Strain Fitness in Escherichia coli BW25113 around b3366

Experiment: Cisplatin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.1 mg/ml
3,493,582	-	nirB	b3365	0.61	+1.1
3,493,591	+	nirB	b3365	0.61	-0.4
3,493,599	-	nirB	b3365	0.62	+2.0
3,493,623	+	nirB	b3365	0.62	-1.7
3,493,623	+	nirB	b3365	0.62	-1.4
3,493,623	+	nirB	b3365	0.62	-1.0
3,493,724	+	nirB	b3365	0.66	+2.0
3,493,779	+	nirB	b3365	0.69	-0.2
3,493,794	-	nirB	b3365	0.69	+1.4
3,493,805	-	nirB	b3365	0.70	-0.3
3,493,805	-	nirB	b3365	0.70	+3.1
3,493,811	+	nirB	b3365	0.70	+1.1
3,493,882	+	nirB	b3365	0.73	+2.8
3,493,882	+	nirB	b3365	0.73	-0.4
3,493,959	+	nirB	b3365	0.76	-0.9
3,493,989	-	nirB	b3365	0.77	+1.4
3,494,041	-	nirB	b3365	0.79	+0.8
3,494,107	-	nirB	b3365	0.82	+2.4
3,494,107	-	nirB	b3365	0.82	-1.9
3,494,247	+	nirB	b3365	0.87	-0.6
3,494,347	+				+0.4
3,494,395	+				+1.9
3,494,434	+				-0.9
3,494,434	+				-0.6
3,494,452	-				-0.7
3,494,459	+				-1.2
3,494,488	+				+0.1
3,494,499	-				+0.3
3,494,499	-				-0.8
3,494,507	-				-0.2
3,494,507	-				+1.6
3,494,507	-				-1.9
3,494,540	-				+0.4
3,494,548	+				-2.3
3,494,564	-				+1.4
3,494,577	-				-0.4
3,494,577	-				-1.2
3,494,646	-	nirD	b3366	0.22	+1.0
3,494,742	-	nirD	b3366	0.52	-0.4
3,494,760	+	nirD	b3366	0.57	-1.8
3,494,765	+	nirD	b3366	0.59	+2.1
3,494,765	+	nirD	b3366	0.59	+2.7
3,494,765	+	nirD	b3366	0.59	-0.6
3,494,779	-	nirD	b3366	0.63	+2.2
3,494,888	-				+1.7
3,494,888	-				-0.8
3,494,939	+				-0.6
3,494,939	+				+0.4
3,494,947	-				-1.5
3,494,947	-				+1.2
3,495,048	+				-1.3
3,495,056	-				-0.9
3,495,062	-				-0.6
3,495,071	+				+3.3
3,495,079	-				+0.8
3,495,113	+	nirC	b3367	0.11	+4.2
3,495,113	+	nirC	b3367	0.11	-0.2
3,495,123	+	nirC	b3367	0.12	-1.2
3,495,124	-	nirC	b3367	0.12	-0.6
3,495,124	-	nirC	b3367	0.12	+1.1
3,495,129	+	nirC	b3367	0.13	-0.3
3,495,129	+	nirC	b3367	0.13	+0.4
3,495,131	+	nirC	b3367	0.13	-0.7
3,495,148	-	nirC	b3367	0.15	-1.4
3,495,148	-	nirC	b3367	0.15	+3.8
3,495,148	-	nirC	b3367	0.15	-2.0
3,495,148	-	nirC	b3367	0.15	+0.8
3,495,182	+	nirC	b3367	0.19	+0.8
3,495,195	-	nirC	b3367	0.21	+0.3
3,495,197	+	nirC	b3367	0.21	+2.9
3,495,197	+	nirC	b3367	0.21	+2.0
3,495,251	+	nirC	b3367	0.28	-2.8
3,495,251	+	nirC	b3367	0.28	-1.0
3,495,251	+	nirC	b3367	0.28	+1.4
3,495,259	-	nirC	b3367	0.29	+0.2
3,495,271	-	nirC	b3367	0.30	+1.9
3,495,308	+	nirC	b3367	0.35	-0.2
3,495,308	+	nirC	b3367	0.35	-1.1
3,495,311	-	nirC	b3367	0.35	-2.3
3,495,311	-	nirC	b3367	0.35	-1.4
3,495,353	-	nirC	b3367	0.41	-1.2
3,495,358	+	nirC	b3367	0.41	-0.4
3,495,388	+	nirC	b3367	0.45	-2.4
3,495,388	+	nirC	b3367	0.45	-0.4
3,495,388	+	nirC	b3367	0.45	-0.2
3,495,388	+	nirC	b3367	0.45	-1.4
3,495,388	+	nirC	b3367	0.45	+0.9
3,495,396	-	nirC	b3367	0.46	-2.2
3,495,491	+	nirC	b3367	0.58	-0.7
3,495,535	+	nirC	b3367	0.63	-1.0
3,495,579	-	nirC	b3367	0.69	+1.0
3,495,609	+	nirC	b3367	0.72	+0.4
3,495,623	-	nirC	b3367	0.74	+1.4
3,495,623	-	nirC	b3367	0.74	+0.8
3,495,626	+	nirC	b3367	0.74	+2.3
3,495,626	+	nirC	b3367	0.74	+1.7
3,495,645	+	nirC	b3367	0.77	+1.3
3,495,645	+	nirC	b3367	0.77	+0.6
3,495,653	+	nirC	b3367	0.78	+2.7
3,495,654	-	nirC	b3367	0.78	+2.8
3,495,678	-	nirC	b3367	0.81	+0.4
3,495,678	-	nirC	b3367	0.81	-0.2
3,495,702	+	nirC	b3367	0.84	+0.3
3,495,705	-	nirC	b3367	0.84	-1.7
3,495,710	-	nirC	b3367	0.85	-2.4
3,495,715	-	nirC	b3367	0.86	-1.0
3,495,717	+	nirC	b3367	0.86	-0.3
3,495,744	-	nirC	b3367	0.89	-1.1
3,495,832	-				-0.6
3,495,893	+				-1.2