Experiment: LB_plus_SM_buffer
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF433 and GFF434 are separated by 23 nucleotides GFF434 and GFF435 are separated by 11 nucleotides GFF435 and GFF436 are separated by 229 nucleotides
GFF433 - Putative chemotaxis protein, resembles cheA, at 155,009 to 155,941
GFF433
GFF434 - hypothetical protein, at 155,965 to 156,429
GFF434
GFF435 - 3-dehydro-L-gulonate 2-dehydrogenase (EC 1.1.1.130), at 156,441 to 157,439
GFF435
GFF436 - Transcriptional regulator, IclR family, at 157,669 to 158,469
GFF436
Position (kb) 156
157
158 Strain fitness (log2 ratio) -1
0
1 at 155.499 kb on - strand, within GFF433 at 155.622 kb on + strand, within GFF433 at 155.921 kb on - strand at 155.933 kb on - strand at 156.351 kb on + strand, within GFF434 at 156.376 kb on + strand, within GFF434 at 156.414 kb on + strand at 156.442 kb on + strand at 156.642 kb on + strand, within GFF435 at 156.643 kb on - strand, within GFF435 at 156.643 kb on - strand, within GFF435 at 156.923 kb on + strand, within GFF435 at 156.923 kb on + strand, within GFF435 at 156.923 kb on + strand, within GFF435 at 156.924 kb on - strand, within GFF435 at 156.927 kb on + strand, within GFF435 at 156.927 kb on + strand, within GFF435 at 157.045 kb on + strand, within GFF435 at 157.045 kb on + strand, within GFF435 at 157.104 kb on - strand, within GFF435 at 157.315 kb on + strand, within GFF435 at 157.403 kb on - strand at 157.417 kb on - strand at 157.810 kb on - strand, within GFF436 at 157.849 kb on + strand, within GFF436 at 158.037 kb on + strand, within GFF436 at 158.038 kb on - strand, within GFF436 at 158.092 kb on - strand, within GFF436 at 158.092 kb on - strand, within GFF436 at 158.101 kb on + strand, within GFF436 at 158.101 kb on + strand, within GFF436 at 158.128 kb on - strand, within GFF436 at 158.205 kb on + strand, within GFF436 at 158.205 kb on + strand, within GFF436 at 158.206 kb on - strand, within GFF436 at 158.230 kb on + strand, within GFF436 at 158.230 kb on + strand, within GFF436 at 158.231 kb on - strand, within GFF436 at 158.292 kb on - strand, within GFF436 at 158.305 kb on - strand, within GFF436 at 158.439 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_plus_SM_buffer remove 155,499 - GFF433 0.53 -0.4 155,622 + GFF433 0.66 +0.1 155,921 - +0.4 155,933 - +0.2 156,351 + GFF434 0.83 +0.1 156,376 + GFF434 0.88 -0.3 156,414 + -0.2 156,442 + -0.1 156,642 + GFF435 0.20 -0.1 156,643 - GFF435 0.20 +0.7 156,643 - GFF435 0.20 +1.2 156,923 + GFF435 0.48 -0.3 156,923 + GFF435 0.48 -0.0 156,923 + GFF435 0.48 +0.2 156,924 - GFF435 0.48 +0.5 156,927 + GFF435 0.49 +0.3 156,927 + GFF435 0.49 -0.1 157,045 + GFF435 0.60 +0.6 157,045 + GFF435 0.60 +0.0 157,104 - GFF435 0.66 +1.0 157,315 + GFF435 0.87 +0.0 157,403 - -0.3 157,417 - -0.9 157,810 - GFF436 0.18 -0.0 157,849 + GFF436 0.22 +0.2 158,037 + GFF436 0.46 +0.2 158,038 - GFF436 0.46 +0.5 158,092 - GFF436 0.53 +0.5 158,092 - GFF436 0.53 +0.4 158,101 + GFF436 0.54 -0.2 158,101 + GFF436 0.54 +0.5 158,128 - GFF436 0.57 -0.1 158,205 + GFF436 0.67 +0.6 158,205 + GFF436 0.67 -0.1 158,206 - GFF436 0.67 +0.9 158,230 + GFF436 0.70 +1.4 158,230 + GFF436 0.70 +0.5 158,231 - GFF436 0.70 +0.1 158,292 - GFF436 0.78 -0.1 158,305 - GFF436 0.79 +0.2 158,439 + +0.8
Or see this region's nucleotide sequence