Strain Fitness in Escherichia coli BW25113 around b2550
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,680,055 | + | yphG | b2549 | 0.78 | -0.2 |
| 2,680,083 | + | yphG | b2549 | 0.79 | -2.3 |
| 2,680,346 | - | yphG | b2549 | 0.87 | -0.3 |
| 2,680,346 | - | yphG | b2549 | 0.87 | +0.3 |
| 2,680,348 | + | yphG | b2549 | 0.87 | +0.4 |
| 2,680,403 | - | yphG | b2549 | 0.89 | +0.3 |
| 2,680,459 | - | -2.2 | |||
| 2,680,459 | - | +0.3 | |||
| 2,680,626 | - | +2.9 | |||
| 2,680,626 | - | -2.3 | |||
| 2,680,788 | + | +1.0 | |||
| 2,681,096 | + | yphH | b2550 | 0.18 | -0.1 |
| 2,681,096 | + | yphH | b2550 | 0.18 | -0.5 |
| 2,681,099 | + | yphH | b2550 | 0.18 | +0.5 |
| 2,681,176 | + | yphH | b2550 | 0.24 | -0.2 |
| 2,681,316 | - | yphH | b2550 | 0.36 | +0.8 |
| 2,681,433 | + | yphH | b2550 | 0.46 | +1.0 |
| 2,681,433 | + | yphH | b2550 | 0.46 | -2.2 |
| 2,681,440 | + | yphH | b2550 | 0.46 | -0.5 |
| 2,681,612 | - | yphH | b2550 | 0.61 | +0.6 |
| 2,681,629 | + | yphH | b2550 | 0.62 | +0.2 |
| 2,681,726 | - | yphH | b2550 | 0.70 | -0.3 |
| 2,681,771 | - | yphH | b2550 | 0.74 | -0.5 |
| 2,681,938 | - | yphH | b2550 | 0.88 | +0.2 |
| 2,681,938 | - | yphH | b2550 | 0.88 | -0.5 |
| 2,682,052 | - | -2.2 | |||
| 2,682,121 | - | +0.3 |
Or see this region's nucleotide sequence