Strain Fitness in Escherichia coli BW25113 around b0230
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 249,077 | + | lfhA | b0229 | 0.42 | +0.6 |
| 249,103 | - | lfhA | b0229 | 0.43 | +0.7 |
| 249,388 | - | lfhA | b0229 | 0.60 | -0.5 |
| 249,432 | + | lfhA | b0229 | 0.63 | +1.6 |
| 249,572 | - | lfhA | b0229 | 0.71 | +0.6 |
| 249,572 | - | lfhA | b0229 | 0.71 | +1.6 |
| 249,594 | - | lfhA | b0229 | 0.72 | +2.2 |
| 249,687 | - | lfhA | b0229 | 0.78 | -1.0 |
| 249,744 | + | lfhA | b0229 | 0.81 | -0.4 |
| 250,046 | + | +1.3 | |||
| 250,049 | + | +0.5 | |||
| 250,049 | + | -1.3 | |||
| 250,295 | - | mbhA | b0230 | 0.29 | +0.3 |
| 250,295 | - | mbhA | b0230 | 0.29 | +0.6 |
| 250,355 | + | mbhA | b0230 | 0.37 | +0.3 |
| 250,374 | + | mbhA | b0230 | 0.40 | +2.6 |
| 250,389 | + | mbhA | b0230 | 0.42 | +1.3 |
| 250,426 | + | mbhA | b0230 | 0.47 | -0.3 |
| 250,442 | - | mbhA | b0230 | 0.49 | -2.3 |
| 250,473 | - | mbhA | b0230 | 0.53 | +0.6 |
| 250,501 | + | mbhA | b0230 | 0.57 | +0.9 |
| 250,559 | - | mbhA | b0230 | 0.64 | +3.0 |
| 250,594 | - | mbhA | b0230 | 0.69 | -0.8 |
| 250,697 | + | mbhA | b0230 | 0.83 | +1.1 |
| 250,718 | - | mbhA | b0230 | 0.85 | +4.6 |
| 250,718 | - | mbhA | b0230 | 0.85 | -1.3 |
| 250,729 | + | mbhA | b0230 | 0.87 | +1.3 |
| 250,959 | + | +2.3 | |||
| 250,988 | - | -0.3 | |||
| 251,129 | - | +4.3 | |||
| 251,129 | - | dinB | b0231 | 0.22 | -0.1 |
| 251,214 | + | dinB | b0231 | 0.30 | +0.6 |
| 251,240 | + | dinB | b0231 | 0.32 | -0.0 |
| 251,240 | + | dinB | b0231 | 0.32 | +0.7 |
| 251,240 | - | dinB | b0231 | 0.32 | -0.7 |
| 251,240 | - | dinB | b0231 | 0.32 | -1.4 |
| 251,255 | - | dinB | b0231 | 0.34 | -1.4 |
| 251,499 | - | dinB | b0231 | 0.57 | -1.7 |
| 251,499 | - | dinB | b0231 | 0.57 | +1.7 |
| 251,579 | - | dinB | b0231 | 0.64 | -1.5 |
| 251,662 | - | dinB | b0231 | 0.72 | +0.0 |
| 251,669 | + | dinB | b0231 | 0.73 | -1.4 |
| 251,803 | + | dinB | b0231 | 0.86 | -1.4 |
| 251,803 | + | dinB | b0231 | 0.86 | -0.3 |
| 251,818 | + | dinB | b0231 | 0.87 | -0.3 |
Or see this region's nucleotide sequence