Experiment: Glucuronamide (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS24725 and ABID97_RS24730 are separated by 16 nucleotides ABID97_RS24730 and ABID97_RS24735 are separated by 25 nucleotides
ABID97_RS24725: ABID97_RS24725 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, at 5,125,436 to 5,127,043
_RS24725
ABID97_RS24730: ABID97_RS24730 - Fis family transcriptional regulator, at 5,127,060 to 5,127,296
_RS24730
ABID97_RS24735: ABID97_RS24735 - tRNA dihydrouridine synthase DusB, at 5,127,322 to 5,128,380
_RS24735
Position (kb) 5127
5128 Strain fitness (log2 ratio) -1
0
1
2
3 at 5127.048 kb on + strand at 5127.061 kb on + strand at 5127.208 kb on + strand, within ABID97_RS24730 at 5127.208 kb on + strand, within ABID97_RS24730 at 5127.208 kb on + strand, within ABID97_RS24730 at 5127.247 kb on + strand, within ABID97_RS24730 at 5127.248 kb on - strand, within ABID97_RS24730 at 5127.248 kb on - strand, within ABID97_RS24730 at 5127.248 kb on - strand, within ABID97_RS24730 at 5127.502 kb on - strand, within ABID97_RS24735 at 5127.509 kb on + strand, within ABID97_RS24735 at 5127.509 kb on + strand, within ABID97_RS24735 at 5127.510 kb on - strand, within ABID97_RS24735 at 5127.510 kb on - strand, within ABID97_RS24735 at 5127.510 kb on - strand, within ABID97_RS24735 at 5127.510 kb on - strand, within ABID97_RS24735 at 5127.566 kb on + strand, within ABID97_RS24735 at 5127.566 kb on + strand, within ABID97_RS24735 at 5127.567 kb on - strand, within ABID97_RS24735 at 5127.567 kb on - strand, within ABID97_RS24735 at 5127.602 kb on - strand, within ABID97_RS24735 at 5127.602 kb on - strand at 5127.818 kb on + strand, within ABID97_RS24735 at 5127.819 kb on - strand, within ABID97_RS24735 at 5127.836 kb on + strand, within ABID97_RS24735 at 5127.837 kb on - strand, within ABID97_RS24735 at 5127.837 kb on - strand, within ABID97_RS24735 at 5128.121 kb on + strand, within ABID97_RS24735 at 5128.121 kb on + strand, within ABID97_RS24735 at 5128.121 kb on + strand, within ABID97_RS24735 at 5128.122 kb on - strand, within ABID97_RS24735 at 5128.122 kb on - strand, within ABID97_RS24735 at 5128.122 kb on - strand, within ABID97_RS24735
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (C) remove 5,127,048 + +0.1 5,127,061 + -0.1 5,127,208 + ABID97_RS24730 0.62 +0.4 5,127,208 + ABID97_RS24730 0.62 +0.8 5,127,208 + ABID97_RS24730 0.62 -0.6 5,127,247 + ABID97_RS24730 0.79 -1.1 5,127,248 - ABID97_RS24730 0.79 -0.6 5,127,248 - ABID97_RS24730 0.79 +0.8 5,127,248 - ABID97_RS24730 0.79 +0.9 5,127,502 - ABID97_RS24735 0.17 +0.3 5,127,509 + ABID97_RS24735 0.18 +0.7 5,127,509 + ABID97_RS24735 0.18 -0.9 5,127,510 - ABID97_RS24735 0.18 +1.0 5,127,510 - ABID97_RS24735 0.18 +0.0 5,127,510 - ABID97_RS24735 0.18 -0.1 5,127,510 - ABID97_RS24735 0.18 +2.0 5,127,566 + ABID97_RS24735 0.23 -1.0 5,127,566 + ABID97_RS24735 0.23 +0.5 5,127,567 - ABID97_RS24735 0.23 +0.2 5,127,567 - ABID97_RS24735 0.23 +0.7 5,127,602 - ABID97_RS24735 0.26 +0.5 5,127,602 - +2.9 5,127,818 + ABID97_RS24735 0.47 +0.9 5,127,819 - ABID97_RS24735 0.47 +0.9 5,127,836 + ABID97_RS24735 0.49 -0.8 5,127,837 - ABID97_RS24735 0.49 -1.4 5,127,837 - ABID97_RS24735 0.49 +0.4 5,128,121 + ABID97_RS24735 0.75 -0.1 5,128,121 + ABID97_RS24735 0.75 -0.7 5,128,121 + ABID97_RS24735 0.75 -0.5 5,128,122 - ABID97_RS24735 0.76 +0.0 5,128,122 - ABID97_RS24735 0.76 +0.0 5,128,122 - ABID97_RS24735 0.76 +2.1
Or see this region's nucleotide sequence