Strain Fitness in Escherichia coli BW25113 around b0931
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
988,280 | - | +0.2 | |||
988,301 | + | -0.5 | |||
988,411 | + | +0.9 | |||
988,419 | - | +1.5 | |||
988,419 | - | -1.1 | |||
988,494 | + | +0.2 | |||
988,500 | - | pncB | b0931 | 0.10 | -0.4 |
988,654 | + | +1.2 | |||
988,670 | - | pncB | b0931 | 0.24 | -0.4 |
988,752 | - | pncB | b0931 | 0.31 | +2.7 |
988,752 | - | pncB | b0931 | 0.31 | -1.1 |
988,819 | + | pncB | b0931 | 0.37 | +1.8 |
988,819 | + | pncB | b0931 | 0.37 | -0.0 |
988,883 | + | pncB | b0931 | 0.42 | +1.2 |
989,105 | - | pncB | b0931 | 0.61 | -0.6 |
989,105 | - | pncB | b0931 | 0.61 | +1.2 |
989,167 | + | pncB | b0931 | 0.66 | +1.9 |
989,401 | + | pncB | b0931 | 0.85 | +0.2 |
989,401 | + | pncB | b0931 | 0.85 | -1.1 |
989,403 | - | pncB | b0931 | 0.85 | -1.4 |
989,445 | + | pncB | b0931 | 0.89 | +1.4 |
989,445 | + | pncB | b0931 | 0.89 | -0.7 |
989,493 | - | +1.4 | |||
989,493 | - | -0.2 | |||
989,541 | - | -0.8 | |||
989,541 | - | -1.8 | |||
989,718 | + | -1.1 | |||
989,726 | - | +0.2 | |||
989,726 | - | +0.4 | |||
989,771 | + | +2.2 | |||
989,771 | + | -1.9 | |||
989,771 | + | +0.4 | |||
989,798 | + | +1.4 | |||
989,809 | - | -0.2 | |||
989,810 | + | +2.0 | |||
989,819 | - | -1.8 | |||
989,819 | - | -1.1 | |||
989,828 | - | -0.4 | |||
990,041 | + | +0.4 | |||
990,059 | - | -2.2 | |||
990,142 | - | pepN | b0932 | 0.11 | +0.6 |
990,147 | + | pepN | b0932 | 0.12 | -1.2 |
990,147 | + | pepN | b0932 | 0.12 | -2.1 |
990,201 | + | pepN | b0932 | 0.14 | +3.9 |
990,209 | - | pepN | b0932 | 0.14 | +1.2 |
990,209 | - | pepN | b0932 | 0.14 | -1.6 |
990,357 | + | pepN | b0932 | 0.20 | -0.1 |
990,357 | + | pepN | b0932 | 0.20 | +1.2 |
990,433 | - | pepN | b0932 | 0.23 | -0.8 |
990,433 | - | pepN | b0932 | 0.23 | -0.4 |
990,499 | + | pepN | b0932 | 0.25 | -0.4 |
990,554 | + | pepN | b0932 | 0.27 | -1.9 |
990,554 | + | pepN | b0932 | 0.27 | +0.6 |
Or see this region's nucleotide sequence