1,380,579	+	ompG	b1319	0.67	+0.2
1,380,657	-	ompG	b1319	0.76	-1.4
1,380,670	+	ompG	b1319	0.77	+0.9
1,380,670	+	ompG	b1319	0.77	+0.1
1,380,670	+	ompG	b1319	0.77	+1.6
1,380,696	-	ompG	b1319	0.80	-1.3
1,380,702	+	ompG	b1319	0.81	+0.9
1,380,811	+				+0.7
1,380,811	+				+0.7
1,380,822	+				-2.7
1,380,830	+				+1.2
1,380,830	+				+0.2
1,380,899	+				-0.5