Strain Fitness in Escherichia coli BW25113 around b3680

Experiment: Cisplatin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.1 mg/ml
3,857,353	+	yidK	b3679	0.54	+1.2
3,857,361	-	yidK	b3679	0.55	+1.6
3,857,365	+	yidK	b3679	0.55	+0.7
3,857,378	+	yidK	b3679	0.56	-0.5
3,857,378	+	yidK	b3679	0.56	-0.2
3,857,401	-	yidK	b3679	0.57	-2.4
3,857,460	+	yidK	b3679	0.60	+2.8
3,857,460	+	yidK	b3679	0.60	+0.5
3,857,471	-	yidK	b3679	0.61	-2.9
3,857,471	-	yidK	b3679	0.61	+0.2
3,857,471	-	yidK	b3679	0.61	-1.3
3,857,481	-	yidK	b3679	0.62	-1.5
3,857,481	-	yidK	b3679	0.62	+3.9
3,857,493	-	yidK	b3679	0.62	-0.1
3,857,493	-	yidK	b3679	0.62	-0.9
3,857,493	-	yidK	b3679	0.62	-2.0
3,857,498	-	yidK	b3679	0.63	-0.8
3,857,530	+	yidK	b3679	0.64	+1.2
3,857,551	+	yidK	b3679	0.66	+0.8
3,857,578	+	yidK	b3679	0.67	-0.8
3,857,593	+	yidK	b3679	0.68	+0.8
3,857,601	-	yidK	b3679	0.69	+0.2
3,857,669	+	yidK	b3679	0.73	+2.0
3,857,669	+	yidK	b3679	0.73	+0.2
3,857,723	+	yidK	b3679	0.76	+0.0
3,857,723	+	yidK	b3679	0.76	-2.3
3,857,731	-	yidK	b3679	0.76	-0.3
3,857,838	-	yidK	b3679	0.82	-0.4
3,857,838	-	yidK	b3679	0.82	-1.4
3,857,902	+	yidK	b3679	0.86	+0.4
3,857,910	-	yidK	b3679	0.87	+0.7
3,857,915	+	yidK	b3679	0.87	+1.6
3,857,931	+	yidK	b3679	0.88	+0.1
3,857,949	-	yidK	b3679	0.89	+0.6
3,857,959	+	yidK	b3679	0.89	+0.3
3,857,962	-	yidK	b3679	0.90	+0.0
3,857,991	-				+0.7
3,857,991	-				-0.1
3,857,991	-				-0.3
3,858,005	-				+0.6
3,858,053	+				-1.2
3,858,053	+				-1.9
3,858,062	+				-0.4
3,858,062	+				+0.7
3,858,070	+				-1.1
3,858,073	+				-0.1
3,858,073	+				-2.1
3,858,073	+				-0.9
3,858,078	-				-0.5
3,858,078	-				+0.2
3,858,078	-				+2.1
3,858,078	-				+0.5
3,858,081	-				+0.7
3,858,081	-				+0.5
3,858,092	+				-0.4
3,858,095	+				+0.5
3,858,095	+				-0.1
3,858,100	+				+0.5
3,858,100	+				+3.1
3,858,100	+				+1.9
3,858,103	-				-1.7
3,858,103	-				+0.5
3,858,140	+				-0.5
3,858,152	+				-0.1
3,858,171	-				+0.6
3,858,171	-				+1.5
3,858,172	-				-1.6
3,858,178	+				-0.1
3,858,178	+				+0.5
3,858,178	+				-0.1
3,858,178	+				-2.0
3,858,178	+				-0.6
3,858,190	+				-0.1
3,858,190	+				-0.2
3,858,198	+				+2.0
3,858,203	+				-0.1
3,858,217	+				-0.0
3,858,217	+				+2.4
3,858,234	+				-0.9
3,858,241	+				+1.2
3,858,241	+				-1.6
3,858,241	+				-2.6
3,858,241	+				+3.5
3,858,241	+				+0.3
3,858,241	+				-1.2
3,858,241	+				-0.1
3,858,241	+				+3.9
3,858,241	+				+1.5
3,858,249	-				+0.4
3,858,274	-				+1.3
3,858,274	-				-0.3
3,858,296	+				+0.7
3,858,296	+				+0.1
