Strain Fitness in Escherichia coli BW25113 around b4326
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,554,070 | - | yjiC | b4325 | 0.67 | +1.0 |
4,554,733 | - | +0.3 | |||
4,554,736 | + | -1.0 | |||
4,554,736 | + | +0.3 | |||
4,554,736 | + | +1.8 | |||
4,554,847 | + | +1.9 | |||
4,554,866 | - | +1.4 | |||
4,554,884 | + | +0.3 | |||
4,554,886 | - | -0.2 | |||
4,554,892 | - | +1.4 | |||
4,554,892 | - | -0.2 | |||
4,554,894 | + | -1.6 | |||
4,554,894 | + | -2.1 | |||
4,554,894 | + | -0.9 | |||
4,554,894 | + | +1.2 | |||
4,554,895 | + | +1.4 | |||
4,554,895 | + | +0.4 | |||
4,554,902 | - | +1.5 | |||
4,554,905 | + | -1.2 | |||
4,554,908 | - | +1.2 | |||
4,554,908 | - | +0.8 | |||
4,554,917 | - | +0.8 | |||
4,554,917 | - | -0.6 | |||
4,554,940 | - | -1.2 | |||
4,554,940 | - | -0.7 | |||
4,554,950 | + | -0.6 | |||
4,554,950 | + | -0.9 | |||
4,554,950 | + | +0.4 | |||
4,554,950 | + | -0.9 | |||
4,554,950 | + | +0.8 | |||
4,554,951 | + | +2.1 | |||
4,554,951 | + | -2.1 | |||
4,554,953 | + | +2.5 | |||
4,554,953 | + | +3.5 | |||
4,554,956 | - | +0.8 | |||
4,554,958 | - | +1.4 | |||
4,554,968 | + | +1.6 | |||
4,554,970 | + | -0.8 | |||
4,554,970 | + | +0.6 | |||
4,554,978 | - | +2.6 | |||
4,554,984 | + | -2.7 | |||
4,554,999 | + | -0.9 | |||
4,554,999 | + | -1.4 | |||
4,555,090 | + | yjiD | b4326 | 0.19 | +1.6 |
4,555,110 | - | yjiD | b4326 | 0.24 | -0.7 |
4,555,149 | + | yjiD | b4326 | 0.34 | -1.6 |
4,555,157 | - | yjiD | b4326 | 0.36 | +0.1 |
4,555,161 | - | yjiD | b4326 | 0.37 | +1.8 |
4,555,161 | - | yjiD | b4326 | 0.37 | -0.5 |
4,555,164 | + | yjiD | b4326 | 0.38 | -1.7 |
4,555,166 | - | yjiD | b4326 | 0.38 | +3.0 |
4,555,172 | + | yjiD | b4326 | 0.40 | +1.6 |
4,555,180 | - | yjiD | b4326 | 0.42 | -0.4 |
4,555,181 | - | yjiD | b4326 | 0.42 | +3.4 |
4,555,196 | - | yjiD | b4326 | 0.46 | +0.7 |
4,555,204 | - | yjiD | b4326 | 0.48 | +0.9 |
4,555,207 | + | yjiD | b4326 | 0.49 | -0.2 |
4,555,207 | + | yjiD | b4326 | 0.49 | -0.9 |
4,555,234 | + | yjiD | b4326 | 0.55 | +0.2 |
4,555,246 | + | yjiD | b4326 | 0.59 | +0.2 |
4,555,246 | + | yjiD | b4326 | 0.59 | -0.4 |
4,555,273 | + | yjiD | b4326 | 0.65 | -0.6 |
4,555,280 | + | yjiD | b4326 | 0.67 | +0.7 |
4,555,282 | + | yjiD | b4326 | 0.68 | +0.8 |
4,555,290 | + | yjiD | b4326 | 0.70 | +1.4 |
4,555,296 | + | yjiD | b4326 | 0.71 | +0.5 |
4,555,296 | + | yjiD | b4326 | 0.71 | -0.2 |
4,555,296 | - | yjiD | b4326 | 0.71 | -0.1 |
4,555,296 | - | yjiD | b4326 | 0.71 | +1.6 |
4,555,308 | + | yjiD | b4326 | 0.74 | +3.3 |
4,555,308 | + | yjiD | b4326 | 0.74 | +2.1 |
4,555,308 | + | yjiD | b4326 | 0.74 | -1.6 |
4,555,308 | + | yjiD | b4326 | 0.74 | +1.5 |
4,555,314 | + | +1.4 | |||
4,555,316 | - | yjiD | b4326 | 0.76 | -1.4 |
4,555,316 | - | yjiD | b4326 | 0.76 | +0.4 |
4,555,327 | - | yjiD | b4326 | 0.79 | +0.9 |
4,555,327 | - | yjiD | b4326 | 0.79 | -1.4 |
4,555,332 | - | yjiD | b4326 | 0.80 | -0.2 |
4,555,332 | - | yjiD | b4326 | 0.80 | -0.4 |
4,555,398 | - | -1.3 | |||
4,555,407 | - | +0.8 | |||
4,555,415 | + | +0.9 | |||
4,555,415 | + | +2.1 | |||
4,555,498 | + | +0.4 | |||
4,555,498 | + | yjiE | b4327 | 0.11 | -1.0 |
4,555,667 | + | yjiE | b4327 | 0.29 | +1.3 |
4,555,731 | + | yjiE | b4327 | 0.36 | -0.9 |
4,555,739 | - | -0.6 | |||
4,555,764 | - | yjiE | b4327 | 0.40 | +0.9 |
4,555,764 | - | yjiE | b4327 | 0.40 | +0.9 |
4,555,791 | - | yjiE | b4327 | 0.43 | -0.4 |
4,555,976 | + | yjiE | b4327 | 0.63 | +1.0 |
4,556,042 | - | yjiE | b4327 | 0.70 | +0.1 |
4,556,106 | + | yjiE | b4327 | 0.77 | -0.2 |
4,556,168 | + | yjiE | b4327 | 0.84 | +0.1 |
4,556,168 | + | yjiE | b4327 | 0.84 | +0.6 |
4,556,334 | - | -0.1 | |||
4,556,382 | - | +1.1 | |||
4,556,382 | - | +1.5 |
Or see this region's nucleotide sequence