Strain Fitness in Escherichia coli BW25113 around b1511
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,595,679 | - | -2.0 | |||
| 1,595,679 | - | -1.8 | |||
| 1,595,744 | - | +0.3 | |||
| 1,595,771 | - | +0.1 | |||
| 1,595,948 | + | -1.3 | |||
| 1,596,420 | + | +1.7 | |||
| 1,596,625 | - | +0.2 | |||
| 1,596,625 | - | +0.2 | |||
| 1,596,647 | - | +1.8 | |||
| 1,596,647 | - | +0.6 | |||
| 1,596,647 | - | +0.8 | |||
| 1,596,684 | - | +0.8 | |||
| 1,596,684 | - | -0.6 | |||
| 1,596,684 | - | -0.6 | |||
| 1,596,703 | - | -1.4 | |||
| 1,596,866 | + | ydeV | b1511 | 0.14 | +2.1 |
| 1,597,121 | - | ydeV | b1511 | 0.30 | +2.4 |
| 1,597,151 | + | ydeV | b1511 | 0.32 | +0.8 |
| 1,597,556 | - | ydeV | b1511 | 0.57 | -0.4 |
| 1,597,602 | + | ydeV | b1511 | 0.60 | +0.4 |
| 1,598,188 | - | -2.5 | |||
| 1,598,354 | - | +0.2 | |||
| 1,598,354 | - | -1.2 | |||
| 1,598,443 | + | lsrR | b1512 | 0.14 | +0.4 |
| 1,598,582 | + | lsrR | b1512 | 0.28 | +1.0 |
| 1,598,950 | + | lsrR | b1512 | 0.67 | +0.2 |
| 1,598,950 | + | lsrR | b1512 | 0.67 | -1.0 |
| 1,598,997 | - | lsrR | b1512 | 0.72 | -2.4 |
| 1,599,098 | - | lsrR | b1512 | 0.82 | -0.8 |
| 1,599,110 | - | lsrR | b1512 | 0.84 | +0.5 |
Or see this region's nucleotide sequence