Strain Fitness in Escherichia coli BW25113 around b2667

Experiment: Cisplatin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.1 mg/ml
2,794,239	+	ygaE	b2664	0.82	+0.7
2,794,239	+	ygaE	b2664	0.82	-0.5
2,794,271	+	ygaE	b2664	0.87	-1.9
2,794,299	+				+0.3
2,794,372	-				-1.5
2,794,372	-				+0.3
2,794,418	-	ygaU	b2665	0.13	-1.0
2,794,462	+	ygaU	b2665	0.23	+1.2
2,794,469	-	ygaU	b2665	0.24	-0.8
2,794,480	-	ygaU	b2665	0.27	-1.6
2,794,518	-	ygaU	b2665	0.35	-0.2
2,794,554	+	ygaU	b2665	0.43	-0.3
2,794,554	+	ygaU	b2665	0.43	-0.5
2,794,562	-	ygaU	b2665	0.45	+1.5
2,794,623	-	ygaU	b2665	0.59	-2.0
2,794,623	-	ygaU	b2665	0.59	-1.3
2,794,628	+	ygaU	b2665	0.60	-0.8
2,794,712	+	ygaU	b2665	0.78	+0.2
2,794,758	-	ygaU	b2665	0.89	-1.5
2,794,758	-	ygaU	b2665	0.89	+0.3
2,794,808	+				-2.2
2,794,812	-				+0.9
2,794,835	-				-0.3
2,794,835	-				+0.2
2,794,851	+				-0.3
2,794,851	+				-1.8
2,794,877	+				+0.9
2,794,880	-				+1.5
2,794,880	-				-2.2
2,794,887	-				-0.7
2,794,887	-				+0.3
2,794,892	-				+1.5
2,794,892	-				+0.7
2,794,985	+	yqaE	b2666	0.58	-0.2
2,794,987	-	yqaE	b2666	0.60	-0.2
2,794,997	+	yqaE	b2666	0.66	-1.5
2,794,997	-	yqaE	b2666	0.66	+2.3
2,795,054	-				+0.3
2,795,054	-				+0.3
2,795,066	-				+0.5
2,795,066	-				+1.9
2,795,154	-				+1.0
2,795,289	-	ygaV	b2667	0.19	-1.6
2,795,295	+	ygaV	b2667	0.21	+5.9
2,795,330	-	ygaV	b2667	0.32	-1.0
2,795,372	+	ygaV	b2667	0.46	+2.1
2,795,374	+	ygaV	b2667	0.47	-1.0
2,795,380	-	ygaV	b2667	0.49	+0.3
2,795,380	-	ygaV	b2667	0.49	+3.8
2,795,384	+	ygaV	b2667	0.50	+1.0
2,795,386	-	ygaV	b2667	0.51	+0.1
2,795,388	+	ygaV	b2667	0.52	-0.5
2,795,390	-	ygaV	b2667	0.52	-0.6
2,795,401	-	ygaV	b2667	0.56	+1.3
2,795,409	+	ygaV	b2667	0.59	-2.4
2,795,413	+	ygaV	b2667	0.60	+2.5
2,795,423	+	ygaV	b2667	0.63	-2.7
2,795,423	+	ygaV	b2667	0.63	+0.2
2,795,431	+	ygaV	b2667	0.66	-0.6
2,795,434	+	ygaV	b2667	0.67	+0.2
2,795,437	-	ygaV	b2667	0.68	+0.8
2,795,439	+	ygaV	b2667	0.69	-1.7
2,795,439	+	ygaV	b2667	0.69	-0.6
2,795,441	+	ygaV	b2667	0.69	-0.7
2,795,449	-	ygaV	b2667	0.72	+0.7
2,795,449	-	ygaV	b2667	0.72	-0.6
2,795,449	-	ygaV	b2667	0.72	-0.8
2,795,449	-	ygaV	b2667	0.72	-0.3
2,795,449	-	ygaV	b2667	0.72	-0.7
2,795,450	-	ygaV	b2667	0.72	-2.0
2,795,458	-	ygaV	b2667	0.75	-2.8
2,795,460	-	ygaV	b2667	0.76	-1.5
2,795,460	-	ygaV	b2667	0.76	-0.6
2,795,460	-	ygaV	b2667	0.76	-1.1
2,795,497	+	ygaV	b2667	0.88	-0.2
2,795,497	+	ygaV	b2667	0.88	-2.3
2,795,508	+				+0.8
2,795,522	+				+2.6
2,795,522	+				-1.2
2,795,527	-				-0.0
2,795,527	-				-0.0
2,795,534	+				-0.7
2,795,534	+				-0.1
2,795,534	-				-1.3
2,795,534	-				-0.3
2,795,536	+				+1.5
2,795,539	+				-0.6
2,795,540	+				+0.1
2,795,542	-				+3.5
2,795,646	+	ygaP	b2668	0.20	-2.5
2,795,665	+	ygaP	b2668	0.23	+0.9
2,795,665	+	ygaP	b2668	0.23	-0.3
2,795,703	+	ygaP	b2668	0.31	-1.3
2,795,703	+	ygaP	b2668	0.31	-1.5
2,795,727	+	ygaP	b2668	0.35	-0.7
2,795,727	+	ygaP	b2668	0.35	+1.6
2,795,733	-	ygaP	b2668	0.36	-0.0
2,795,740	+	ygaP	b2668	0.38	+2.3
2,795,748	+	ygaP	b2668	0.39	+0.9
2,795,758	-	ygaP	b2668	0.41	-0.9
2,795,779	+	ygaP	b2668	0.45	-2.2
2,795,806	+	ygaP	b2668	0.50	+0.7
