Strain Fitness in Escherichia coli BW25113 around b2496
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,615,356 | - | yfgC | b2494 | 0.85 | -1.3 |
2,615,392 | - | yfgC | b2494 | 0.87 | -1.7 |
2,615,403 | - | yfgC | b2494 | 0.88 | +1.1 |
2,615,463 | - | +1.0 | |||
2,615,463 | - | +2.7 | |||
2,615,470 | + | -0.2 | |||
2,615,470 | - | +0.1 | |||
2,615,470 | - | -0.9 | |||
2,615,719 | - | yfgD | b2495 | 0.33 | -1.4 |
2,615,756 | + | yfgD | b2495 | 0.43 | +0.5 |
2,615,766 | - | yfgD | b2495 | 0.46 | -1.2 |
2,615,766 | - | yfgD | b2495 | 0.46 | -1.0 |
2,615,826 | - | yfgD | b2495 | 0.63 | +1.3 |
2,615,826 | - | yfgD | b2495 | 0.63 | +1.3 |
2,615,826 | - | yfgD | b2495 | 0.63 | -0.8 |
2,615,826 | - | yfgD | b2495 | 0.63 | +0.5 |
2,615,857 | - | yfgD | b2495 | 0.71 | +0.3 |
2,615,857 | - | yfgD | b2495 | 0.71 | -1.0 |
2,615,898 | - | yfgD | b2495 | 0.83 | -2.4 |
2,615,953 | - | -0.3 | |||
2,615,966 | - | -0.9 | |||
2,616,025 | + | +1.1 | |||
2,616,867 | + | +0.8 | |||
2,616,867 | + | -0.9 | |||
2,616,869 | + | -0.3 | |||
2,616,955 | - | -0.7 | |||
2,616,955 | - | -0.7 | |||
2,617,019 | - | +1.0 | |||
2,617,096 | - | uraA | b2497 | 0.16 | +2.0 |
2,617,336 | - | uraA | b2497 | 0.34 | -2.4 |
2,617,346 | - | uraA | b2497 | 0.35 | -0.6 |
2,617,391 | + | uraA | b2497 | 0.39 | -0.3 |
2,617,399 | - | uraA | b2497 | 0.39 | +0.3 |
2,617,399 | - | uraA | b2497 | 0.39 | -0.7 |
2,617,404 | - | uraA | b2497 | 0.40 | -0.0 |
2,617,436 | - | uraA | b2497 | 0.42 | +0.4 |
2,617,492 | - | uraA | b2497 | 0.46 | +3.5 |
2,617,572 | + | uraA | b2497 | 0.53 | +0.0 |
2,617,675 | - | uraA | b2497 | 0.61 | +0.1 |
2,617,675 | - | uraA | b2497 | 0.61 | -0.1 |
2,617,690 | + | uraA | b2497 | 0.62 | -1.7 |
2,617,695 | + | uraA | b2497 | 0.62 | +0.5 |
Or see this region's nucleotide sequence