Strain Fitness in Escherichia coli BW25113 around b1488
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,559,525 | - | ddpA | b1487 | 0.37 | -0.3 |
| 1,559,596 | - | ddpA | b1487 | 0.41 | -0.5 |
| 1,559,703 | - | ddpA | b1487 | 0.48 | -1.0 |
| 1,559,785 | - | ddpA | b1487 | 0.54 | -0.8 |
| 1,559,785 | - | ddpA | b1487 | 0.54 | +1.4 |
| 1,560,049 | - | ddpA | b1487 | 0.71 | +1.2 |
| 1,560,382 | - | -0.8 | |||
| 1,560,658 | - | ddpX | b1488 | 0.24 | -0.6 |
| 1,560,709 | + | ddpX | b1488 | 0.33 | -0.5 |
| 1,560,869 | - | ddpX | b1488 | 0.60 | +0.2 |
| 1,560,911 | + | ddpX | b1488 | 0.67 | -1.7 |
| 1,561,147 | - | +0.7 | |||
| 1,561,147 | - | -0.4 | |||
| 1,561,159 | - | -0.2 | |||
| 1,561,463 | - | +1.2 | |||
| 1,561,645 | - | b1489 | b1489 | 0.12 | -0.4 |
| 1,561,695 | + | b1489 | b1489 | 0.14 | +1.2 |
| 1,561,695 | + | b1489 | b1489 | 0.14 | -0.8 |
| 1,561,743 | - | b1489 | b1489 | 0.16 | +0.2 |
| 1,561,808 | - | b1489 | b1489 | 0.19 | -1.6 |
| 1,561,808 | - | b1489 | b1489 | 0.19 | +0.2 |
Or see this region's nucleotide sequence