Strain Fitness in Escherichia coli BW25113 around b3422

Experiment: Cisplatin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.1 mg/ml
3,555,394	-	rtcB	b3421	0.42	-0.2
3,555,398	+	rtcB	b3421	0.43	+1.7
3,555,428	+	rtcB	b3421	0.45	+0.8
3,555,428	-	rtcB	b3421	0.45	+1.4
3,555,428	-	rtcB	b3421	0.45	-0.5
3,555,437	+	rtcB	b3421	0.46	+0.4
3,555,447	-	rtcB	b3421	0.47	+1.4
3,555,465	+	rtcB	b3421	0.48	-1.1
3,555,535	+	rtcB	b3421	0.54	-0.2
3,555,552	+	rtcB	b3421	0.55	-1.5
3,555,554	+	rtcB	b3421	0.55	+1.5
3,555,565	-	rtcB	b3421	0.56	-0.7
3,555,565	-	rtcB	b3421	0.56	-0.4
3,555,581	+	rtcB	b3421	0.58	-0.9
3,555,591	+	rtcB	b3421	0.58	+0.8
3,555,591	+	rtcB	b3421	0.58	+0.8
3,555,714	+	rtcB	b3421	0.68	-0.2
3,555,720	-	rtcB	b3421	0.69	+0.8
3,555,749	+	rtcB	b3421	0.71	+0.8
3,555,749	+	rtcB	b3421	0.71	+0.5
3,555,826	-	rtcB	b3421	0.78	-1.1
3,555,826	-	rtcB	b3421	0.78	+3.0
3,555,889	-	rtcB	b3421	0.83	-0.2
3,555,889	-	rtcB	b3421	0.83	-0.8
3,555,926	-	rtcB	b3421	0.86	+1.1
3,555,928	+	rtcB	b3421	0.86	-1.5
3,555,952	+	rtcB	b3421	0.88	+0.9
3,555,957	+	rtcB	b3421	0.88	-0.6
3,555,957	+	rtcB	b3421	0.88	+0.1
3,555,959	-	rtcB	b3421	0.88	-0.7
3,555,959	-	rtcB	b3421	0.88	-2.7
3,555,969	-	rtcB	b3421	0.89	-0.3
3,555,970	-	rtcB	b3421	0.89	+1.2
3,556,030	+				+0.4
3,556,031	+				-1.0
3,556,035	+				+0.5
3,556,035	+				-0.2
3,556,037	+				+2.4
3,556,043	-				+0.1
3,556,043	-				-1.8
3,556,092	-				+0.8
3,556,232	-				-2.5
3,556,232	-				-0.3
3,556,273	+				-1.5
3,556,292	+				-0.9
3,556,292	+				+2.3
3,556,297	+				+0.3
3,556,316	+				+0.1
3,556,326	+				-1.6
3,556,326	+				+3.3
3,556,326	+				-1.4
3,556,326	+				-0.6
3,556,326	+				+0.8
3,556,326	+				+3.0
3,556,334	-				+2.0
3,556,334	-				-0.2
3,556,334	-				+0.1
3,556,334	-				-0.7
3,556,334	-				+1.1
3,556,334	-				+1.7
3,556,358	-				-1.7
3,556,358	-				-0.6
3,556,372	+				+0.4
3,556,372	+				-1.4
3,556,380	-				+0.1
3,556,385	-				+0.4
3,556,392	-				-0.9
3,556,426	-				+1.3
3,556,548	-	rtcR	b3422	0.16	-0.0
3,556,551	+	rtcR	b3422	0.16	+2.0
3,556,731	-	rtcR	b3422	0.28	+0.4
3,556,746	-	rtcR	b3422	0.29	+1.7
3,556,746	-	rtcR	b3422	0.29	-1.6
3,556,858	+	rtcR	b3422	0.36	-1.2
3,556,858	+	rtcR	b3422	0.36	-0.4
3,556,859	+	rtcR	b3422	0.36	-0.9
3,556,933	-	rtcR	b3422	0.40	+0.8
3,556,940	-	rtcR	b3422	0.41	+0.0
3,556,956	+	rtcR	b3422	0.42	+0.0
3,556,973	-	rtcR	b3422	0.43	+1.0
3,556,973	-	rtcR	b3422	0.43	+0.4
3,556,986	-	rtcR	b3422	0.44	+1.9
3,557,003	-	rtcR	b3422	0.45	+1.4
3,557,008	-	rtcR	b3422	0.45	+0.4
3,557,019	+	rtcR	b3422	0.46	+1.7
3,557,029	+	rtcR	b3422	0.46	+2.6
3,557,034	+	rtcR	b3422	0.47	-1.4
3,557,042	-	rtcR	b3422	0.47	-1.2
