Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt b2246 and yfaW are separated by 56 nucleotides yfaW and yfaX are separated by 14 nucleotides
b2246: b2246 - putative transport protein (VIMSS), at 2,356,885 to 2,358,174
b2246
b2247: yfaW - predicted enolase (RefSeq), at 2,358,231 to 2,359,436
yfaW
b2248: yfaX - predicted DNA-binding transcriptional regulator (NCBI), at 2,359,451 to 2,360,233
yfaX
Position (kb)
2358
2359
2360 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2357.297 kb on - strand, within b2246 at 2357.335 kb on + strand, within b2246 at 2357.343 kb on - strand, within b2246 at 2357.576 kb on - strand, within b2246 at 2357.612 kb on - strand, within b2246 at 2357.743 kb on - strand, within b2246 at 2357.748 kb on - strand, within b2246 at 2357.748 kb on - strand, within b2246 at 2357.840 kb on - strand, within b2246 at 2357.840 kb on - strand, within b2246 at 2357.878 kb on + strand, within b2246 at 2357.878 kb on + strand, within b2246 at 2357.980 kb on - strand, within b2246 at 2358.090 kb on - strand at 2358.227 kb on - strand at 2358.227 kb on - strand at 2358.238 kb on + strand at 2358.238 kb on + strand at 2358.238 kb on - strand at 2358.434 kb on - strand, within yfaW at 2358.478 kb on - strand, within yfaW at 2358.589 kb on + strand, within yfaW at 2358.591 kb on + strand, within yfaW at 2358.674 kb on + strand, within yfaW at 2358.707 kb on + strand, within yfaW at 2358.865 kb on + strand, within yfaW at 2358.870 kb on - strand, within yfaW at 2358.899 kb on - strand, within yfaW at 2359.027 kb on - strand, within yfaW at 2359.077 kb on - strand, within yfaW at 2359.077 kb on - strand, within yfaW at 2359.077 kb on - strand, within yfaW at 2359.079 kb on - strand, within yfaW at 2359.109 kb on + strand, within yfaW at 2359.128 kb on - strand, within yfaW at 2359.144 kb on - strand, within yfaW at 2359.226 kb on + strand, within yfaW at 2359.226 kb on + strand, within yfaW at 2359.230 kb on - strand, within yfaW at 2359.439 kb on - strand at 2359.439 kb on - strand at 2359.442 kb on + strand at 2359.442 kb on + strand at 2359.482 kb on - strand at 2359.514 kb on + strand at 2359.514 kb on + strand at 2359.686 kb on - strand, within yfaX at 2359.778 kb on + strand, within yfaX at 2359.778 kb on + strand, within yfaX at 2359.907 kb on + strand, within yfaX at 2360.320 kb on - strand at 2360.320 kb on - strand at 2360.432 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.1 mg/ml remove 2,357,297 - b2246 b2246 0.32 +1.8 2,357,335 + b2246 b2246 0.35 -1.1 2,357,343 - b2246 b2246 0.36 +1.2 2,357,576 - b2246 b2246 0.54 -1.1 2,357,612 - b2246 b2246 0.56 +1.9 2,357,743 - b2246 b2246 0.67 -1.8 2,357,748 - b2246 b2246 0.67 +0.8 2,357,748 - b2246 b2246 0.67 +1.2 2,357,840 - b2246 b2246 0.74 -2.3 2,357,840 - b2246 b2246 0.74 -0.5 2,357,878 + b2246 b2246 0.77 +0.4 2,357,878 + b2246 b2246 0.77 -1.1 2,357,980 - b2246 b2246 0.85 +3.2 2,358,090 - +0.8 2,358,227 - +1.2 2,358,227 - +0.6 2,358,238 + -0.1 2,358,238 + -0.1 2,358,238 - -2.0 2,358,434 - yfaW b2247 0.17 -1.8 2,358,478 - yfaW b2247 0.20 -1.6 2,358,589 + yfaW b2247 0.30 +0.4 2,358,591 + yfaW b2247 0.30 +1.2 2,358,674 + yfaW b2247 0.37 -2.0 2,358,707 + yfaW b2247 0.39 +0.8 2,358,865 + yfaW b2247 0.53 -1.8 2,358,870 - yfaW b2247 0.53 -1.8 2,358,899 - yfaW b2247 0.55 -3.7 2,359,027 - yfaW b2247 0.66 -2.4 2,359,077 - yfaW b2247 0.70 -0.4 2,359,077 - yfaW b2247 0.70 -3.5 2,359,077 - yfaW b2247 0.70 +0.2 2,359,079 - yfaW b2247 0.70 -1.1 2,359,109 + yfaW b2247 0.73 +2.3 2,359,128 - yfaW b2247 0.74 -1.7 2,359,144 - yfaW b2247 0.76 -1.0 2,359,226 + yfaW b2247 0.83 -1.4 2,359,226 + yfaW b2247 0.83 -1.1 2,359,230 - yfaW b2247 0.83 -0.8 2,359,439 - -0.4 2,359,439 - -3.0 2,359,442 + +0.5 2,359,442 + +1.2 2,359,482 - -1.6 2,359,514 + -0.4 2,359,514 + -0.1 2,359,686 - yfaX b2248 0.30 -2.0 2,359,778 + yfaX b2248 0.42 +0.2 2,359,778 + yfaX b2248 0.42 -1.1 2,359,907 + yfaX b2248 0.58 -0.6 2,360,320 - -1.1 2,360,320 - +0.6 2,360,432 - +0.4
Or see this region's nucleotide sequence