2,795,818	+	ygaP	b2668	0.53	+2.1
2,795,924	+	ygaP	b2668	0.73	+2.2
2,795,924	+	ygaP	b2668	0.73	-2.7
2,795,929	+	ygaP	b2668	0.74	+0.5
2,795,929	+	ygaP	b2668	0.74	-1.7
2,795,939	+	ygaP	b2668	0.76	+0.2
2,795,966	-	ygaP	b2668	0.81	-1.3
2,795,966	-	ygaP	b2668	0.81	+1.3
2,795,994	-	ygaP	b2668	0.86	+2.6
2,795,994	-	ygaP	b2668	0.86	-0.8
2,795,994	-	ygaP	b2668	0.86	-0.0
2,796,091	-				-1.0
2,796,097	+				-0.1
2,796,104	-				-0.5
2,796,104	-				+1.3
2,796,162	+	stpA	b2669	0.12	-2.2
2,796,172	+	stpA	b2669	0.15	+0.1
2,796,172	+	stpA	b2669	0.15	-1.3
2,796,174	+	stpA	b2669	0.15	+1.3
2,796,174	+	stpA	b2669	0.15	-0.0
2,796,174	+	stpA	b2669	0.15	+3.1
2,796,174	+	stpA	b2669	0.15	-0.0
2,796,178	+	stpA	b2669	0.16	+1.3
2,796,178	+	stpA	b2669	0.16	-0.5
2,796,178	+	stpA	b2669	0.16	+0.7
2,796,179	+	stpA	b2669	0.16	+0.3
2,796,179	+	stpA	b2669	0.16	-2.3
2,796,180	-	stpA	b2669	0.17	-1.5
2,796,180	-	stpA	b2669	0.17	+0.5
2,796,180	-	stpA	b2669	0.17	+0.8
2,796,180	-	stpA	b2669	0.17	+1.8
2,796,180	-	stpA	b2669	0.17	+2.7
2,796,180	-	stpA	b2669	0.17	-1.4
2,796,182	-	stpA	b2669	0.17	+1.7
2,796,182	-	stpA	b2669	0.17	+0.3
2,796,182	-	stpA	b2669	0.17	-1.0
2,796,182	-	stpA	b2669	0.17	+0.3
2,796,182	-	stpA	b2669	0.17	-1.0
2,796,182	-	stpA	b2669	0.17	-0.5
2,796,182	-	stpA	b2669	0.17	+0.4
2,796,182	-	stpA	b2669	0.17	+0.1
2,796,189	+	stpA	b2669	0.19	-0.3
2,796,197	-	stpA	b2669	0.21	+2.6
2,796,197	-	stpA	b2669	0.21	+1.3
2,796,201	-	stpA	b2669	0.22	-1.2
2,796,202	-	stpA	b2669	0.22	+1.0
2,796,203	-	stpA	b2669	0.22	+2.1
2,796,215	-	stpA	b2669	0.25	+1.3
2,796,215	-	stpA	b2669	0.25	+2.3
2,796,215	-	stpA	b2669	0.25	-1.5
2,796,266	+	stpA	b2669	0.38	-1.0
2,796,271	-	stpA	b2669	0.39	+0.3
2,796,271	-	stpA	b2669	0.39	+0.1
2,796,271	-	stpA	b2669	0.39	+1.0
2,796,276	-	stpA	b2669	0.40	+1.0
2,796,276	-	stpA	b2669	0.40	-0.0
2,796,276	-	stpA	b2669	0.40	+1.5
2,796,279	+	stpA	b2669	0.41	-1.4
2,796,281	-	stpA	b2669	0.41	-2.0
2,796,281	-	stpA	b2669	0.41	+1.1
2,796,290	-	stpA	b2669	0.44	+0.1
2,796,290	-	stpA	b2669	0.44	-1.3
2,796,326	-	stpA	b2669	0.53	-1.9
2,796,326	-	stpA	b2669	0.53	+1.2
2,796,326	-	stpA	b2669	0.53	+0.9
2,796,326	-	stpA	b2669	0.53	+0.5
2,796,326	-	stpA	b2669	0.53	-1.5
2,796,329	-	stpA	b2669	0.53	-0.3
2,796,331	+	stpA	b2669	0.54	-0.9
2,796,336	-	stpA	b2669	0.55	-1.3
2,796,336	-	stpA	b2669	0.55	+0.3
2,796,336	-	stpA	b2669	0.55	+0.3
2,796,336	-	stpA	b2669	0.55	+0.9
2,796,339	-	stpA	b2669	0.56	+1.0
2,796,364	-	stpA	b2669	0.62	-0.7
2,796,364	-	stpA	b2669	0.62	-2.2
2,796,365	-	stpA	b2669	0.62	-0.0
2,796,365	-	stpA	b2669	0.62	+0.3
2,796,369	-	stpA	b2669	0.63	-1.7
2,796,374	-	stpA	b2669	0.64	-0.3
2,796,375	-	stpA	b2669	0.65	+2.6
2,796,375	-	stpA	b2669	0.65	+0.7
2,796,376	+	stpA	b2669	0.65	-0.7
2,796,385	-	stpA	b2669	0.67	+0.5
2,796,394	-	stpA	b2669	0.69	-0.8
2,796,406	-	stpA	b2669	0.72	+0.3
2,796,407	+	stpA	b2669	0.73	+0.6
2,796,407	+	stpA	b2669	0.73	+2.2
2,796,442	-	stpA	b2669	0.81	-2.1
2,796,443	+	stpA	b2669	0.81	-2.5
2,796,452	-	stpA	b2669	0.84	+0.3
2,796,452	-	stpA	b2669	0.84	-0.1
2,796,474	-	stpA	b2669	0.89	+1.7
2,796,488	-				-1.7
2,796,488	-				+1.9