3,858,419	-	yidL	b3680	0.13	-0.2
3,858,420	+	yidL	b3680	0.13	-3.2
3,858,420	+	yidL	b3680	0.13	+0.1
3,858,425	+	yidL	b3680	0.13	-2.0
3,858,427	-	yidL	b3680	0.14	+0.8
3,858,427	-	yidL	b3680	0.14	-0.1
3,858,428	-	yidL	b3680	0.14	+0.9
3,858,445	-	yidL	b3680	0.16	+2.5
3,858,447	+	yidL	b3680	0.16	-0.9
3,858,447	+	yidL	b3680	0.16	+0.8
3,858,490	+	yidL	b3680	0.21	-0.6
3,858,490	+	yidL	b3680	0.21	+0.6
3,858,492	+	yidL	b3680	0.21	-1.1
3,858,497	+	yidL	b3680	0.21	+1.5
3,858,497	+	yidL	b3680	0.21	-2.2
3,858,498	+	yidL	b3680	0.21	-1.0
3,858,498	+	yidL	b3680	0.21	-0.1
3,858,498	+	yidL	b3680	0.21	+1.0
3,858,498	+	yidL	b3680	0.21	+1.1
3,858,498	+	yidL	b3680	0.21	+0.3
3,858,498	+	yidL	b3680	0.21	+0.2
3,858,498	+	yidL	b3680	0.21	-0.2
3,858,498	+	yidL	b3680	0.21	+0.0
3,858,498	+	yidL	b3680	0.21	+0.2
3,858,498	+	yidL	b3680	0.21	+2.3
3,858,498	+	yidL	b3680	0.21	-0.5
3,858,500	+	yidL	b3680	0.22	-0.0
3,858,500	+	yidL	b3680	0.22	+0.1
3,858,500	+	yidL	b3680	0.22	+1.4
3,858,500	-	yidL	b3680	0.22	-0.9
3,858,502	+	yidL	b3680	0.22	-0.3
3,858,502	+	yidL	b3680	0.22	+0.5
3,858,506	-	yidL	b3680	0.22	-0.5
3,858,506	-	yidL	b3680	0.22	-2.1
3,858,506	-	yidL	b3680	0.22	-0.6
3,858,507	+	yidL	b3680	0.22	-1.0
3,858,507	+	yidL	b3680	0.22	-1.2
3,858,507	-	yidL	b3680	0.22	+3.3
3,858,510	-	yidL	b3680	0.23	-1.0
3,858,513	-	yidL	b3680	0.23	-0.3
3,858,546	+	yidL	b3680	0.27	+1.2
3,858,546	+	yidL	b3680	0.27	-2.1
3,858,547	+	yidL	b3680	0.27	+1.9
3,858,547	+	yidL	b3680	0.27	+1.1
3,858,553	+	yidL	b3680	0.28	-0.1
3,858,563	-	yidL	b3680	0.29	-1.3
3,858,568	+	yidL	b3680	0.29	-1.1
3,858,599	+	yidL	b3680	0.33	-2.0
3,858,607	-	yidL	b3680	0.34	-1.7
3,858,608	-	yidL	b3680	0.34	-0.1
3,858,627	+	yidL	b3680	0.36	+2.4
3,858,632	+	yidL	b3680	0.36	-1.5
3,858,637	+	yidL	b3680	0.37	+0.8
3,858,645	-	yidL	b3680	0.38	+0.9
3,858,824	+	yidL	b3680	0.58	-0.1
3,858,824	+	yidL	b3680	0.58	-0.6
3,858,824	-	yidL	b3680	0.58	-1.2
3,858,829	-	yidL	b3680	0.59	-0.3
3,858,829	-	yidL	b3680	0.59	-0.3
3,858,833	+	yidL	b3680	0.59	-1.4
3,858,833	+	yidL	b3680	0.59	-0.3
3,858,841	-	yidL	b3680	0.60	+0.1
3,858,890	-	yidL	b3680	0.65	-0.0
3,858,891	+	yidL	b3680	0.65	-0.2
3,858,892	+	yidL	b3680	0.66	-1.1
3,858,892	+	yidL	b3680	0.66	-0.9
3,858,892	+	yidL	b3680	0.66	-0.5
3,858,892	+	yidL	b3680	0.66	-2.3
3,858,892	+	yidL	b3680	0.66	-2.9
3,858,892	+	yidL	b3680	0.66	+3.6
3,858,892	+	yidL	b3680	0.66	-0.9
3,858,900	-	yidL	b3680	0.66	-1.3
3,858,900	-	yidL	b3680	0.66	+0.5
3,858,902	-	yidL	b3680	0.67	-2.5
3,858,902	-	yidL	b3680	0.67	+0.3