3,557,042	-	rtcR	b3422	0.47	+1.8
3,557,166	+	rtcR	b3422	0.55	-0.1
3,557,179	-	rtcR	b3422	0.56	-0.1
3,557,179	-	rtcR	b3422	0.56	+1.0
3,557,218	+	rtcR	b3422	0.58	+3.0
3,557,246	+	rtcR	b3422	0.60	+0.1
3,557,246	+	rtcR	b3422	0.60	-0.2
3,557,280	+	rtcR	b3422	0.62	-0.2
3,557,345	+	rtcR	b3422	0.66	+2.0
3,557,345	+	rtcR	b3422	0.66	-0.6
3,557,347	-	rtcR	b3422	0.66	+0.8
3,557,347	-	rtcR	b3422	0.66	-0.5
3,557,368	+	rtcR	b3422	0.67	-1.2
3,557,389	+	rtcR	b3422	0.69	-1.8
3,557,506	-	rtcR	b3422	0.76	+1.1
3,557,560	-	rtcR	b3422	0.79	-0.8
3,557,577	-	rtcR	b3422	0.80	+0.8
3,557,577	-	rtcR	b3422	0.80	-0.2
3,557,583	+	rtcR	b3422	0.81	-1.2
3,557,591	-	rtcR	b3422	0.81	+0.7
3,557,603	-	rtcR	b3422	0.82	+1.0
3,557,621	+	rtcR	b3422	0.83	+2.9
3,557,673	+	rtcR	b3422	0.86	-0.2
3,557,709	-	rtcR	b3422	0.89	+0.1
3,557,709	-	rtcR	b3422	0.89	-1.8
3,557,833	-				-1.7
3,557,849	+				-1.7
3,557,849	+				-2.1
3,557,881	+				-0.6
3,557,884	+				-0.9
3,557,908	-				+2.0
3,557,908	-				+0.4
3,557,948	-	glpR	b3423	0.10	+0.8
3,557,949	+	glpR	b3423	0.10	+1.1
3,557,959	+	glpR	b3423	0.12	+0.1
3,557,968	+	glpR	b3423	0.13	-1.3
3,558,019	+	glpR	b3423	0.20	+0.3
3,558,019	+	glpR	b3423	0.20	-0.8
3,558,069	+	glpR	b3423	0.26	+1.0
3,558,069	+	glpR	b3423	0.26	-1.2
3,558,101	+	glpR	b3423	0.30	-0.4
3,558,103	-	glpR	b3423	0.31	-0.2
3,558,103	-	glpR	b3423	0.31	+0.8
3,558,103	-	glpR	b3423	0.31	-0.1
3,558,104	-	glpR	b3423	0.31	+0.6
3,558,104	-	glpR	b3423	0.31	+0.4
3,558,115	+	glpR	b3423	0.32	+0.1
3,558,143	-	glpR	b3423	0.36	+2.4
3,558,156	-	glpR	b3423	0.38	+1.8
3,558,156	-	glpR	b3423	0.38	+1.4
3,558,221	-	glpR	b3423	0.46	+1.1
3,558,266	+	glpR	b3423	0.52	+2.2
3,558,301	+	glpR	b3423	0.57	+2.6
3,558,309	-	glpR	b3423	0.58	-1.1
3,558,309	-	glpR	b3423	0.58	+0.5
3,558,309	-	glpR	b3423	0.58	-1.5
3,558,309	-	glpR	b3423	0.58	-0.2
3,558,309	-	glpR	b3423	0.58	+2.7
3,558,327	+	glpR	b3423	0.60	-1.0
3,558,364	-	glpR	b3423	0.65	-0.4
3,558,364	-	glpR	b3423	0.65	-0.6
3,558,407	+	glpR	b3423	0.71	+1.4
3,558,409	+	glpR	b3423	0.71	-0.6
3,558,415	+	glpR	b3423	0.72	-0.2
3,558,523	-	glpR	b3423	0.86	-0.4
3,558,572	-				-0.1
3,558,578	+				-1.9
3,558,578	+				-0.2
3,558,588	-				+2.2
3,558,606	+				+0.2
3,558,687	+				-0.5
3,558,753	+	glpG	b3424	0.13	-2.5
3,558,766	+	glpG	b3424	0.15	-0.9
3,558,774	-	glpG	b3424	0.16	+3.2
3,558,776	+	glpG	b3424	0.16	-3.1
3,558,776	+	glpG	b3424	0.16	-0.7
3,558,791	-	glpG	b3424	0.18	-0.7
3,558,794	-	glpG	b3424	0.18	-1.9
3,558,816	-	glpG	b3424	0.21	+1.4
3,558,851	-	glpG	b3424	0.25	-1.6
3,558,855	-	glpG	b3424	0.25	+0.2
3,558,867	-	glpG	b3424	0.27	-1.4
3,558,867	-	glpG	b3424	0.27	-0.2