Strain Fitness in Escherichia coli BW25113 around b2738
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,860,657 | + | ygbK | b2737 | 0.26 | -0.7 |
2,860,721 | + | ygbK | b2737 | 0.31 | -1.3 |
2,860,847 | - | ygbK | b2737 | 0.42 | -0.7 |
2,860,851 | + | ygbK | b2737 | 0.42 | +0.9 |
2,860,895 | - | ygbK | b2737 | 0.46 | +1.6 |
2,860,990 | + | ygbK | b2737 | 0.54 | -0.7 |
2,860,990 | + | ygbK | b2737 | 0.54 | +2.2 |
2,860,997 | + | ygbK | b2737 | 0.55 | -0.3 |
2,860,998 | - | ygbK | b2737 | 0.55 | +0.5 |
2,861,029 | - | ygbK | b2737 | 0.58 | -1.2 |
2,861,044 | + | ygbK | b2737 | 0.59 | -1.0 |
2,861,044 | + | ygbK | b2737 | 0.59 | +1.7 |
2,861,080 | + | ygbK | b2737 | 0.62 | -0.4 |
2,861,111 | + | ygbK | b2737 | 0.65 | -0.3 |
2,861,166 | - | ygbK | b2737 | 0.69 | +2.6 |
2,861,195 | + | ygbK | b2737 | 0.72 | -2.2 |
2,861,301 | + | ygbK | b2737 | 0.81 | +0.3 |
2,861,301 | + | ygbK | b2737 | 0.81 | -0.7 |
2,861,518 | + | -0.1 | |||
2,861,531 | + | +0.3 | |||
2,861,531 | + | +0.1 | |||
2,861,539 | - | -1.2 | |||
2,861,539 | - | -0.4 | |||
2,861,551 | + | -0.5 | |||
2,861,602 | - | -0.7 | |||
2,861,614 | - | -0.3 | |||
2,861,614 | - | +1.9 | |||
2,861,719 | - | ygbL | b2738 | 0.16 | +0.6 |
2,861,766 | - | ygbL | b2738 | 0.24 | -0.9 |
2,861,778 | + | ygbL | b2738 | 0.26 | +1.4 |
2,861,778 | + | ygbL | b2738 | 0.26 | -2.4 |
2,861,832 | + | ygbL | b2738 | 0.34 | +0.1 |
2,861,924 | - | ygbL | b2738 | 0.48 | +2.8 |
2,861,984 | - | ygbL | b2738 | 0.58 | +3.1 |
2,862,001 | + | ygbL | b2738 | 0.60 | -1.0 |
2,862,001 | + | ygbL | b2738 | 0.60 | -0.9 |
2,862,384 | - | ygbM | b2739 | 0.16 | +0.8 |
2,862,439 | - | ygbM | b2739 | 0.23 | -0.1 |
2,862,439 | - | ygbM | b2739 | 0.23 | +0.2 |
2,862,479 | - | ygbM | b2739 | 0.28 | -0.0 |
2,862,511 | - | ygbM | b2739 | 0.33 | -1.0 |
2,862,531 | + | ygbM | b2739 | 0.35 | +0.6 |
2,862,569 | - | ygbM | b2739 | 0.40 | -0.5 |
2,862,569 | - | ygbM | b2739 | 0.40 | +0.3 |
2,862,598 | + | ygbM | b2739 | 0.44 | -0.7 |
2,862,608 | + | ygbM | b2739 | 0.45 | -0.7 |
2,862,660 | - | ygbM | b2739 | 0.52 | +0.3 |
2,862,695 | - | ygbM | b2739 | 0.56 | -0.0 |
2,862,708 | - | ygbM | b2739 | 0.58 | +0.0 |
2,862,741 | - | ygbM | b2739 | 0.62 | -0.7 |
2,862,743 | + | ygbM | b2739 | 0.62 | -2.0 |
2,862,743 | + | ygbM | b2739 | 0.62 | -0.3 |
2,862,753 | - | ygbM | b2739 | 0.64 | +0.2 |
2,862,756 | - | ygbM | b2739 | 0.64 | +1.9 |
2,862,767 | + | ygbM | b2739 | 0.66 | +1.1 |
2,862,775 | - | ygbM | b2739 | 0.67 | +2.3 |
2,862,775 | - | ygbM | b2739 | 0.67 | -1.0 |
2,862,898 | - | ygbM | b2739 | 0.82 | -0.3 |
2,862,903 | - | ygbM | b2739 | 0.83 | -0.7 |
2,862,903 | - | ygbM | b2739 | 0.83 | -1.2 |
2,862,936 | - | ygbM | b2739 | 0.87 | -1.4 |
2,862,947 | + | ygbM | b2739 | 0.89 | +0.7 |
2,862,947 | + | ygbM | b2739 | 0.89 | -1.3 |
2,862,967 | - | +1.1 | |||
2,862,997 | + | +0.8 | |||
2,863,069 | - | +0.4 | |||
2,863,084 | - | -2.3 | |||
2,863,114 | + | -0.4 | |||
2,863,140 | + | +0.5 |
Or see this region's nucleotide sequence