3,858,902	-	yidL	b3680	0.67	+0.5
3,858,903	+	yidL	b3680	0.67	-1.1
3,858,903	+	yidL	b3680	0.67	+1.7
3,858,910	-	yidL	b3680	0.68	-1.1
3,858,910	-	yidL	b3680	0.68	+0.9
3,858,910	-	yidL	b3680	0.68	-0.3
3,858,910	-	yidL	b3680	0.68	+1.1
3,858,911	-	yidL	b3680	0.68	-0.9
3,858,911	-	yidL	b3680	0.68	+0.6
3,858,911	-	yidL	b3680	0.68	+0.5
3,858,911	-	yidL	b3680	0.68	-1.1
3,858,911	-	yidL	b3680	0.68	+1.0
3,858,913	+	yidL	b3680	0.68	+0.7
3,858,913	-	yidL	b3680	0.68	+1.2
3,858,913	-	yidL	b3680	0.68	-0.6
3,858,923	-	yidL	b3680	0.69	-0.5
3,858,925	-	yidL	b3680	0.69	+1.0
3,858,931	-	yidL	b3680	0.70	-1.3
3,858,935	+	yidL	b3680	0.70	-0.0
3,858,935	+	yidL	b3680	0.70	+1.3
3,858,935	-	yidL	b3680	0.70	+0.5
3,858,935	-	yidL	b3680	0.70	+1.5
3,858,938	+	yidL	b3680	0.71	-0.8
3,858,945	-	yidL	b3680	0.71	+0.8
3,858,946	-	yidL	b3680	0.72	-1.3
3,858,954	-	yidL	b3680	0.72	+1.5
3,858,956	-	yidL	b3680	0.73	-0.3
3,858,956	-	yidL	b3680	0.73	-0.1
3,858,976	+	yidL	b3680	0.75	+0.1
3,858,976	+	yidL	b3680	0.75	+1.1
3,859,024	-	yidL	b3680	0.80	+1.5
3,859,044	-	yidL	b3680	0.83	+2.4
3,859,044	-	yidL	b3680	0.83	+0.5
3,859,044	-	yidL	b3680	0.83	+0.1
3,859,147	-				-1.1
3,859,147	-				+1.3
3,859,170	+				-0.0
3,859,207	-				+0.3
3,859,207	-				-1.7
3,859,214	-				-1.2
3,859,241	+				-2.3
3,859,246	+				-0.3
3,859,272	-				+1.5
3,859,324	+	glvG	b4556	0.16	-2.6
3,859,342	-	glvG	b4556	0.18	-1.5
3,859,354	-	glvG	b4556	0.19	+0.8
3,859,388	-	glvG	b4556	0.24	-0.6
3,859,406	-	glvG	b4556	0.26	-0.9
3,859,409	-	glvG	b4556	0.26	+0.8
3,859,500	-	glvG	b4556	0.37	-1.1
3,859,503	+	glvG	b4556	0.38	-1.0
3,859,503	+	glvG	b4556	0.38	+1.9
3,859,556	-	glvG	b4556	0.44	-1.4
3,859,570	-	glvG	b4556	0.46	-2.1
3,859,577	-	glvG	b4556	0.47	-1.8
3,859,585	-	glvG	b4556	0.48	+0.5
3,859,591	+	glvG	b4556	0.48	+1.4
3,859,591	+	glvG	b4556	0.48	-0.2
3,859,654	+	glvG	b4556	0.56	-0.5
3,859,662	-	glvG	b4556	0.57	-0.3
3,859,662	-	glvG	b4556	0.57	+0.7
3,859,764	-	glvG	b4556	0.70	-1.0
3,859,813	+	glvG	b4556	0.76	-0.1
3,859,813	+	glvG	b4556	0.76	-0.1
3,859,833	-	glvG	b4556	0.78	-1.5
3,859,850	+	glvG	b4556	0.80	-0.1
3,859,858	-	glvG	b4556	0.81	-0.8
3,859,858	-	glvG	b4556	0.81	-1.3
3,859,922	+	glvG	b4556	0.89	+0.5
3,859,963	-				-0.0
3,859,963	-				+0.7
3,860,074	+				-1.8
3,860,083	-				+1.8
3,860,084	+				-0.6
3,860,099	+				+2.1
3,860,106	-				+0.4
3,860,131	-				+2.1
3,860,135	-				-1.3
3,860,139	+				+0.5
3,860,139	+				-2.4
3,860,198	+	glvC	b3683	0.12	-0.9
3,860,198	+	glvC	b3683	0.12	-0.5
3,860,198	-	glvC	b3683	0.12	+1.5