Strain Fitness in Escherichia coli BW25113 around b3893

Experiment: Cisplatin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.1 mg/ml
4,078,981	-	fdhE	b3891	0.71	-1.1
4,078,981	-	fdhE	b3891	0.71	-0.9
4,078,991	-	fdhE	b3891	0.72	+0.7
4,079,019	+	fdhE	b3891	0.75	+2.3
4,079,038	-	fdhE	b3891	0.77	-1.6
4,079,042	+	fdhE	b3891	0.77	+1.6
4,079,058	+	fdhE	b3891	0.79	-0.5
4,079,064	-	fdhE	b3891	0.80	+1.2
4,079,092	+	fdhE	b3891	0.83	+1.7
4,079,120	-	fdhE	b3891	0.86	-0.2
4,079,195	-				+1.5
4,079,195	-				-1.1
4,079,195	-				+1.2
4,079,198	-				+1.9
4,079,280	+				+1.4
4,079,291	-				+1.7
4,079,295	-				-0.5
4,079,295	-				+1.8
4,079,309	-				+2.1
4,079,325	+	fdoI	b3892	0.12	+1.3
4,079,325	-	fdoI	b3892	0.12	+2.2
4,079,325	-	fdoI	b3892	0.12	+4.3
4,079,340	-	fdoI	b3892	0.14	+0.2
4,079,343	-	fdoI	b3892	0.15	+1.2
4,079,380	+	fdoI	b3892	0.21	-1.6
4,079,380	+	fdoI	b3892	0.21	+1.2
4,079,380	+	fdoI	b3892	0.21	-1.0
4,079,388	-	fdoI	b3892	0.22	+1.5
4,079,388	-	fdoI	b3892	0.22	+4.0
4,079,438	-	fdoI	b3892	0.30	+1.0
4,079,581	-	fdoI	b3892	0.52	+2.3
4,079,581	-	fdoI	b3892	0.52	-0.5
4,079,581	-	fdoI	b3892	0.52	+2.2
4,079,581	-	fdoI	b3892	0.52	+1.8
4,079,586	-	fdoI	b3892	0.53	+2.3
4,079,626	+	fdoI	b3892	0.59	+0.3
4,079,654	-	fdoI	b3892	0.64	-0.1
4,079,654	-	fdoI	b3892	0.64	+2.6
4,079,665	-	fdoI	b3892	0.66	-0.8
4,079,665	-	fdoI	b3892	0.66	+0.1
4,079,680	-	fdoI	b3892	0.68	+0.7
4,079,689	+	fdoI	b3892	0.69	+0.2
4,079,741	+	fdoI	b3892	0.78	-0.3
4,079,761	+	fdoI	b3892	0.81	+1.5
4,079,766	-	fdoI	b3892	0.81	+1.7
4,079,769	-	fdoI	b3892	0.82	+2.8
4,079,769	-	fdoI	b3892	0.82	+0.1
4,079,818	-	fdoI	b3892	0.90	+1.2
4,079,832	-				+2.7
4,079,903	-				+0.5
4,079,903	-				+1.3
4,079,930	-				+1.3
4,079,930	-				+0.2
4,079,937	+				+2.7
4,079,945	-				+0.8
4,079,945	-				+2.5
4,079,945	-				+1.1
4,079,945	-				+2.8
4,079,960	-				+1.0
4,079,965	+				+1.2
4,079,999	-	fdoH	b3893	0.13	+2.5
4,079,999	-	fdoH	b3893	0.13	+0.2
4,080,077	-	fdoH	b3893	0.22	+1.9
4,080,096	+	fdoH	b3893	0.24	-0.3
4,080,096	+	fdoH	b3893	0.24	+0.1
4,080,096	+	fdoH	b3893	0.24	+1.2
4,080,104	+	fdoH	b3893	0.25	-0.1
4,080,104	-	fdoH	b3893	0.25	+2.3
4,080,105	-	fdoH	b3893	0.25	+1.0
4,080,121	-	fdoH	b3893	0.27	+0.4
4,080,138	+	fdoH	b3893	0.29	+1.2
4,080,141	+	fdoH	b3893	0.29	+2.0
4,080,165	-	fdoH	b3893	0.32	+0.9
4,080,169	+	fdoH	b3893	0.32	+6.9
