Strain Fitness in Escherichia coli BW25113 around b2704
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,824,412 | - | +1.4 | |||
2,824,412 | - | +2.5 | |||
2,824,460 | + | +0.0 | |||
2,824,683 | - | srlE | b2703 | 0.28 | +1.4 |
2,824,736 | - | srlE | b2703 | 0.34 | +0.9 |
2,824,775 | + | srlE | b2703 | 0.38 | -0.2 |
2,824,933 | - | srlE | b2703 | 0.54 | -1.6 |
2,824,938 | - | srlE | b2703 | 0.55 | -0.2 |
2,824,938 | - | srlE | b2703 | 0.55 | +3.2 |
2,824,969 | + | srlE | b2703 | 0.58 | +1.0 |
2,824,969 | + | srlE | b2703 | 0.58 | -0.6 |
2,824,983 | + | srlE | b2703 | 0.59 | -0.6 |
2,824,983 | + | srlE | b2703 | 0.59 | +0.4 |
2,825,009 | + | srlE | b2703 | 0.62 | +0.9 |
2,825,113 | - | srlE | b2703 | 0.73 | +1.8 |
2,825,179 | + | srlE | b2703 | 0.80 | -2.6 |
2,825,263 | + | srlE | b2703 | 0.88 | +1.4 |
2,825,263 | + | srlE | b2703 | 0.88 | -1.2 |
2,825,296 | + | +0.4 | |||
2,825,569 | + | srlB | b2704 | 0.50 | -2.3 |
2,825,599 | - | srlB | b2704 | 0.58 | +0.4 |
2,825,631 | + | srlB | b2704 | 0.66 | +1.4 |
2,825,631 | + | srlB | b2704 | 0.66 | +1.4 |
2,825,641 | + | srlB | b2704 | 0.69 | +0.1 |
2,825,689 | - | srlB | b2704 | 0.82 | -0.5 |
2,825,709 | + | srlB | b2704 | 0.87 | -0.6 |
2,825,734 | + | +2.7 | |||
2,825,807 | + | +0.4 | |||
2,825,921 | - | srlD | b2705 | 0.21 | -1.2 |
2,825,949 | - | srlD | b2705 | 0.24 | -1.3 |
2,825,949 | - | srlD | b2705 | 0.24 | -0.6 |
2,825,973 | + | srlD | b2705 | 0.27 | -0.3 |
2,826,044 | - | srlD | b2705 | 0.37 | +1.2 |
2,826,210 | + | srlD | b2705 | 0.58 | +3.3 |
2,826,210 | + | srlD | b2705 | 0.58 | -0.4 |
2,826,215 | + | srlD | b2705 | 0.58 | -1.9 |
2,826,218 | - | srlD | b2705 | 0.59 | +2.4 |
2,826,218 | - | srlD | b2705 | 0.59 | +3.1 |
2,826,245 | + | srlD | b2705 | 0.62 | +2.0 |
2,826,318 | - | srlD | b2705 | 0.72 | -0.6 |
2,826,397 | + | srlD | b2705 | 0.82 | +0.4 |
2,826,397 | + | srlD | b2705 | 0.82 | +2.1 |
2,826,397 | + | srlD | b2705 | 0.82 | +1.7 |
2,826,397 | + | srlD | b2705 | 0.82 | -1.8 |
2,826,474 | + | +1.3 | |||
2,826,474 | + | +1.9 | |||
2,826,482 | - | +2.1 | |||
2,826,490 | - | -0.4 | |||
2,826,490 | - | +2.1 | |||
2,826,613 | - | -1.1 | |||
2,826,613 | - | -0.6 | |||
2,826,613 | - | +1.4 | |||
2,826,646 | - | +3.1 |
Or see this region's nucleotide sequence