Strain Fitness in Escherichia coli BW25113 around b4101
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,318,321 | - | phnI | b4099 | 0.66 | -0.6 |
4,318,326 | - | phnI | b4099 | 0.66 | -1.4 |
4,318,392 | + | phnI | b4099 | 0.72 | +1.5 |
4,318,400 | + | phnI | b4099 | 0.73 | +0.2 |
4,318,489 | - | phnI | b4099 | 0.81 | -1.4 |
4,318,549 | + | phnI | b4099 | 0.87 | -0.9 |
4,318,635 | - | -0.6 | |||
4,318,635 | - | +0.1 | |||
4,318,687 | - | +0.7 | |||
4,318,702 | - | +1.1 | |||
4,318,748 | - | phnH | b4100 | 0.11 | +2.5 |
4,318,799 | - | phnH | b4100 | 0.19 | -2.4 |
4,318,814 | + | phnH | b4100 | 0.22 | -0.7 |
4,318,855 | + | phnH | b4100 | 0.29 | +2.1 |
4,318,855 | + | phnH | b4100 | 0.29 | +0.1 |
4,319,165 | + | phnH | b4100 | 0.82 | -0.6 |
4,319,223 | + | +0.5 | |||
4,319,223 | + | +1.5 | |||
4,319,223 | + | -0.3 | |||
4,319,228 | + | +0.3 | |||
4,319,258 | + | +1.8 | |||
4,319,258 | + | +0.5 | |||
4,319,259 | + | +2.2 | |||
4,319,274 | - | +0.9 | |||
4,319,279 | - | -1.6 | |||
4,319,279 | - | -0.6 | |||
4,319,354 | - | phnG | b4101 | 0.19 | +0.1 |
4,319,366 | - | phnG | b4101 | 0.22 | -0.2 |
4,319,379 | - | phnG | b4101 | 0.25 | +1.4 |
4,319,434 | - | phnG | b4101 | 0.37 | -0.2 |
4,319,446 | - | phnG | b4101 | 0.40 | -1.0 |
4,319,573 | + | phnG | b4101 | 0.68 | +2.2 |
4,319,731 | - | +0.3 | |||
4,319,731 | - | -0.7 | |||
4,319,803 | + | phnF | b4102 | 0.11 | +1.4 |
4,319,803 | + | phnF | b4102 | 0.11 | +1.4 |
4,319,803 | + | phnF | b4102 | 0.11 | +0.0 |
4,319,811 | - | phnF | b4102 | 0.13 | +3.0 |
4,319,811 | - | phnF | b4102 | 0.13 | -1.2 |
4,319,985 | - | phnF | b4102 | 0.37 | -0.7 |
4,319,999 | + | phnF | b4102 | 0.38 | -0.9 |
4,320,073 | - | phnF | b4102 | 0.49 | +0.8 |
4,320,121 | - | phnF | b4102 | 0.55 | -1.2 |
4,320,253 | - | phnF | b4102 | 0.73 | +0.2 |
4,320,253 | - | phnF | b4102 | 0.73 | -0.9 |
4,320,292 | + | phnF | b4102 | 0.79 | -1.2 |
4,320,326 | + | phnF | b4102 | 0.83 | -1.3 |
4,320,348 | - | phnF | b4102 | 0.87 | -1.4 |
4,320,405 | - | -0.4 | |||
4,320,412 | + | -0.6 | |||
4,320,412 | + | -0.6 | |||
4,320,652 | - | phnE | b4104 | 0.50 | +1.8 |
4,320,670 | - | phnE | b4104 | 0.55 | +1.7 |
4,320,678 | - | phnE | b4104 | 0.57 | +1.3 |
4,320,691 | + | phnE | b4104 | 0.60 | +0.5 |
Or see this region's nucleotide sequence