Strain Fitness in Escherichia coli BW25113 around b1301
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,361,262 | - | puuC | b1300 | 0.33 | +1.5 |
| 1,361,563 | - | puuC | b1300 | 0.53 | +1.2 |
| 1,361,674 | - | puuC | b1300 | 0.61 | -1.4 |
| 1,361,727 | - | puuC | b1300 | 0.65 | +0.6 |
| 1,362,160 | + | +1.0 | |||
| 1,362,229 | - | +0.6 | |||
| 1,362,317 | + | +0.8 | |||
| 1,362,520 | + | puuB | b1301 | 0.21 | -0.4 |
| 1,362,664 | + | puuB | b1301 | 0.32 | +1.0 |
| 1,362,716 | - | puuB | b1301 | 0.36 | +0.4 |
| 1,362,757 | + | puuB | b1301 | 0.39 | +1.0 |
| 1,363,276 | + | puuB | b1301 | 0.80 | -0.7 |
| 1,363,284 | - | puuB | b1301 | 0.80 | -1.1 |
| 1,363,311 | + | puuB | b1301 | 0.82 | +0.5 |
| 1,363,311 | + | puuB | b1301 | 0.82 | +2.2 |
| 1,363,332 | - | puuB | b1301 | 0.84 | -0.6 |
| 1,363,341 | - | puuB | b1301 | 0.85 | -0.4 |
| 1,363,503 | + | +0.8 | |||
| 1,363,631 | - | -0.1 | |||
| 1,363,749 | - | puuE | b1302 | 0.14 | +1.2 |
| 1,363,749 | - | puuE | b1302 | 0.14 | +0.6 |
| 1,363,940 | - | puuE | b1302 | 0.29 | +2.3 |
| 1,363,993 | + | puuE | b1302 | 0.33 | -1.8 |
| 1,364,468 | + | puuE | b1302 | 0.71 | -1.1 |
Or see this region's nucleotide sequence