Strain Fitness in Escherichia coli BW25113 around b3411

Experiment: Cisplatin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.1 mg/ml
3,540,189	+	feoB	b3409	0.76	-0.9
3,540,198	+	feoB	b3409	0.76	-0.7
3,540,198	+	feoB	b3409	0.76	+2.6
3,540,206	-	feoB	b3409	0.77	-0.1
3,540,206	-	feoB	b3409	0.77	+1.1
3,540,206	-	feoB	b3409	0.77	+0.9
3,540,206	-	feoB	b3409	0.77	-0.0
3,540,262	+	feoB	b3409	0.79	+1.1
3,540,265	-	feoB	b3409	0.79	+2.6
3,540,294	-	feoB	b3409	0.80	+0.2
3,540,309	+	feoB	b3409	0.81	+0.5
3,540,314	+	feoB	b3409	0.81	-1.4
3,540,314	+	feoB	b3409	0.81	+0.8
3,540,317	+	feoB	b3409	0.81	+0.2
3,540,322	-	feoB	b3409	0.82	+1.0
3,540,328	-	feoB	b3409	0.82	+1.4
3,540,335	-	feoB	b3409	0.82	-0.7
3,540,372	-	feoB	b3409	0.84	-0.2
3,540,383	+	feoB	b3409	0.84	+0.4
3,540,391	-	feoB	b3409	0.84	+0.9
3,540,418	+	feoB	b3409	0.86	-0.1
3,540,418	+	feoB	b3409	0.86	-0.1
3,540,418	+	feoB	b3409	0.86	-0.6
3,540,418	+	feoB	b3409	0.86	-0.5
3,540,418	+	feoB	b3409	0.86	+1.0
3,540,450	-	feoB	b3409	0.87	+0.5
3,540,473	+	feoB	b3409	0.88	-2.5
3,540,473	+	feoB	b3409	0.88	+0.1
3,540,474	-	feoB	b3409	0.88	+1.4
3,540,474	-	feoB	b3409	0.88	-0.8
3,540,474	-	feoB	b3409	0.88	-1.3
3,540,481	-	feoB	b3409	0.88	-1.5
3,540,501	+	feoB	b3409	0.89	+1.1
3,540,520	-				+1.9
3,540,603	+				-0.2
3,540,603	+				+2.2
3,540,619	+				+0.8
3,540,619	+				+1.4
3,540,633	-				-1.4
3,540,633	-				+2.1
3,540,640	+				-0.0
3,540,676	-				-1.8
3,540,679	-				+0.3
3,540,679	-				-0.8
3,540,796	+	yhgG	b3410	0.19	-1.1
3,540,796	+	yhgG	b3410	0.19	+0.4
3,540,801	-	yhgG	b3410	0.22	+0.2
3,540,804	-	yhgG	b3410	0.23	+0.9
3,540,804	-	yhgG	b3410	0.23	+0.9
3,540,804	-	yhgG	b3410	0.23	-0.2
3,540,824	-	yhgG	b3410	0.31	+0.8
3,540,824	-	yhgG	b3410	0.31	+0.4
3,540,839	+	yhgG	b3410	0.38	-0.3
3,540,840	-	yhgG	b3410	0.38	-2.3
3,540,840	-	yhgG	b3410	0.38	+1.0
3,540,847	-	yhgG	b3410	0.41	+1.4
3,540,847	-	yhgG	b3410	0.41	+4.9
3,540,853	-	yhgG	b3410	0.43	-1.9
3,540,853	-	yhgG	b3410	0.43	-1.8
3,540,878	+	yhgG	b3410	0.54	-0.9
3,540,878	+	yhgG	b3410	0.54	+1.4
3,540,886	-	yhgG	b3410	0.57	-0.2
3,540,886	-	yhgG	b3410	0.57	+1.4
3,540,960	+	yhgG	b3410	0.89	+0.9
3,540,960	+	yhgG	b3410	0.89	-0.7
3,540,975	-				+1.8
3,540,975	-				-1.1
3,540,978	-				-1.9
3,540,980	+				-1.6
3,540,980	+				+0.4
3,540,988	-				+0.8
3,541,024	+				+2.0
3,541,070	+				-0.4
3,541,072	+				+0.2
3,541,091	-				+0.8
3,541,091	-				+0.3
3,541,103	+				+1.6
3,541,135	+				+1.4
3,541,136	+				-0.3
3,541,136	+				-0.8
3,541,136	+				-0.6
3,541,146	-				-0.5
3,541,153	-				-0.7
3,541,248	+				+1.3