4,080,278	+	fdoH	b3893	0.44	+4.3
4,080,288	+	fdoH	b3893	0.45	+0.7
4,080,299	+	fdoH	b3893	0.46	+2.2
4,080,299	+	fdoH	b3893	0.46	+2.1
4,080,345	+	fdoH	b3893	0.51	+0.2
4,080,394	+	fdoH	b3893	0.57	+1.8
4,080,395	-	fdoH	b3893	0.57	+2.1
4,080,410	-	fdoH	b3893	0.59	-0.1
4,080,415	+	fdoH	b3893	0.59	-0.5
4,080,415	+	fdoH	b3893	0.59	-0.1
4,080,460	-	fdoH	b3893	0.64	+0.5
4,080,460	-	fdoH	b3893	0.64	+2.7
4,080,462	+	fdoH	b3893	0.64	+2.8
4,080,480	-	fdoH	b3893	0.66	+0.5
4,080,486	-	fdoH	b3893	0.67	-0.8
4,080,486	-	fdoH	b3893	0.67	-0.1
4,080,540	+	fdoH	b3893	0.73	+2.4
4,080,548	-	fdoH	b3893	0.74	+0.3
4,080,571	+	fdoH	b3893	0.77	-0.8
4,080,582	+	fdoH	b3893	0.78	+1.5
4,080,582	+	fdoH	b3893	0.78	+0.3
4,080,598	-	fdoH	b3893	0.80	+0.9
4,080,598	-	fdoH	b3893	0.80	+1.2
4,080,598	-	fdoH	b3893	0.80	+0.4
4,080,608	+	fdoH	b3893	0.81	+1.3
4,080,632	-	fdoH	b3893	0.83	+0.3
4,080,649	-	fdoH	b3893	0.85	+2.9
4,080,653	+	fdoH	b3893	0.86	+3.7
4,080,653	+	fdoH	b3893	0.86	+2.2
4,080,670	+	fdoH	b3893	0.87	+0.8
4,080,670	+	fdoH	b3893	0.87	-0.7
4,080,707	-				-1.5
4,080,707	-				+3.2
4,080,786	-				+1.2
4,080,786	-				+0.5
4,080,792	+				+0.7
4,080,831	-				+0.5
4,080,842	+				+2.4
4,080,864	-				-0.3
4,080,904	+				+3.8
4,080,926	+				+1.7
4,081,022	-				+0.1
4,081,022	-				+1.3
4,081,025	+				+0.3
4,081,038	+				+1.8
4,081,038	+				+0.5
4,081,041	-				+1.9
4,081,041	-				+2.3
4,081,047	-				+1.3
4,081,123	+	fdoG	b3894	0.11	-0.2
4,081,123	+	fdoG	b3894	0.11	+1.3
4,081,189	+	fdoG	b3894	0.13	+2.1
4,081,189	+	fdoG	b3894	0.13	+3.5
4,081,189	+	fdoG	b3894	0.13	+4.0
4,081,194	+	fdoG	b3894	0.13	+1.1
4,081,315	+	fdoG	b3894	0.17	+1.3
4,081,315	+	fdoG	b3894	0.17	+1.5
4,081,321	+	fdoG	b3894	0.17	+1.8
4,081,323	+	fdoG	b3894	0.17	+1.6
4,081,416	+	fdoG	b3894	0.20	+3.7
4,081,438	-	fdoG	b3894	0.21	+0.5
4,081,443	-	fdoG	b3894	0.21	-0.3
4,081,443	-	fdoG	b3894	0.21	-0.5
4,081,468	+	fdoG	b3894	0.22	+1.4
4,081,482	-	fdoG	b3894	0.23	+1.5
4,081,537	-	fdoG	b3894	0.24	+2.4
4,081,545	+	fdoG	b3894	0.25	+1.1
4,081,576	+	fdoG	b3894	0.26	+2.0
4,081,612	-	fdoG	b3894	0.27	-0.7
4,081,612	-	fdoG	b3894	0.27	-1.1
4,081,620	-	fdoG	b3894	0.27	+0.5
4,081,646	-	fdoG	b3894	0.28	-0.3
4,081,652	-	fdoG	b3894	0.28	+3.5
4,081,654	-	fdoG	b3894	0.28	+3.6
4,081,654	-	fdoG	b3894	0.28	+1.9
4,081,687	-	fdoG	b3894	0.29	+2.2
4,081,753	-	fdoG	b3894	0.31	+1.1
4,081,753	-	fdoG	b3894	0.31	+1.0