Strain Fitness in Escherichia coli BW25113 around b3669

Experiment: Cisplatin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.1 mg/ml
3,847,172	-				-0.6
3,847,174	+	uhpB	b3668	0.34	+0.1
3,847,190	+	uhpB	b3668	0.35	-0.9
3,847,203	+	uhpB	b3668	0.36	-0.8
3,847,243	-	uhpB	b3668	0.39	-1.8
3,847,253	-	uhpB	b3668	0.40	+0.2
3,847,264	-	uhpB	b3668	0.40	+3.1
3,847,327	+	uhpB	b3668	0.45	+1.4
3,847,370	+	uhpB	b3668	0.47	-2.0
3,847,422	-	uhpB	b3668	0.51	+2.0
3,847,422	-	uhpB	b3668	0.51	+0.2
3,847,464	+	uhpB	b3668	0.54	+0.6
3,847,480	+	uhpB	b3668	0.55	-0.6
3,847,488	-	uhpB	b3668	0.55	+0.2
3,847,494	-	uhpB	b3668	0.56	-0.1
3,847,516	+	uhpB	b3668	0.57	-1.1
3,847,593	+	uhpB	b3668	0.62	+1.7
3,847,593	+	uhpB	b3668	0.62	+2.4
3,847,665	-	uhpB	b3668	0.67	-0.7
3,847,665	-	uhpB	b3668	0.67	-1.4
3,847,723	-	uhpB	b3668	0.71	-1.4
3,847,815	+	uhpB	b3668	0.77	+1.2
3,847,815	+	uhpB	b3668	0.77	-1.4
3,847,825	-	uhpB	b3668	0.78	+0.2
3,847,825	-	uhpB	b3668	0.78	+1.3
3,847,828	-	uhpB	b3668	0.78	+0.4
3,847,828	-	uhpB	b3668	0.78	-1.1
3,847,880	-	uhpB	b3668	0.81	-0.6
3,847,883	-	uhpB	b3668	0.82	-0.6
3,847,883	-	uhpB	b3668	0.82	+0.7
3,847,942	+	uhpB	b3668	0.85	+0.1
3,848,011	-				-1.1
3,848,016	-				+1.6
3,848,029	-				+1.1
3,848,029	-				+2.7
3,848,043	+				-1.6
3,848,045	+				+0.1
3,848,047	+				-1.6
3,848,074	-				+0.7
3,848,074	-				+0.1
3,848,083	-				-1.1
3,848,094	-				+2.2
3,848,129	+				-0.5
3,848,129	+				+2.6
3,848,163	-				-0.6
3,848,165	+				+1.4
3,848,193	+				+0.3
3,848,193	+				-1.1
3,848,196	-				+0.0
3,848,237	+	uhpA	b3669	0.13	-1.2
3,848,250	-	uhpA	b3669	0.15	-1.0
3,848,261	+	uhpA	b3669	0.17	-2.0
3,848,285	-	uhpA	b3669	0.21	-2.6
3,848,370	-	uhpA	b3669	0.36	+1.4
3,848,439	+	uhpA	b3669	0.47	-1.6
3,848,492	-	uhpA	b3669	0.56	+1.4
3,848,492	-	uhpA	b3669	0.56	-0.6
3,848,494	+	uhpA	b3669	0.57	+0.1
3,848,494	+	uhpA	b3669	0.57	-1.6
3,848,494	+	uhpA	b3669	0.57	-0.4
3,848,494	+	uhpA	b3669	0.57	+1.1
3,848,504	+	uhpA	b3669	0.58	+0.3
3,848,504	+	uhpA	b3669	0.58	+1.4
3,848,524	-	uhpA	b3669	0.62	+1.4
3,848,524	-	uhpA	b3669	0.62	-1.6
3,848,524	-	uhpA	b3669	0.62	-1.1
3,848,526	-	uhpA	b3669	0.62	-2.6
3,848,565	-	uhpA	b3669	0.69	-0.1
3,848,565	-	uhpA	b3669	0.69	-1.1
3,848,571	+	uhpA	b3669	0.70	-0.5
3,848,571	+	uhpA	b3669	0.70	+0.9
3,848,577	+	uhpA	b3669	0.71	+0.1
3,848,585	-	uhpA	b3669	0.72	+0.5
3,848,595	+	uhpA	b3669	0.74	-3.3
3,848,603	-	uhpA	b3669	0.75	+2.6
3,848,608	-	uhpA	b3669	0.76	-0.7
3,848,610	-	uhpA	b3669	0.76	-0.4
3,848,719	+				-0.1
3,848,734	+				-0.5
3,848,904	-	ilvN	b3670	0.27	-0.1
3,848,921	+	ilvN	b3670	0.33	-2.6
3,848,950	+	ilvN	b3670	0.43	+0.0
3,848,953	+	ilvN	b3670	0.44	+1.2
3,848,953	+	ilvN	b3670	0.44	-0.9
3,848,958	-	ilvN	b3670	0.46	+3.0
3,848,958	-	ilvN	b3670	0.46	-1.5
3,848,966	+	ilvN	b3670	0.48	+0.5
3,848,978	+	ilvN	b3670	0.53	+1.0
3,848,978	+	ilvN	b3670	0.53	-0.7
3,848,986	-	ilvN	b3670	0.55	-0.6
3,849,000	-	ilvN	b3670	0.60	+0.4
3,849,000	-	ilvN	b3670	0.60	+1.4
3,849,044	-	ilvN	b3670	0.75	+0.1
3,849,044	-	ilvN	b3670	0.75	-0.7
3,849,044	-	ilvN	b3670	0.75	+1.0
3,849,050	+	ilvN	b3670	0.77	-0.4
3,849,050	+	ilvN	b3670	0.77	-1.1
3,849,055	-	ilvN	b3670	0.79	-1.3
3,849,103	-				+1.9
3,849,103	-				+1.9
3,849,110	-				+0.9
3,849,140	-				-0.7
3,849,193	+				-1.9
3,849,391	-	ilvB	b3671	0.16	-1.1
3,849,404	-	ilvB	b3671	0.17	+1.0
3,849,404	-	ilvB	b3671	0.17	+1.4
3,849,467	-	ilvB	b3671	0.21	+1.6
3,849,485	-	ilvB	b3671	0.22	-1.0
3,849,496	-	ilvB	b3671	0.22	+0.4
3,849,517	+	ilvB	b3671	0.24	+1.3
3,849,568	-	ilvB	b3671	0.27	+0.7
3,849,576	+	ilvB	b3671	0.27	+0.9
3,849,578	+	ilvB	b3671	0.27	-0.8
3,849,598	+	ilvB	b3671	0.28	-1.6
3,849,605	+	ilvB	b3671	0.29	+0.6
3,849,615	+	ilvB	b3671	0.29	-1.5
3,849,617	+	ilvB	b3671	0.29	+0.4
3,849,617	+	ilvB	b3671	0.29	-0.7
3,849,626	+	ilvB	b3671	0.30	+2.8
3,849,636	+	ilvB	b3671	0.31	-1.1