Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yeaK and b1788 are separated by 0 nucleotides b1788 and yeaL are separated by 169 nucleotides yeaL and yeaM overlap by 44 nucleotides yeaM and yeaN are separated by 96 nucleotides
b1787: yeaK - hypothetical protein (NCBI), at 1,871,598 to 1,872,101
yeaK
b1788: b1788 - orf, hypothetical protein (VIMSS), at 1,872,102 to 1,872,206
b1788
b1789: yeaL - conserved inner membrane protein (NCBI), at 1,872,376 to 1,872,822
yeaL
b1790: yeaM - predicted DNA-binding transcriptional regulator (NCBI), at 1,872,779 to 1,873,600
yeaM
b1791: yeaN - predicted transporter (NCBI), at 1,873,697 to 1,874,878
yeaN
Position (kb)
1872
1873
1874 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1871.790 kb on - strand, within yeaK at 1871.804 kb on - strand, within yeaK at 1871.823 kb on - strand, within yeaK at 1871.909 kb on - strand, within yeaK at 1871.909 kb on - strand, within yeaK at 1871.978 kb on - strand, within yeaK at 1872.285 kb on - strand at 1872.399 kb on - strand at 1872.443 kb on - strand, within yeaL at 1872.584 kb on + strand, within yeaL at 1872.606 kb on - strand, within yeaL at 1872.672 kb on - strand, within yeaL at 1872.672 kb on - strand, within yeaL at 1872.680 kb on + strand, within yeaL at 1872.680 kb on + strand, within yeaL at 1873.148 kb on + strand, within yeaM at 1873.370 kb on + strand, within yeaM at 1873.391 kb on - strand, within yeaM at 1873.472 kb on + strand, within yeaM at 1873.472 kb on + strand, within yeaM at 1873.510 kb on + strand, within yeaM at 1873.559 kb on - strand at 1873.744 kb on - strand at 1873.791 kb on + strand at 1873.799 kb on - strand at 1873.839 kb on - strand, within yeaN at 1873.888 kb on + strand, within yeaN at 1873.888 kb on + strand, within yeaN at 1874.141 kb on - strand, within yeaN at 1874.429 kb on - strand, within yeaN at 1874.429 kb on - strand, within yeaN at 1874.429 kb on - strand, within yeaN at 1874.429 kb on - strand, within yeaN at 1874.457 kb on - strand, within yeaN at 1874.518 kb on - strand, within yeaN
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.1 mg/ml remove 1,871,790 - yeaK b1787 0.38 -0.8 1,871,804 - yeaK b1787 0.41 -1.1 1,871,823 - yeaK b1787 0.45 +1.4 1,871,909 - yeaK b1787 0.62 -0.6 1,871,909 - yeaK b1787 0.62 -2.0 1,871,978 - yeaK b1787 0.75 +2.8 1,872,285 - +0.5 1,872,399 - -0.1 1,872,443 - yeaL b1789 0.15 +0.8 1,872,584 + yeaL b1789 0.47 +1.1 1,872,606 - yeaL b1789 0.51 -0.4 1,872,672 - yeaL b1789 0.66 -0.8 1,872,672 - yeaL b1789 0.66 +1.2 1,872,680 + yeaL b1789 0.68 -0.8 1,872,680 + yeaL b1789 0.68 -0.9 1,873,148 + yeaM b1790 0.45 -0.4 1,873,370 + yeaM b1790 0.72 +0.4 1,873,391 - yeaM b1790 0.74 +0.2 1,873,472 + yeaM b1790 0.84 -1.1 1,873,472 + yeaM b1790 0.84 -2.3 1,873,510 + yeaM b1790 0.89 -1.6 1,873,559 - +0.4 1,873,744 - +0.8 1,873,791 + -1.5 1,873,799 - -0.2 1,873,839 - yeaN b1791 0.12 +0.8 1,873,888 + yeaN b1791 0.16 +0.2 1,873,888 + yeaN b1791 0.16 +1.2 1,874,141 - yeaN b1791 0.38 +1.5 1,874,429 - yeaN b1791 0.62 +1.2 1,874,429 - yeaN b1791 0.62 +0.2 1,874,429 - yeaN b1791 0.62 -0.4 1,874,429 - yeaN b1791 0.62 -1.0 1,874,457 - yeaN b1791 0.64 +2.2 1,874,518 - yeaN b1791 0.69 +2.2
Or see this region's nucleotide sequence