Strain Fitness in Escherichia coli BW25113 around b4403
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 4,638,330 | - | -1.0 | |||
| 4,638,434 | + | -1.4 | |||
| 4,638,491 | + | yjjY | b4402 | 0.47 | -1.2 |
| 4,638,491 | + | yjjY | b4402 | 0.47 | -1.6 |
| 4,638,568 | + | +0.4 | |||
| 4,638,577 | - | +0.1 | |||
| 4,638,579 | + | +1.4 | |||
| 4,638,928 | + | +0.6 | |||
| 4,639,075 | + | yjtD | b4403 | 0.16 | -1.6 |
| 4,639,075 | + | yjtD | b4403 | 0.16 | -1.2 |
| 4,639,207 | - | yjtD | b4403 | 0.35 | -0.8 |
| 4,639,207 | - | yjtD | b4403 | 0.35 | +3.0 |
| 4,639,230 | - | yjtD | b4403 | 0.39 | +0.1 |
| 4,639,274 | + | yjtD | b4403 | 0.45 | +0.0 |
| 4,639,321 | + | yjtD | b4403 | 0.52 | -1.2 |
| 4,639,321 | + | yjtD | b4403 | 0.52 | +0.1 |
| 4,639,329 | - | yjtD | b4403 | 0.53 | +1.4 |
| 4,639,385 | - | yjtD | b4403 | 0.61 | -0.2 |
| 4,639,385 | - | yjtD | b4403 | 0.61 | +0.4 |
| 4,639,476 | + | yjtD | b4403 | 0.74 | -1.1 |
| 4,639,523 | + | yjtD | b4403 | 0.81 | -1.6 |
| 4,639,560 | + | yjtD | b4403 | 0.87 | -1.6 |
| 4,639,581 | - | yjtD | b4403 | 0.90 | -0.3 |
| 4,639,614 | - | +1.0 |
Or see this region's nucleotide sequence