Strain Fitness in Escherichia coli BW25113 around b1251
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,307,613 | + | kch | b1250 | 0.46 | +2.8 |
1,307,613 | + | kch | b1250 | 0.46 | +2.0 |
1,307,620 | - | kch | b1250 | 0.46 | -2.9 |
1,307,820 | - | kch | b1250 | 0.62 | -2.2 |
1,307,827 | - | kch | b1250 | 0.63 | +0.8 |
1,307,895 | - | kch | b1250 | 0.68 | -0.3 |
1,307,994 | - | kch | b1250 | 0.76 | -0.5 |
1,307,994 | - | kch | b1250 | 0.76 | +0.5 |
1,308,003 | + | kch | b1250 | 0.77 | -1.9 |
1,308,045 | + | kch | b1250 | 0.80 | -0.5 |
1,308,061 | - | kch | b1250 | 0.81 | -1.1 |
1,308,061 | - | kch | b1250 | 0.81 | +0.7 |
1,308,068 | + | kch | b1250 | 0.82 | -0.1 |
1,308,103 | + | kch | b1250 | 0.85 | +1.4 |
1,308,110 | + | kch | b1250 | 0.85 | -1.5 |
1,308,256 | - | +0.6 | |||
1,308,285 | + | +0.4 | |||
1,308,298 | - | +0.6 | |||
1,308,300 | - | +0.7 | |||
1,308,380 | + | +1.3 | |||
1,308,656 | - | yciI | b1251 | 0.21 | +2.4 |
1,308,663 | - | yciI | b1251 | 0.24 | +3.8 |
1,308,679 | - | yciI | b1251 | 0.29 | +2.1 |
1,308,679 | - | yciI | b1251 | 0.29 | -1.3 |
1,308,732 | + | yciI | b1251 | 0.47 | -0.3 |
1,308,741 | - | yciI | b1251 | 0.50 | +1.3 |
1,308,744 | + | yciI | b1251 | 0.51 | -0.3 |
1,308,744 | + | yciI | b1251 | 0.51 | +1.6 |
1,309,193 | + | tonB | b1252 | 0.11 | +0.3 |
1,309,201 | - | tonB | b1252 | 0.12 | -1.3 |
1,309,201 | - | tonB | b1252 | 0.12 | -1.1 |
1,309,201 | - | tonB | b1252 | 0.12 | -1.1 |
1,309,474 | + | tonB | b1252 | 0.50 | -1.1 |
1,309,533 | - | tonB | b1252 | 0.58 | +1.7 |
1,309,533 | - | tonB | b1252 | 0.58 | -1.1 |
1,309,610 | + | tonB | b1252 | 0.69 | +0.7 |
1,309,705 | - | tonB | b1252 | 0.82 | -0.3 |
1,309,705 | - | tonB | b1252 | 0.82 | -0.3 |
Or see this region's nucleotide sequence