3,541,266	-				-1.8
3,541,319	+	yhgA	b3411	0.15	-0.1
3,541,333	-	yhgA	b3411	0.16	+0.5
3,541,340	+	yhgA	b3411	0.17	-1.2
3,541,340	+	yhgA	b3411	0.17	+0.6
3,541,380	+	yhgA	b3411	0.22	+1.2
3,541,380	+	yhgA	b3411	0.22	-1.2
3,541,386	-	yhgA	b3411	0.22	-1.2
3,541,408	+	yhgA	b3411	0.25	-0.8
3,541,428	+	yhgA	b3411	0.27	+1.9
3,541,440	-	yhgA	b3411	0.29	+2.0
3,541,476	+	yhgA	b3411	0.33	+0.3
3,541,484	-	yhgA	b3411	0.34	-0.9
3,541,495	+	yhgA	b3411	0.35	+1.9
3,541,572	+	yhgA	b3411	0.44	-0.6
3,541,577	+	yhgA	b3411	0.44	-0.6
3,541,577	+	yhgA	b3411	0.44	-0.8
3,541,577	+	yhgA	b3411	0.44	-1.6
3,541,581	-	yhgA	b3411	0.45	+3.2
3,541,595	-	yhgA	b3411	0.46	+0.8
3,541,595	-	yhgA	b3411	0.46	-0.1
3,541,643	+	yhgA	b3411	0.52	+0.4
3,541,681	-	yhgA	b3411	0.56	-0.1
3,541,698	+	yhgA	b3411	0.58	+0.5
3,541,701	+	yhgA	b3411	0.58	-0.2
3,541,748	+	yhgA	b3411	0.64	-0.8
3,541,757	+	yhgA	b3411	0.65	-0.2
3,541,788	-	yhgA	b3411	0.68	+1.8
3,541,798	-	yhgA	b3411	0.69	+0.6
3,541,812	+	yhgA	b3411	0.71	+2.3
3,541,812	+	yhgA	b3411	0.71	+0.5
3,541,819	+	yhgA	b3411	0.72	+0.9
3,541,913	+	yhgA	b3411	0.82	+2.5
3,541,963	+	yhgA	b3411	0.88	+0.3
3,541,968	+	yhgA	b3411	0.89	+0.1
3,541,986	-				+1.1
3,541,986	-				+1.0
3,542,095	+				-1.1
3,542,103	-				+1.1
3,542,109	-				-0.9
3,542,115	-				-0.4
3,542,182	-	bioH	b3412	0.11	+1.2
3,542,182	-	bioH	b3412	0.11	+0.4
3,542,236	+	bioH	b3412	0.18	+1.6
3,542,244	-	bioH	b3412	0.19	+0.1
3,542,244	-	bioH	b3412	0.19	-0.8
3,542,244	-	bioH	b3412	0.19	+1.0
3,542,244	-	bioH	b3412	0.19	+1.4
3,542,361	+	bioH	b3412	0.34	-0.2
3,542,361	+	bioH	b3412	0.34	-1.9
3,542,366	+	bioH	b3412	0.35	-2.5
3,542,405	-	bioH	b3412	0.40	-1.1
3,542,441	-	bioH	b3412	0.45	-0.2
3,542,576	+	bioH	b3412	0.62	-0.2
3,542,576	+	bioH	b3412	0.62	-0.8
3,542,580	+	bioH	b3412	0.63	+1.4
3,542,584	+	bioH	b3412	0.63	+0.7
3,542,593	-	bioH	b3412	0.64	-1.8
3,542,692	+	bioH	b3412	0.77	+0.4
3,542,741	-	bioH	b3412	0.84	-0.4
3,542,741	-	bioH	b3412	0.84	+1.5
3,542,767	+	bioH	b3412	0.87	+0.4
3,542,767	+	bioH	b3412	0.87	-0.2
3,542,775	-	bioH	b3412	0.88	-1.8
3,542,775	-	bioH	b3412	0.88	+0.6
3,542,785	-	bioH	b3412	0.89	-0.9
3,542,797	+				+1.4
3,542,797	+				-1.8
3,542,800	-				-0.9
3,542,805	-				-0.2
3,542,805	-				+0.1
3,542,805	-				+0.5
3,542,812	-				-0.9
3,542,826	+				-2.4
3,542,830	+				+0.9
3,542,830	+				+1.1
3,542,893	+				-1.8
3,542,903	+				+0.5
3,542,903	+				+1.2
3,542,953	-				+0.9
3,542,953	-				-0.0
3,542,974	-	yhgH	b3413	0.10	-1.9
3,542,974	-	yhgH	b3413	0.10	-0.1
3,543,006	+	yhgH	b3413	0.15	+1.6
3,543,028	-	yhgH	b3413	0.18	-0.7