Strain Fitness in Escherichia coli BW25113 around b0775
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
807,591 | + | bioA | b0774 | 0.31 | +0.7 |
807,597 | - | bioA | b0774 | 0.31 | -0.8 |
807,607 | - | bioA | b0774 | 0.32 | -0.4 |
807,720 | + | bioA | b0774 | 0.41 | +0.2 |
807,720 | + | bioA | b0774 | 0.41 | -0.4 |
807,848 | - | bioA | b0774 | 0.51 | +1.2 |
807,982 | - | bioA | b0774 | 0.61 | +0.6 |
807,995 | + | bioA | b0774 | 0.62 | +1.2 |
808,019 | - | bioA | b0774 | 0.64 | -0.6 |
808,050 | - | bioA | b0774 | 0.67 | -2.0 |
808,307 | + | bioA | b0774 | 0.87 | -0.8 |
808,337 | + | bioA | b0774 | 0.89 | +0.4 |
808,401 | - | -1.7 | |||
808,428 | + | -1.2 | |||
808,428 | + | +3.7 | |||
808,684 | + | bioB | b0775 | 0.11 | +3.0 |
808,904 | - | bioB | b0775 | 0.32 | -0.7 |
808,915 | + | bioB | b0775 | 0.33 | +1.5 |
808,949 | + | bioB | b0775 | 0.37 | -0.3 |
808,964 | + | bioB | b0775 | 0.38 | -2.1 |
809,074 | + | bioB | b0775 | 0.49 | +0.6 |
809,082 | - | bioB | b0775 | 0.49 | +0.3 |
809,217 | - | bioB | b0775 | 0.62 | +0.2 |
809,217 | - | bioB | b0775 | 0.62 | +2.2 |
809,233 | + | bioB | b0775 | 0.64 | +1.9 |
809,379 | + | bioB | b0775 | 0.78 | +1.2 |
809,723 | + | bioF | b0776 | 0.10 | +1.0 |
809,993 | + | bioF | b0776 | 0.34 | -0.4 |
809,993 | + | bioF | b0776 | 0.34 | -0.2 |
810,237 | + | bioF | b0776 | 0.55 | +0.6 |
810,237 | + | bioF | b0776 | 0.55 | -1.8 |
810,359 | + | bioF | b0776 | 0.65 | -1.3 |
810,362 | - | bioF | b0776 | 0.66 | -0.6 |
810,393 | - | bioF | b0776 | 0.68 | -2.1 |
810,414 | + | bioF | b0776 | 0.70 | +1.5 |
810,492 | + | bioF | b0776 | 0.77 | +1.2 |
810,492 | + | bioF | b0776 | 0.77 | -0.4 |
Or see this region's nucleotide sequence