Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ybaT and cueR are separated by 124 nucleotides cueR and ybbJ are separated by 0 nucleotides ybbJ and ybbK overlap by 4 nucleotides ybbK and ybbL are separated by 145 nucleotides ybbL and ybbM overlap by 14 nucleotides
b0486: ybaT - predicted transporter (NCBI), at 511,800 to 513,092
ybaT
b0487: cueR - DNA-binding transcriptional activator of copper-responsive regulon genes (NCBI), at 513,217 to 513,624
cueR
b0488: ybbJ - conserved inner membrane protein (RefSeq), at 513,625 to 514,083
ybbJ
b0489: ybbK - predicted protease, membrane anchored (NCBI), at 514,080 to 514,997
ybbK
b0490: ybbL - predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI), at 515,143 to 515,820
ybbL
b0491: ybbM - putative metal resistance protein (VIMSS), at 515,807 to 516,586
ybbM
Position (kb) 514
515 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 513.095 kb on - strand at 513.107 kb on + strand at 513.109 kb on + strand at 513.182 kb on + strand at 513.205 kb on - strand at 513.287 kb on - strand, within cueR at 513.295 kb on - strand, within cueR at 513.431 kb on - strand, within cueR at 513.480 kb on + strand, within cueR at 513.537 kb on - strand, within cueR at 513.537 kb on - strand, within cueR at 513.700 kb on - strand, within ybbJ at 513.728 kb on - strand, within ybbJ at 513.742 kb on + strand, within ybbJ at 513.742 kb on + strand, within ybbJ at 513.949 kb on - strand, within ybbJ at 513.949 kb on - strand, within ybbJ at 513.958 kb on + strand, within ybbJ at 513.958 kb on + strand, within ybbJ at 513.977 kb on + strand, within ybbJ at 514.116 kb on - strand at 514.116 kb on - strand at 514.118 kb on - strand at 514.118 kb on - strand at 514.129 kb on - strand at 514.133 kb on - strand at 514.133 kb on - strand at 514.142 kb on + strand at 514.142 kb on + strand at 514.185 kb on + strand, within ybbK at 514.473 kb on - strand, within ybbK at 514.546 kb on - strand, within ybbK at 514.636 kb on - strand, within ybbK at 514.645 kb on + strand at 514.653 kb on - strand, within ybbK at 514.653 kb on - strand, within ybbK at 514.662 kb on + strand, within ybbK at 514.697 kb on + strand, within ybbK at 514.806 kb on - strand, within ybbK at 514.851 kb on - strand, within ybbK at 514.853 kb on + strand, within ybbK at 514.853 kb on + strand, within ybbK at 514.863 kb on - strand, within ybbK at 514.863 kb on - strand, within ybbK at 514.907 kb on - strand at 514.907 kb on - strand at 514.959 kb on - strand at 515.010 kb on + strand at 515.018 kb on - strand at 515.018 kb on - strand at 515.018 kb on - strand at 515.020 kb on + strand at 515.020 kb on + strand at 515.020 kb on + strand at 515.021 kb on + strand at 515.021 kb on + strand at 515.055 kb on + strand at 515.184 kb on - strand at 515.187 kb on + strand at 515.313 kb on + strand, within ybbL at 515.313 kb on + strand, within ybbL at 515.332 kb on - strand, within ybbL at 515.344 kb on + strand, within ybbL at 515.360 kb on - strand, within ybbL at 515.360 kb on - strand, within ybbL at 515.373 kb on + strand, within ybbL at 515.385 kb on + strand, within ybbL at 515.391 kb on + strand, within ybbL at 515.391 kb on + strand, within ybbL at 515.399 kb on - strand, within ybbL at 515.399 kb on - strand, within ybbL at 515.400 kb on + strand, within ybbL at 515.400 kb on + strand, within ybbL at 515.402 kb on + strand, within ybbL at 515.408 kb on - strand, within ybbL at 515.410 kb on - strand, within ybbL at 515.413 kb on - strand, within ybbL at 515.414 kb on - strand, within ybbL at 515.431 kb on + strand, within ybbL at 515.434 kb on - strand, within ybbL at 515.439 kb on - strand, within ybbL at 515.450 kb on + strand, within ybbL at 515.473 kb on + strand, within ybbL at 515.474 kb on + strand, within ybbL at 515.474 kb on + strand, within ybbL at 515.549 kb on - strand, within ybbL at 515.553 kb on + strand, within ybbL at 515.661 kb on + strand, within ybbL at 515.661 kb on + strand, within ybbL at 515.710 kb on + strand, within ybbL at 515.715 kb on + strand, within ybbL at 515.718 kb on - strand, within ybbL at 515.718 kb on - strand, within ybbL at 515.754 kb on + strand at 515.768 kb on + strand at 515.768 kb on + strand at 515.770 kb on + strand at 515.783 kb on + strand at 515.783 kb on + strand at 515.803 kb on + strand at 515.803 kb on + strand at 515.845 kb on + strand at 515.846 kb on + strand at 515.847 kb on + strand at 515.847 kb on + strand at 515.847 kb on + strand at 515.847 kb on + strand at 515.852 kb on + strand at 515.852 kb on + strand at 515.853 kb on + strand at 515.853 kb on + strand at 515.872 kb on + strand at 515.907 kb on + strand, within ybbM at 515.947 kb on + strand, within ybbM at 515.982 kb on + strand, within ybbM at 515.987 kb on + strand, within ybbM at 515.991 kb on + strand, within ybbM at 515.991 kb on + strand, within ybbM
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.1 mg/ml remove 513,095 - +0.9 513,107 + +2.3 513,109 + -1.6 513,182 + -2.5 513,205 - -0.8 513,287 - cueR b0487 0.17 +0.3 513,295 - cueR b0487 0.19 -0.3 513,431 - cueR b0487 0.52 +1.0 513,480 + cueR b0487 0.64 -1.1 513,537 - cueR b0487 0.78 +1.3 513,537 - cueR b0487 0.78 -0.9 513,700 - ybbJ b0488 0.16 -1.4 513,728 - ybbJ b0488 0.22 +1.4 513,742 + ybbJ b0488 0.25 -1.7 513,742 + ybbJ b0488 0.25 -0.5 513,949 - ybbJ b0488 0.71 +2.3 513,949 - ybbJ b0488 0.71 +0.7 513,958 + ybbJ b0488 0.73 -1.3 513,958 + ybbJ b0488 0.73 -1.9 513,977 + ybbJ b0488 0.77 -0.8 514,116 - -1.4 514,116 - +0.3 514,118 - +0.3 514,118 - -1.7 514,129 - +0.5 514,133 - -0.1 514,133 - -0.7 514,142 + +0.4 514,142 + -0.7 514,185 + ybbK b0489 0.11 -0.5 514,473 - ybbK b0489 0.43 -1.5 514,546 - ybbK b0489 0.51 -0.7 514,636 - ybbK b0489 0.61 -2.3 514,645 + +0.3 514,653 - ybbK b0489 0.62 +1.3 514,653 - ybbK b0489 0.62 -1.2 514,662 + ybbK b0489 0.63 +1.9 514,697 + ybbK b0489 0.67 +2.1 514,806 - ybbK b0489 0.79 -1.0 514,851 - ybbK b0489 0.84 -1.2 514,853 + ybbK b0489 0.84 -2.1 514,853 + ybbK b0489 0.84 +0.6 514,863 - ybbK b0489 0.85 -1.5 514,863 - ybbK b0489 0.85 -1.6 514,907 - +1.7 514,907 - +0.7 514,959 - +0.3 515,010 + -0.9 515,018 - -1.9 515,018 - -2.1 515,018 - -1.5 515,020 + +0.7 515,020 + +3.3 515,020 + -1.1 515,021 + -0.4 515,021 + +0.3 515,055 + +1.4 515,184 - +0.3 515,187 + +0.4 515,313 + ybbL b0490 0.25 +2.8 515,313 + ybbL b0490 0.25 -0.9 515,332 - ybbL b0490 0.28 -0.4 515,344 + ybbL b0490 0.30 +0.3 515,360 - ybbL b0490 0.32 +1.0 515,360 - ybbL b0490 0.32 -1.3 515,373 + ybbL b0490 0.34 +0.4 515,385 + ybbL b0490 0.36 -2.2 515,391 + ybbL b0490 0.37 +1.3 515,391 + ybbL b0490 0.37 +3.6 515,399 - ybbL b0490 0.38 +2.3 515,399 - ybbL b0490 0.38 -0.7 515,400 + ybbL b0490 0.38 +0.5 515,400 + ybbL b0490 0.38 -1.5 515,402 + ybbL b0490 0.38 +1.3 515,408 - ybbL b0490 0.39 -2.3 515,410 - ybbL b0490 0.39 -0.3 515,413 - ybbL b0490 0.40 -2.6 515,414 - ybbL b0490 0.40 -0.3 515,431 + ybbL b0490 0.42 +2.9 515,434 - ybbL b0490 0.43 -0.3 515,439 - ybbL b0490 0.44 -1.5 515,450 + ybbL b0490 0.45 +0.8 515,473 + ybbL b0490 0.49 +1.3 515,474 + ybbL b0490 0.49 -2.1 515,474 + ybbL b0490 0.49 -0.1 515,549 - ybbL b0490 0.60 -1.9 515,553 + ybbL b0490 0.60 +2.3 515,661 + ybbL b0490 0.76 -0.1 515,661 + ybbL b0490 0.76 -0.9 515,710 + ybbL b0490 0.84 +1.3 515,715 + ybbL b0490 0.84 -0.0 515,718 - ybbL b0490 0.85 -0.7 515,718 - ybbL b0490 0.85 +2.1 515,754 + +1.3 515,768 + -0.2 515,768 + +1.1 515,770 + -0.7 515,783 + -2.6 515,783 + -0.1 515,803 + -1.2 515,803 + +3.4 515,845 + -0.0 515,846 + +0.3 515,847 + +0.8 515,847 + -0.7 515,847 + +0.4 515,847 + -0.1 515,852 + +0.3 515,852 + -0.5 515,853 + -0.5 515,853 + -2.2 515,872 + +0.7 515,907 + ybbM b0491 0.13 +1.3 515,947 + ybbM b0491 0.18 -1.7 515,982 + ybbM b0491 0.22 -1.7 515,987 + ybbM b0491 0.23 +0.9 515,991 + ybbM b0491 0.24 +3.1 515,991 + ybbM b0491 0.24 -1.3
Or see this region's nucleotide sequence